RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 LMOD1P29536 600 aaPredicted RBP9.99□□□□□ -0.81
CDH3-209ENST00000569080 WASHC4Q2M389 1173 aa9.99□□□□□ -0.81
CDH3-209ENST00000569080 FAM161AQ3B820 660 aa9.99□□□□□ -0.81
CDH3-209ENST00000569080 MAP1SQ66K74 1059 aaPredicted RBP9.99□□□□□ -0.81
CDH3-209ENST00000569080 ANKRD18AQ8IVF6 992 aa9.99□□□□□ -0.81
CDH3-209ENST00000569080 DBNDD1Q9H9R9 158 aa9.99□□□□□ -0.81
CDH3-209ENST00000569080 TRPM7Q96QT4 1865 aa9.99□□□□□ -0.81
CDH3-209ENST00000569080 WTIPA6NIX2 430 aaPredicted RBP9.98□□□□□ -0.81
CDH3-209ENST00000569080 E9PSI1 815 aa9.98□□□□□ -0.81
CDH3-209ENST00000569080 C6orf229H3BNL8 230 aa9.98□□□□□ -0.81
CDH3-209ENST00000569080 PSMD14O00487 310 aa9.98□□□□□ -0.81
CDH3-209ENST00000569080 ECE2O60344 883 aa9.98□□□□□ -0.81
CDH3-209ENST00000569080 UFL1O94874 794 aa9.98□□□□□ -0.81
CDH3-209ENST00000569080 CSF1RP07333 972 aa9.98□□□□□ -0.81
CDH3-209ENST00000569080 SLFN5Q08AF3 891 aa9.98□□□□□ -0.81
CDH3-209ENST00000569080 USP50Q70EL3 339 aaPredicted RBP9.98□□□□□ -0.81
CDH3-209ENST00000569080 CDC5LQ99459 802 aaKnown RBP9.98□□□□□ -0.81
CDH3-209ENST00000569080 EYA3Q99504 573 aa9.98□□□□□ -0.81
CDH3-209ENST00000569080 ADARB2Q9NS39 739 aaKnown RBP9.98□□□□□ -0.81
CDH3-209ENST00000569080 BSDC1Q9NW68 430 aaPredicted RBP9.98□□□□□ -0.81
CDH3-209ENST00000569080 XDHP47989 1333 aa9.98□□□□□ -0.81
CDH3-209ENST00000569080 CNTNAP1P78357 1384 aa9.98□□□□□ -0.81
CDH3-209ENST00000569080 MED23Q9ULK4 1368 aa9.98□□□□□ -0.81
CDH3-209ENST00000569080 RIMBP2O15034 1052 aa9.97□□□□□ -0.81
CDH3-209ENST00000569080 HIRAP54198 1017 aaPredicted RBP9.97□□□□□ -0.81
CDH3-209ENST00000569080 FOXO4P98177 505 aa9.97□□□□□ -0.81
CDH3-209ENST00000569080 TNIP1Q15025 636 aa9.97□□□□□ -0.81
CDH3-209ENST00000569080 EPHA10Q5JZY3 1008 aa9.97□□□□□ -0.81
CDH3-209ENST00000569080 TRMT2AQ8IZ69 625 aaKnown RBP9.97□□□□□ -0.81
CDH3-209ENST00000569080 CNTROBQ8N137 903 aa9.97□□□□□ -0.81
CDH3-209ENST00000569080 TRPM4Q8TD43 1214 aa9.97□□□□□ -0.81
CDH3-209ENST00000569080 CDCA7LQ96GN5 454 aa9.97□□□□□ -0.81
CDH3-209ENST00000569080 KCNQ5Q9NR82 932 aa9.97□□□□□ -0.81
CDH3-209ENST00000569080 GGA1Q9UJY5 639 aa9.97□□□□□ -0.81
CDH3-209ENST00000569080 MINPP1Q9UNW1 487 aa9.97□□□□□ -0.81
CDH3-209ENST00000569080 ZBTB12Q9Y330 459 aaPredicted RBP9.97□□□□□ -0.81
CDH3-209ENST00000569080 GRM8O00222 908 aa9.96□□□□□ -0.82
CDH3-209ENST00000569080 EGFRP00533 1210 aa9.96□□□□□ -0.82
CDH3-209ENST00000569080 ITGA6P23229 1130 aa9.96□□□□□ -0.82
CDH3-209ENST00000569080 FMR1Q06787 632 aaKnown RBP eCLIP9.96□□□□□ -0.82
CDH3-209ENST00000569080 DOK7Q18PE1 504 aa9.96□□□□□ -0.82
CDH3-209ENST00000569080 MICALL2Q8IY33 904 aa9.96□□□□□ -0.82
CDH3-209ENST00000569080 MRPL50Q8N5N7 158 aaKnown RBP9.96□□□□□ -0.82
CDH3-209ENST00000569080 DPF2Q92785 391 aa9.96□□□□□ -0.82
CDH3-209ENST00000569080 ANKIB1Q9P2G1 1089 aa9.96□□□□□ -0.82
CDH3-209ENST00000569080 PGAP2Q9UHJ9 254 aa9.96□□□□□ -0.82
CDH3-209ENST00000569080 IRS2Q9Y4H2 1338 aa9.96□□□□□ -0.82
CDH3-209ENST00000569080 TMEM88BA6NKF7 163 aa9.95□□□□□ -0.82
CDH3-209ENST00000569080 TRAF5O00463 557 aa9.95□□□□□ -0.82
CDH3-209ENST00000569080 ALDH1L1O75891 902 aa9.95□□□□□ -0.82
CDH3-209ENST00000569080 ATP2B4P23634 1241 aa9.95□□□□□ -0.82
CDH3-209ENST00000569080 KLRK1P26718 216 aa9.95□□□□□ -0.82
CDH3-209ENST00000569080 SSH1Q8WYL5 1049 aa9.95□□□□□ -0.82
CDH3-209ENST00000569080 KAZALD1Q96I82 304 aa9.95□□□□□ -0.82
CDH3-209ENST00000569080 CNOT7Q9UIV1 285 aaKnown RBP9.95□□□□□ -0.82
CDH3-209ENST00000569080 CLEC11AQ9Y240 323 aa9.95□□□□□ -0.82
CDH3-209ENST00000569080 UTYO14607 1347 aa9.95□□□□□ -0.82
CDH3-209ENST00000569080 PTPRCP08575 1304 aa9.94□□□□□ -0.82
CDH3-209ENST00000569080 RASSF10A6NK89 507 aa9.94□□□□□ -0.82
CDH3-209ENST00000569080 VIL1P09327 827 aaKnown RBP9.94□□□□□ -0.82
CDH3-209ENST00000569080 RPS12P25398 132 aaKnown RBP9.94□□□□□ -0.82
CDH3-209ENST00000569080 CCT4P50991 539 aaKnown RBP9.94□□□□□ -0.82
CDH3-209ENST00000569080 TXNRD3Q86VQ6 643 aa9.94□□□□□ -0.82
CDH3-209ENST00000569080 GMLQ99445 158 aa9.94□□□□□ -0.82
CDH3-209ENST00000569080 BCL2L13Q9BXK5 485 aa9.94□□□□□ -0.82
CDH3-209ENST00000569080 ZC3H12CQ9C0D7 883 aaKnown RBP9.94□□□□□ -0.82
CDH3-209ENST00000569080 MKRN1Q9UHC7 482 aaKnown RBP9.94□□□□□ -0.82
CDH3-209ENST00000569080 IGHMBP2P38935 993 aaKnown RBP9.93□□□□□ -0.82
CDH3-209ENST00000569080 CST9Q5W186 159 aa9.93□□□□□ -0.82
CDH3-209ENST00000569080 SAMD7Q7Z3H4 446 aa9.93□□□□□ -0.82
CDH3-209ENST00000569080 ZC3H15Q8WU90 426 aaKnown RBP9.93□□□□□ -0.82
CDH3-209ENST00000569080 SUCLG2Q96I99 432 aa9.93□□□□□ -0.82
CDH3-209ENST00000569080 GLIS2Q9BZE0 524 aaPredicted RBP9.93□□□□□ -0.82
CDH3-209ENST00000569080 SRCIN1Q9C0H9 1055 aa9.93□□□□□ -0.82
CDH3-209ENST00000569080 ARAP2Q8WZ64 1704 aa9.93□□□□□ -0.82
CDH3-209ENST00000569080 ZNF804BA4D1E1 1349 aa9.92□□□□□ -0.82
CDH3-209ENST00000569080 ANKRD18BA2A2Z9 1011 aa9.92□□□□□ -0.82
CDH3-209ENST00000569080 NBPF7P0C2Y1 421 aaPredicted RBP9.92□□□□□ -0.82
CDH3-209ENST00000569080 ZNF280AP59817 542 aaPredicted RBP9.92□□□□□ -0.82
CDH3-209ENST00000569080 CHRNDQ07001 517 aa9.92□□□□□ -0.82
CDH3-209ENST00000569080 ALDH1L2Q3SY69 923 aa9.92□□□□□ -0.82
CDH3-209ENST00000569080 RSBN1LQ6PCB5 846 aaPredicted RBP9.92□□□□□ -0.82
CDH3-209ENST00000569080 SLC4A10Q6U841 1118 aa9.92□□□□□ -0.82
CDH3-209ENST00000569080 LMBR1LQ6UX01 489 aa9.92□□□□□ -0.82
CDH3-209ENST00000569080 PODNQ7Z5L7 613 aa9.92□□□□□ -0.82
CDH3-209ENST00000569080 LEMD3Q9Y2U8 911 aa9.92□□□□□ -0.82
CDH3-209ENST00000569080 POLR2AP24928 1970 aaKnown RBP9.92□□□□□ -0.82
CDH3-209ENST00000569080 ASTN2O75129 1339 aaPredicted RBP9.91□□□□□ -0.82
CDH3-209ENST00000569080 H7C1D1 291 aa9.91□□□□□ -0.82
CDH3-209ENST00000569080 SNAP23O00161 211 aa9.91□□□□□ -0.82
CDH3-209ENST00000569080 HSPA1AP0DMV8 641 aaKnown RBP9.91□□□□□ -0.82
CDH3-209ENST00000569080 HSPA1BP0DMV9 641 aaKnown RBP9.91□□□□□ -0.82
CDH3-209ENST00000569080 VEGFBP49765 207 aa9.91□□□□□ -0.82
CDH3-209ENST00000569080 IFIT5Q13325 482 aaKnown RBP9.91□□□□□ -0.82
CDH3-209ENST00000569080 KIF4BQ2VIQ3 1234 aa9.91□□□□□ -0.82
CDH3-209ENST00000569080 RABL6Q3YEC7 729 aaPredicted RBP9.91□□□□□ -0.82
CDH3-209ENST00000569080 TBC1D10BQ4KMP7 808 aaPredicted RBP9.91□□□□□ -0.82
CDH3-209ENST00000569080 DACT2Q5SW24 774 aa9.91□□□□□ -0.82
CDH3-209ENST00000569080 C15orf52Q6ZUT6 534 aaKnown RBP9.91□□□□□ -0.82
CDH3-209ENST00000569080 ANKRD44Q8N8A2 993 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms