RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 LMBR1LQ6UX01 489 aa17.43■□□□□ 0.38
HERPUD1-218ENST00000569569 GPC2Q8N158 579 aa17.43■□□□□ 0.38
HERPUD1-218ENST00000569569 TBC1D16Q8TBP0 767 aa17.43■□□□□ 0.38
HERPUD1-218ENST00000569569 L3MBTL3Q96JM7 780 aaPredicted RBP17.43■□□□□ 0.38
HERPUD1-218ENST00000569569 ZNRF3Q9ULT6 936 aa17.43■□□□□ 0.38
HERPUD1-218ENST00000569569 CHMP3Q9Y3E7 222 aa17.43■□□□□ 0.38
HERPUD1-218ENST00000569569 KIF16BQ96L93 1317 aa17.43■□□□□ 0.38
HERPUD1-218ENST00000569569 CCT4P50991 539 aaKnown RBP17.42■□□□□ 0.38
HERPUD1-218ENST00000569569 IFIT5Q13325 482 aaKnown RBP17.42■□□□□ 0.38
HERPUD1-218ENST00000569569 EPHA10Q5JZY3 1008 aa17.42■□□□□ 0.38
HERPUD1-218ENST00000569569 RBM46Q8TBY0 533 aaKnown RBP17.42■□□□□ 0.38
HERPUD1-218ENST00000569569 MPHOSPH8Q99549 860 aa17.42■□□□□ 0.38
HERPUD1-218ENST00000569569 GGA1Q9UJY5 639 aa17.42■□□□□ 0.38
HERPUD1-218ENST00000569569 MINPP1Q9UNW1 487 aa17.42■□□□□ 0.38
HERPUD1-218ENST00000569569 XDHP47989 1333 aa17.42■□□□□ 0.38
HERPUD1-218ENST00000569569 IQCA1LA6NCM1 817 aa17.41■□□□□ 0.38
HERPUD1-218ENST00000569569 RIMBP2O15034 1052 aa17.41■□□□□ 0.38
HERPUD1-218ENST00000569569 IPO8O15397 1037 aaKnown RBP17.41■□□□□ 0.38
HERPUD1-218ENST00000569569 SUCLG2Q96I99 432 aa17.41■□□□□ 0.38
HERPUD1-218ENST00000569569 ZC3H12CQ9C0D7 883 aaKnown RBP17.41■□□□□ 0.38
HERPUD1-218ENST00000569569 USP44Q9H0E7 712 aa17.41■□□□□ 0.38
HERPUD1-218ENST00000569569 BCAR3O75815 825 aa17.4■□□□□ 0.38
HERPUD1-218ENST00000569569 UFL1O94874 794 aa17.4■□□□□ 0.38
HERPUD1-218ENST00000569569 ATP2B4P23634 1241 aa17.4■□□□□ 0.38
HERPUD1-218ENST00000569569 CCDC57Q2TAC2 916 aa17.4■□□□□ 0.38
HERPUD1-218ENST00000569569 KAZALD1Q96I82 304 aa17.4■□□□□ 0.38
HERPUD1-218ENST00000569569 GJA3Q9Y6H8 435 aa17.4■□□□□ 0.38
HERPUD1-218ENST00000569569 CXCL9Q07325 125 aa17.39■□□□□ 0.37
HERPUD1-218ENST00000569569 TAF7LQ5H9L4 462 aa17.38■□□□□ 0.37
HERPUD1-218ENST00000569569 GPR101Q96P66 508 aaPredicted RBP17.38■□□□□ 0.37
HERPUD1-218ENST00000569569 ANKRD2Q9GZV1 360 aa17.38■□□□□ 0.37
HERPUD1-218ENST00000569569 HACL1Q9UJ83 578 aa17.38■□□□□ 0.37
HERPUD1-218ENST00000569569 A0A1B0GUL6 1792 aa17.38■□□□□ 0.37
HERPUD1-218ENST00000569569 SCN9AQ15858 1988 aa17.37■□□□□ 0.37
HERPUD1-218ENST00000569569 YDJCA8MPS7 323 aa17.37■□□□□ 0.37
HERPUD1-218ENST00000569569 G3V3G9 751 aa17.37■□□□□ 0.37
HERPUD1-218ENST00000569569 FSTL1Q12841 308 aa17.37■□□□□ 0.37
HERPUD1-218ENST00000569569 TNIP1Q15025 636 aa17.37■□□□□ 0.37
HERPUD1-218ENST00000569569 RABL6Q3YEC7 729 aaPredicted RBP17.37■□□□□ 0.37
HERPUD1-218ENST00000569569 DCAF8Q5TAQ9 597 aa17.37■□□□□ 0.37
HERPUD1-218ENST00000569569 CIAPIN1Q6FI81 312 aa17.37■□□□□ 0.37
HERPUD1-218ENST00000569569 ATF7IPQ6VMQ6 1270 aa17.37■□□□□ 0.37
HERPUD1-218ENST00000569569 SMC1BQ8NDV3 1235 aa17.37■□□□□ 0.37
HERPUD1-218ENST00000569569 FRAT1Q92837 279 aaPredicted RBP17.37■□□□□ 0.37
HERPUD1-218ENST00000569569 TAF1DQ9H5J8 278 aaPredicted RBP17.37■□□□□ 0.37
HERPUD1-218ENST00000569569 BICC1Q9H694 974 aaKnown RBP17.37■□□□□ 0.37
HERPUD1-218ENST00000569569 DBNDD1Q9H9R9 158 aa17.37■□□□□ 0.37
HERPUD1-218ENST00000569569 LEMD3Q9Y2U8 911 aa17.37■□□□□ 0.37
HERPUD1-218ENST00000569569 PSME4Q14997 1843 aa17.36■□□□□ 0.37
HERPUD1-218ENST00000569569 ECE2O60344 883 aa17.36■□□□□ 0.37
HERPUD1-218ENST00000569569 RAD17O75943 681 aa17.36■□□□□ 0.37
HERPUD1-218ENST00000569569 LMOD1P29536 600 aaPredicted RBP17.36■□□□□ 0.37
HERPUD1-218ENST00000569569 CHRNDQ07001 517 aa17.36■□□□□ 0.37
HERPUD1-218ENST00000569569 DOK7Q18PE1 504 aa17.36■□□□□ 0.37
HERPUD1-218ENST00000569569 INTS3Q68E01 1043 aaKnown RBP17.36■□□□□ 0.37
HERPUD1-218ENST00000569569 LDHAL6AQ6ZMR3 332 aa17.36■□□□□ 0.37
HERPUD1-218ENST00000569569 ZNF594Q96JF6 807 aaPredicted RBP17.36■□□□□ 0.37
HERPUD1-218ENST00000569569 HDAC5Q9UQL6 1122 aa17.36■□□□□ 0.37
HERPUD1-218ENST00000569569 TRIM27P14373 513 aa17.35■□□□□ 0.37
HERPUD1-218ENST00000569569 EPHX2P34913 555 aa17.35■□□□□ 0.37
HERPUD1-218ENST00000569569 ANKRD44Q8N8A2 993 aa17.35■□□□□ 0.37
HERPUD1-218ENST00000569569 ZNF804BA4D1E1 1349 aa17.34■□□□□ 0.37
HERPUD1-218ENST00000569569 WTIPA6NIX2 430 aaPredicted RBP17.34■□□□□ 0.37
HERPUD1-218ENST00000569569 UBTFL1P0CB47 393 aaPredicted RBP17.34■□□□□ 0.37
HERPUD1-218ENST00000569569 HSPA6P17066 643 aa17.34■□□□□ 0.37
HERPUD1-218ENST00000569569 SCNN1DP51172 638 aa17.34■□□□□ 0.37
HERPUD1-218ENST00000569569 ZKSCAN2Q63HK3 967 aa17.34■□□□□ 0.37
HERPUD1-218ENST00000569569 PNMA8AQ86V59 439 aaPredicted RBP17.34■□□□□ 0.37
HERPUD1-218ENST00000569569 CNNM1Q9NRU3 951 aa17.34■□□□□ 0.37
HERPUD1-218ENST00000569569 MED23Q9ULK4 1368 aa17.34■□□□□ 0.37
HERPUD1-218ENST00000569569 PODNQ7Z5L7 613 aa17.33■□□□□ 0.36
HERPUD1-218ENST00000569569 PSMD14O00487 310 aa17.32■□□□□ 0.36
HERPUD1-218ENST00000569569 TAF5LO75529 589 aa17.32■□□□□ 0.36
HERPUD1-218ENST00000569569 EPS15P42566 896 aa17.32■□□□□ 0.36
HERPUD1-218ENST00000569569 KCNJ4P48050 445 aa17.32■□□□□ 0.36
HERPUD1-218ENST00000569569 EAPPQ56P03 285 aaPredicted RBP17.32■□□□□ 0.36
HERPUD1-218ENST00000569569 CHADLQ6NUI6 762 aa17.32■□□□□ 0.36
HERPUD1-218ENST00000569569 LDHDQ86WU2 507 aa17.32■□□□□ 0.36
HERPUD1-218ENST00000569569 KCNQ5Q9NR82 932 aa17.32■□□□□ 0.36
HERPUD1-218ENST00000569569 GPRC5DQ9NZD1 345 aa17.32■□□□□ 0.36
HERPUD1-218ENST00000569569 GNAI3P08754 354 aa17.31■□□□□ 0.36
HERPUD1-218ENST00000569569 POTEIP0CG38 1075 aa17.31■□□□□ 0.36
HERPUD1-218ENST00000569569 POTEJP0CG39 1038 aa17.31■□□□□ 0.36
HERPUD1-218ENST00000569569 GMPSP49915 693 aaPredicted RBP17.31■□□□□ 0.36
HERPUD1-218ENST00000569569 HELBQ8NG08 1087 aaPredicted RBP17.31■□□□□ 0.36
HERPUD1-218ENST00000569569 CLUAP1Q96AJ1 413 aa17.31■□□□□ 0.36
HERPUD1-218ENST00000569569 TNNQ9UQP3 1299 aa17.31■□□□□ 0.36
HERPUD1-218ENST00000569569 ADAMTSL1Q8N6G6 1762 aa17.3■□□□□ 0.36
HERPUD1-218ENST00000569569 USP50Q70EL3 339 aaPredicted RBP17.3■□□□□ 0.36
HERPUD1-218ENST00000569569 TXNRD3Q86VQ6 643 aa17.3■□□□□ 0.36
HERPUD1-218ENST00000569569 DPF2Q92785 391 aa17.3■□□□□ 0.36
HERPUD1-218ENST00000569569 MEIS3Q99687 375 aa17.3■□□□□ 0.36
HERPUD1-218ENST00000569569 PUS3Q9BZE2 481 aaKnown RBP17.3■□□□□ 0.36
HERPUD1-218ENST00000569569 COA1Q9GZY4 146 aa17.3■□□□□ 0.36
HERPUD1-218ENST00000569569 ADARB2Q9NS39 739 aaKnown RBP17.3■□□□□ 0.36
HERPUD1-218ENST00000569569 CLEC11AQ9Y240 323 aa17.3■□□□□ 0.36
HERPUD1-218ENST00000569569 RIPOR2Q9Y4F9 1068 aa17.3■□□□□ 0.36
HERPUD1-218ENST00000569569 POLR2AP24928 1970 aaKnown RBP17.29■□□□□ 0.36
HERPUD1-218ENST00000569569 PLIN1O60240 522 aa17.29■□□□□ 0.36
HERPUD1-218ENST00000569569 VIL1P09327 827 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms