RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 ZNF594Q96JF6 807 aaPredicted RBP29.04■■■□□ 2.24
RAB40C-212ENST00000569575 MINPP1Q9UNW1 487 aa29.03■■■□□ 2.24
RAB40C-212ENST00000569575 RTKN2Q8IZC4 609 aa29.02■■■□□ 2.24
RAB40C-212ENST00000569575 PODXL2Q9NZ53 605 aa29.02■■■□□ 2.24
RAB40C-212ENST00000569575 TAF1P21675 1872 aa29.02■■■□□ 2.24
RAB40C-212ENST00000569575 SLX4Q8IY92 1834 aa29.01■■■□□ 2.24
RAB40C-212ENST00000569575 LRRC37AA6NMS7 1700 aa29.01■■■□□ 2.23
RAB40C-212ENST00000569575 OS9Q13438 667 aaPredicted RBP29.01■■■□□ 2.23
RAB40C-212ENST00000569575 ATG9AQ7Z3C6 839 aa29.01■■■□□ 2.23
RAB40C-212ENST00000569575 CEP126Q9P2H0 1117 aa29.01■■■□□ 2.23
RAB40C-212ENST00000569575 PA2G4Q9UQ80 394 aaKnown RBP29.01■■■□□ 2.23
RAB40C-212ENST00000569575 KLHDC4Q8TBB5 520 aa29■■■□□ 2.23
RAB40C-212ENST00000569575 KIF1BPQ96EK5 621 aa29■■■□□ 2.23
RAB40C-212ENST00000569575 GPR108Q9NPR9 543 aa29■■■□□ 2.23
RAB40C-212ENST00000569575 ARFGEF1Q9Y6D6 1849 aa28.99■■■□□ 2.23
RAB40C-212ENST00000569575 XDHP47989 1333 aa28.99■■■□□ 2.23
RAB40C-212ENST00000569575 CCDC93Q567U6 631 aa28.99■■■□□ 2.23
RAB40C-212ENST00000569575 SMC5Q8IY18 1101 aa28.99■■■□□ 2.23
RAB40C-212ENST00000569575 AKAP2Q9Y2D5 859 aa28.99■■■□□ 2.23
RAB40C-212ENST00000569575 LEMD3Q9Y2U8 911 aa28.99■■■□□ 2.23
RAB40C-212ENST00000569575 PDE8BO95263 885 aa28.98■■■□□ 2.23
RAB40C-212ENST00000569575 CHRNDQ07001 517 aa28.98■■■□□ 2.23
RAB40C-212ENST00000569575 LRRC24Q50LG9 513 aa28.98■■■□□ 2.23
RAB40C-212ENST00000569575 CCDC136Q96JN2 1154 aa28.98■■■□□ 2.23
RAB40C-212ENST00000569575 PUS3Q9BZE2 481 aaKnown RBP28.98■■■□□ 2.23
RAB40C-212ENST00000569575 SIL1Q9H173 461 aa28.98■■■□□ 2.23
RAB40C-212ENST00000569575 METTL24Q5JXM2 366 aa28.97■■■□□ 2.23
RAB40C-212ENST00000569575 MPNDQ8N594 471 aa28.97■■■□□ 2.23
RAB40C-212ENST00000569575 SUPT20HQ8NEM7 779 aa28.97■■■□□ 2.23
RAB40C-212ENST00000569575 VPS33BQ9H267 617 aa28.97■■■□□ 2.23
RAB40C-212ENST00000569575 BCS1LQ9Y276 419 aa28.97■■■□□ 2.23
RAB40C-212ENST00000569575 CACNA1SQ13698 1873 aa28.96■■■□□ 2.23
RAB40C-212ENST00000569575 ATP2B4P23634 1241 aa28.96■■■□□ 2.23
RAB40C-212ENST00000569575 UBE4AQ14139 1066 aa28.96■■■□□ 2.23
RAB40C-212ENST00000569575 ANKIB1Q9P2G1 1089 aa28.96■■■□□ 2.23
RAB40C-212ENST00000569575 EXOC6BQ9Y2D4 811 aa28.96■■■□□ 2.23
RAB40C-212ENST00000569575 SPEF2Q9C093 1822 aa28.96■■■□□ 2.23
RAB40C-212ENST00000569575 LRRCC1Q9C099 1032 aa28.95■■■□□ 2.22
RAB40C-212ENST00000569575 ZBTB47Q9UFB7 747 aaPredicted RBP28.95■■■□□ 2.22
RAB40C-212ENST00000569575 C21orf2O43822 256 aa28.94■■■□□ 2.22
RAB40C-212ENST00000569575 IGHDP01880 384 aa28.94■■■□□ 2.22
RAB40C-212ENST00000569575 CENPQQ7L2Z9 268 aaPredicted RBP28.94■■■□□ 2.22
RAB40C-212ENST00000569575 VGLL2Q8N8G2 317 aa28.94■■■□□ 2.22
RAB40C-212ENST00000569575 RHPN1Q8TCX5 695 aa28.94■■■□□ 2.22
RAB40C-212ENST00000569575 PSMD1Q99460 953 aa28.94■■■□□ 2.22
RAB40C-212ENST00000569575 RTFDC1Q9BY42 306 aaPredicted RBP28.94■■■□□ 2.22
RAB40C-212ENST00000569575 NSFL1CQ9UNZ2 370 aaKnown RBP28.94■■■□□ 2.22
RAB40C-212ENST00000569575 SASH1O94885 1247 aa28.93■■■□□ 2.22
RAB40C-212ENST00000569575 PUM3Q15397 648 aaKnown RBP28.93■■■□□ 2.22
RAB40C-212ENST00000569575 DPP8Q6V1X1 898 aaPredicted RBP28.93■■■□□ 2.22
RAB40C-212ENST00000569575 COL4A1P02462 1669 aa28.93■■■□□ 2.22
RAB40C-212ENST00000569575 CLASRPQ8N2M8 674 aaKnown RBP28.92■■■□□ 2.22
RAB40C-212ENST00000569575 GGA1Q9UJY5 639 aa28.92■■■□□ 2.22
RAB40C-212ENST00000569575 LTBP3Q9NS15 1303 aa28.92■■■□□ 2.22
RAB40C-212ENST00000569575 GRIN3BO60391 1043 aa28.91■■■□□ 2.22
RAB40C-212ENST00000569575 C15orf52Q6ZUT6 534 aaKnown RBP28.91■■■□□ 2.22
RAB40C-212ENST00000569575 LPIN2Q92539 896 aa28.91■■■□□ 2.22
RAB40C-212ENST00000569575 EYA3Q99504 573 aa28.91■■■□□ 2.22
RAB40C-212ENST00000569575 KCNJ4P48050 445 aa28.9■■■□□ 2.22
RAB40C-212ENST00000569575 GPSM2P81274 684 aa28.9■■■□□ 2.22
RAB40C-212ENST00000569575 TFCP2Q12800 502 aa28.9■■■□□ 2.22
RAB40C-212ENST00000569575 SNED1Q8TER0 1413 aa28.9■■■□□ 2.22
RAB40C-212ENST00000569575 ZNF804BA4D1E1 1349 aa28.9■■■□□ 2.22
RAB40C-212ENST00000569575 IFIT1P09914 478 aaKnown RBP28.89■■■□□ 2.22
RAB40C-212ENST00000569575 FGFR2P21802 821 aa28.88■■■□□ 2.21
RAB40C-212ENST00000569575 FKBP4Q02790 459 aaKnown RBP eCLIP28.88■■■□□ 2.21
RAB40C-212ENST00000569575 TBC1D16Q8TBP0 767 aa28.88■■■□□ 2.21
RAB40C-212ENST00000569575 LTBP1Q14766 1721 aa28.88■■■□□ 2.21
RAB40C-212ENST00000569575 A0A1B0GUL6 1792 aa28.88■■■□□ 2.21
RAB40C-212ENST00000569575 DCAF8L1A6NGE4 600 aa28.87■■■□□ 2.21
RAB40C-212ENST00000569575 SLC5A1P13866 664 aa28.87■■■□□ 2.21
RAB40C-212ENST00000569575 ATP2B3Q16720 1220 aa28.87■■■□□ 2.21
RAB40C-212ENST00000569575 KDM2BQ8NHM5 1336 aa28.87■■■□□ 2.21
RAB40C-212ENST00000569575 FER1L6Q2WGJ9 1857 aa28.87■■■□□ 2.21
RAB40C-212ENST00000569575 ZBTB22O15209 634 aa28.86■■■□□ 2.21
RAB40C-212ENST00000569575 TAF5LO75529 589 aa28.86■■■□□ 2.21
RAB40C-212ENST00000569575 TNNI3KQ59H18 835 aa28.86■■■□□ 2.21
RAB40C-212ENST00000569575 FPGT-TNNI3KV9GXZ4 949 aa28.86■■■□□ 2.21
RAB40C-212ENST00000569575 UFL1O94874 794 aa28.85■■■□□ 2.21
RAB40C-212ENST00000569575 HELBQ8NG08 1087 aaPredicted RBP28.85■■■□□ 2.21
RAB40C-212ENST00000569575 TAOK3Q9H2K8 898 aa28.85■■■□□ 2.21
RAB40C-212ENST00000569575 MED23Q9ULK4 1368 aa28.85■■■□□ 2.21
RAB40C-212ENST00000569575 C6orf229H3BNL8 230 aa28.84■■■□□ 2.21
RAB40C-212ENST00000569575 NUCB1Q02818 461 aa28.84■■■□□ 2.21
RAB40C-212ENST00000569575 ANKRD45Q5TZF3 282 aa28.84■■■□□ 2.21
RAB40C-212ENST00000569575 ZNF219Q9P2Y4 722 aaPredicted RBP28.84■■■□□ 2.21
RAB40C-212ENST00000569575 POLLQ9UGP5 575 aa28.84■■■□□ 2.21
RAB40C-212ENST00000569575 A0A1B0GUL7 405 aa28.83■■■□□ 2.21
RAB40C-212ENST00000569575 GPR162Q16538 588 aa28.83■■■□□ 2.21
RAB40C-212ENST00000569575 CAVIN4Q5BKX8 364 aa28.83■■■□□ 2.21
RAB40C-212ENST00000569575 ZC3H12CQ9C0D7 883 aaKnown RBP28.83■■■□□ 2.21
RAB40C-212ENST00000569575 WASHC4Q2M389 1173 aa28.82■■■□□ 2.2
RAB40C-212ENST00000569575 OLFM4Q6UX06 510 aa28.81■■■□□ 2.2
RAB40C-212ENST00000569575 CHD1LQ86WJ1 897 aa28.81■■■□□ 2.2
RAB40C-212ENST00000569575 ZNF609O15014 1411 aa28.8■■■□□ 2.2
RAB40C-212ENST00000569575 APBB1O00213 710 aa28.8■■■□□ 2.2
RAB40C-212ENST00000569575 IFIT2P09913 472 aaKnown RBP28.8■■■□□ 2.2
RAB40C-212ENST00000569575 KIAA2012Q0VF49 1180 aa28.8■■■□□ 2.2
RAB40C-212ENST00000569575 EAF2Q96CJ1 260 aaPredicted RBP28.8■■■□□ 2.2
RAB40C-212ENST00000569575 DUOX1Q9NRD9 1551 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms