RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 KLHDC4Q8TBB5 520 aa6.49□□□□□ -1.37
SF3B3-213ENST00000569687 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.49□□□□□ -1.37
SF3B3-213ENST00000569687 TTC14Q96N46 770 aa6.49□□□□□ -1.37
SF3B3-213ENST00000569687 HAUS7Q99871 368 aa6.49□□□□□ -1.37
SF3B3-213ENST00000569687 ZSWIM6Q9HCJ5 1215 aa6.49□□□□□ -1.37
SF3B3-213ENST00000569687 GPHNQ9NQX3 736 aaPredicted RBP6.49□□□□□ -1.37
SF3B3-213ENST00000569687 DBNLQ9UJU6 430 aaKnown RBP6.49□□□□□ -1.37
SF3B3-213ENST00000569687 TOGARAM1Q9Y4F4 1720 aa6.49□□□□□ -1.37
SF3B3-213ENST00000569687 MAP3K15Q6ZN16 1313 aa6.49□□□□□ -1.37
SF3B3-213ENST00000569687 CDHR2Q9BYE9 1310 aa6.49□□□□□ -1.37
SF3B3-213ENST00000569687 BAG4O95429 457 aaKnown RBP6.48□□□□□ -1.37
SF3B3-213ENST00000569687 IL6STP40189 918 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-213ENST00000569687 PTH1RQ03431 593 aa6.48□□□□□ -1.37
SF3B3-213ENST00000569687 USPL1Q5W0Q7 1092 aa6.48□□□□□ -1.37
SF3B3-213ENST00000569687 GIGYF2Q6Y7W6 1299 aaKnown RBP6.48□□□□□ -1.37
SF3B3-213ENST00000569687 KIF6Q6ZMV9 814 aa6.48□□□□□ -1.37
SF3B3-213ENST00000569687 ZBTB38Q8NAP3 1195 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-213ENST00000569687 JARID2Q92833 1246 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-213ENST00000569687 ZSCAN31Q96LW9 406 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-213ENST00000569687 SLC4A9Q96Q91 983 aa6.48□□□□□ -1.37
SF3B3-213ENST00000569687 SIL1Q9H173 461 aa6.48□□□□□ -1.37
SF3B3-213ENST00000569687 BOLA2Q9H3K6 86 aa6.48□□□□□ -1.37
SF3B3-213ENST00000569687 USP21Q9UK80 565 aa6.48□□□□□ -1.37
SF3B3-213ENST00000569687 ISY1Q9ULR0 285 aaKnown RBP6.48□□□□□ -1.37
SF3B3-213ENST00000569687 ZDHHC9Q9Y397 364 aa6.48□□□□□ -1.37
SF3B3-213ENST00000569687 CCDC9Q9Y3X0 531 aaKnown RBP6.48□□□□□ -1.37
SF3B3-213ENST00000569687 LAMB4A4D0S4 1761 aa6.48□□□□□ -1.37
SF3B3-213ENST00000569687 ATRNO75882 1429 aa6.48□□□□□ -1.37
SF3B3-213ENST00000569687 THSD7AQ9UPZ6 1657 aa6.47□□□□□ -1.37
SF3B3-213ENST00000569687 FSD2A1L4K1 749 aa6.47□□□□□ -1.37
SF3B3-213ENST00000569687 GOLGA6L22H0YM25 854 aa6.47□□□□□ -1.37
SF3B3-213ENST00000569687 TAF5LO75529 589 aa6.47□□□□□ -1.37
SF3B3-213ENST00000569687 BRD1O95696 1058 aa6.47□□□□□ -1.37
SF3B3-213ENST00000569687 PDIA4P13667 645 aaKnown RBP6.47□□□□□ -1.37
SF3B3-213ENST00000569687 SSFA2P28290 1259 aa6.47□□□□□ -1.37
SF3B3-213ENST00000569687 PRIM1P49642 420 aaKnown RBP6.47□□□□□ -1.37
SF3B3-213ENST00000569687 NMIQ13287 307 aaPredicted RBP6.47□□□□□ -1.37
SF3B3-213ENST00000569687 DDB1Q16531 1140 aa6.47□□□□□ -1.37
SF3B3-213ENST00000569687 VPS53Q5VIR6 699 aa6.47□□□□□ -1.37
SF3B3-213ENST00000569687 NLRP10Q86W26 655 aa6.47□□□□□ -1.37
SF3B3-213ENST00000569687 ZNF34Q8IZ26 560 aa6.47□□□□□ -1.37
SF3B3-213ENST00000569687 TMEM106CQ9BVX2 250 aa6.47□□□□□ -1.37
SF3B3-213ENST00000569687 ZBTB3Q9H5J0 574 aa6.47□□□□□ -1.37
SF3B3-213ENST00000569687 TLR7Q9NYK1 1049 aaKnown RBP6.47□□□□□ -1.37
SF3B3-213ENST00000569687 LIMCH1Q9UPQ0 1083 aa6.47□□□□□ -1.37
SF3B3-213ENST00000569687 AKAP2Q9Y2D5 859 aa6.47□□□□□ -1.37
SF3B3-213ENST00000569687 AFF2P51816 1311 aa6.47□□□□□ -1.37
SF3B3-213ENST00000569687 CCDC171Q6TFL3 1326 aa6.47□□□□□ -1.37
SF3B3-213ENST00000569687 MED23Q9ULK4 1368 aa6.46□□□□□ -1.37
SF3B3-213ENST00000569687 ZKSCAN1P17029 563 aaPredicted RBP6.46□□□□□ -1.38
SF3B3-213ENST00000569687 PSMA5P28066 241 aa6.46□□□□□ -1.38
SF3B3-213ENST00000569687 EIF5P55010 431 aaKnown RBP6.46□□□□□ -1.38
SF3B3-213ENST00000569687 FAM98CQ17RN3 349 aaKnown RBP6.46□□□□□ -1.38
SF3B3-213ENST00000569687 CCDC57Q2TAC2 916 aa6.46□□□□□ -1.38
SF3B3-213ENST00000569687 L1TD1Q5T7N2 865 aaKnown RBP6.46□□□□□ -1.38
SF3B3-213ENST00000569687 RNF20Q5VTR2 975 aa6.46□□□□□ -1.38
SF3B3-213ENST00000569687 CREB3L3Q68CJ9 461 aa6.46□□□□□ -1.38
SF3B3-213ENST00000569687 RUFY3Q7L099 469 aa6.46□□□□□ -1.38
SF3B3-213ENST00000569687 ZGPATQ8N5A5 531 aaKnown RBP6.46□□□□□ -1.38
SF3B3-213ENST00000569687 KBTBD3Q8NAB2 608 aa6.46□□□□□ -1.38
SF3B3-213ENST00000569687 CCDC102AQ96A19 550 aa6.46□□□□□ -1.38
SF3B3-213ENST00000569687 FAM227BQ96M60 508 aa6.46□□□□□ -1.38
SF3B3-213ENST00000569687 DBNDD2Q9BQY9 259 aa6.46□□□□□ -1.38
SF3B3-213ENST00000569687 FSD1Q9BTV5 496 aa6.46□□□□□ -1.38
SF3B3-213ENST00000569687 SH2B1Q9NRF2 756 aaPredicted RBP6.46□□□□□ -1.38
SF3B3-213ENST00000569687 HELLSQ9NRZ9 838 aa6.46□□□□□ -1.38
SF3B3-213ENST00000569687 HMG20BQ9P0W2 317 aa6.46□□□□□ -1.38
SF3B3-213ENST00000569687 CEP126Q9P2H0 1117 aa6.46□□□□□ -1.38
SF3B3-213ENST00000569687 RIPOR2Q9Y4F9 1068 aa6.46□□□□□ -1.38
SF3B3-213ENST00000569687 CYP46A1Q9Y6A2 500 aa6.46□□□□□ -1.38
SF3B3-213ENST00000569687 ARFGEF2Q9Y6D5 1785 aa6.46□□□□□ -1.38
SF3B3-213ENST00000569687 DOT1LQ8TEK3 1739 aa6.45□□□□□ -1.38
SF3B3-213ENST00000569687 IRF6O14896 467 aa6.45□□□□□ -1.38
SF3B3-213ENST00000569687 SLC27A2O14975 620 aa6.45□□□□□ -1.38
SF3B3-213ENST00000569687 TIMM10P62072 90 aa6.45□□□□□ -1.38
SF3B3-213ENST00000569687 DSG2Q14126 1118 aa6.45□□□□□ -1.38
SF3B3-213ENST00000569687 KRT32Q14532 448 aa6.45□□□□□ -1.38
SF3B3-213ENST00000569687 HLFQ16534 295 aa6.45□□□□□ -1.38
SF3B3-213ENST00000569687 KLHL40Q2TBA0 621 aa6.45□□□□□ -1.38
SF3B3-213ENST00000569687 MCMDC2Q4G0Z9 681 aa6.45□□□□□ -1.38
SF3B3-213ENST00000569687 LRRC24Q50LG9 513 aa6.45□□□□□ -1.38
SF3B3-213ENST00000569687 PRPF40BQ6NWY9 871 aaKnown RBP6.45□□□□□ -1.38
SF3B3-213ENST00000569687 INTS5Q6P9B9 1019 aaKnown RBP6.45□□□□□ -1.38
SF3B3-213ENST00000569687 MARCH10Q8NA82 808 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-213ENST00000569687 TTLL11Q8NHH1 800 aa6.45□□□□□ -1.38
SF3B3-213ENST00000569687 SMARCC1Q92922 1105 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-213ENST00000569687 ZNF512BQ96KM6 892 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-213ENST00000569687 GJD4Q96KN9 370 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-213ENST00000569687 UPF3BQ9BZI7 483 aaKnown RBP6.45□□□□□ -1.38
SF3B3-213ENST00000569687 PDRG1Q9NUG6 133 aa6.45□□□□□ -1.38
SF3B3-213ENST00000569687 LMBRD1Q9NUN5 540 aa6.45□□□□□ -1.38
SF3B3-213ENST00000569687 TRPC5Q9UL62 973 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-213ENST00000569687 RBM8AQ9Y5S9 174 aaKnown RBP6.45□□□□□ -1.38
SF3B3-213ENST00000569687 NUP188Q5SRE5 1749 aa6.45□□□□□ -1.38
SF3B3-213ENST00000569687 ABCC12Q96J65 1359 aa6.44□□□□□ -1.38
SF3B3-213ENST00000569687 A0A0D9SFI3 127 aa6.44□□□□□ -1.38
SF3B3-213ENST00000569687 A0A1B0GUL7 405 aa6.44□□□□□ -1.38
SF3B3-213ENST00000569687 AK2P54819 239 aa6.44□□□□□ -1.38
SF3B3-213ENST00000569687 MAP2K5Q13163 448 aa6.44□□□□□ -1.38
SF3B3-213ENST00000569687 IFIT5Q13325 482 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms