RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 PLBD2Q8NHP8 589 aa19.42■□□□□ 0.7
USB1-214ENST00000568848 PDE4DIPQ5VU43 2346 aa19.42■□□□□ 0.7
USB1-214ENST00000568848 IRS4O14654 1257 aaPredicted RBP19.41■□□□□ 0.7
USB1-214ENST00000568848 TRPA1O75762 1119 aa19.41■□□□□ 0.7
USB1-214ENST00000568848 ZNF157P51786 506 aaPredicted RBP19.41■□□□□ 0.7
USB1-214ENST00000568848 SF3B3Q15393 1217 aaKnown RBP19.41■□□□□ 0.7
USB1-214ENST00000568848 KIF4BQ2VIQ3 1234 aa19.41■□□□□ 0.7
USB1-214ENST00000568848 ANKRD13DQ6ZTN6 518 aa19.41■□□□□ 0.7
USB1-214ENST00000568848 PNNQ9H307 717 aaKnown RBP19.41■□□□□ 0.7
USB1-214ENST00000568848 CA12O43570 354 aa19.4■□□□□ 0.7
USB1-214ENST00000568848 DPF2Q92785 391 aa19.4■□□□□ 0.7
USB1-214ENST00000568848 RNF186Q9NXI6 227 aa19.4■□□□□ 0.7
USB1-214ENST00000568848 DCPSQ96C86 337 aaKnown RBP19.39■□□□□ 0.69
USB1-214ENST00000568848 CDCA5Q96FF9 252 aa19.39■□□□□ 0.69
USB1-214ENST00000568848 PHAXQ9H814 394 aaKnown RBP19.39■□□□□ 0.69
USB1-214ENST00000568848 ELL2O00472 640 aaPredicted RBP19.38■□□□□ 0.69
USB1-214ENST00000568848 UFL1O94874 794 aa19.38■□□□□ 0.69
USB1-214ENST00000568848 PRAMEF18Q5VWM3 479 aa19.38■□□□□ 0.69
USB1-214ENST00000568848 DUSP27Q5VZP5 1158 aa19.38■□□□□ 0.69
USB1-214ENST00000568848 MXD3Q9BW11 206 aa19.38■□□□□ 0.69
USB1-214ENST00000568848 BABAM1Q9NWV8 329 aa19.38■□□□□ 0.69
USB1-214ENST00000568848 RPS8P62241 208 aaKnown RBP19.37■□□□□ 0.69
USB1-214ENST00000568848 LMOD3Q0VAK6 560 aa19.37■□□□□ 0.69
USB1-214ENST00000568848 ANGEL2Q5VTE6 544 aaKnown RBP19.37■□□□□ 0.69
USB1-214ENST00000568848 C2orf69Q8N8R5 385 aa19.37■□□□□ 0.69
USB1-214ENST00000568848 MYD88Q99836 296 aa19.37■□□□□ 0.69
USB1-214ENST00000568848 SLC10A3P09131 477 aa19.36■□□□□ 0.69
USB1-214ENST00000568848 TMC4Q7Z404 712 aa19.36■□□□□ 0.69
USB1-214ENST00000568848 CSRNP1Q96S65 589 aa19.36■□□□□ 0.69
USB1-214ENST00000568848 AKAP11Q9UKA4 1901 aa19.35■□□□□ 0.69
USB1-214ENST00000568848 SPEF2Q9C093 1822 aa19.35■□□□□ 0.69
USB1-214ENST00000568848 SCARF1Q14162 830 aa19.35■□□□□ 0.69
USB1-214ENST00000568848 RASAL3Q86YV0 1011 aa19.35■□□□□ 0.69
USB1-214ENST00000568848 MBIPQ9NS73 344 aa19.35■□□□□ 0.69
USB1-214ENST00000568848 VIL1P09327 827 aaKnown RBP19.34■□□□□ 0.69
USB1-214ENST00000568848 RIC3Q7Z5B4 369 aa19.34■□□□□ 0.69
USB1-214ENST00000568848 SULF1Q8IWU6 871 aa19.34■□□□□ 0.69
USB1-214ENST00000568848 EYA3Q99504 573 aa19.34■□□□□ 0.69
USB1-214ENST00000568848 ZC3H12CQ9C0D7 883 aaKnown RBP19.34■□□□□ 0.69
USB1-214ENST00000568848 ANKIB1Q9P2G1 1089 aa19.34■□□□□ 0.69
USB1-214ENST00000568848 DBF4Q9UBU7 674 aaPredicted RBP19.34■□□□□ 0.69
USB1-214ENST00000568848 RPS12P25398 132 aaKnown RBP19.33■□□□□ 0.68
USB1-214ENST00000568848 MKRN3Q13064 507 aaKnown RBP19.33■□□□□ 0.68
USB1-214ENST00000568848 ADAMTS8Q9UP79 889 aa19.33■□□□□ 0.68
USB1-214ENST00000568848 G3V3G9 751 aa19.32■□□□□ 0.68
USB1-214ENST00000568848 DDX10Q13206 875 aaKnown RBP19.32■□□□□ 0.68
USB1-214ENST00000568848 DCAF8Q5TAQ9 597 aa19.32■□□□□ 0.68
USB1-214ENST00000568848 RSBN1LQ6PCB5 846 aaPredicted RBP19.32■□□□□ 0.68
USB1-214ENST00000568848 RUNDC1Q96C34 613 aa19.32■□□□□ 0.68
USB1-214ENST00000568848 GGA1Q9UJY5 639 aa19.32■□□□□ 0.68
USB1-214ENST00000568848 PSME4Q14997 1843 aa19.31■□□□□ 0.68
USB1-214ENST00000568848 UBE2Q2LH0YL09 131 aa19.31■□□□□ 0.68
USB1-214ENST00000568848 ZBTB38Q8NAP3 1195 aaPredicted RBP19.31■□□□□ 0.68
USB1-214ENST00000568848 CCDC102AQ96A19 550 aa19.31■□□□□ 0.68
USB1-214ENST00000568848 HYPKQ9NX55 129 aa19.31■□□□□ 0.68
USB1-214ENST00000568848 ZNF280AP59817 542 aaPredicted RBP19.3■□□□□ 0.68
USB1-214ENST00000568848 RALBP1Q15311 655 aa19.3■□□□□ 0.68
USB1-214ENST00000568848 PODXL2Q9NZ53 605 aa19.3■□□□□ 0.68
USB1-214ENST00000568848 ZNF646O15015 1829 aaPredicted RBP19.3■□□□□ 0.68
USB1-214ENST00000568848 TBC1D8O95759 1140 aa19.29■□□□□ 0.68
USB1-214ENST00000568848 GOLGA2Q08379 1002 aa19.29■□□□□ 0.68
USB1-214ENST00000568848 NBPF9Q3BBW0 867 aa19.29■□□□□ 0.68
USB1-214ENST00000568848 C8orf58Q8NAV2 365 aa19.29■□□□□ 0.68
USB1-214ENST00000568848 FBXW7Q969H0 707 aa19.29■□□□□ 0.68
USB1-214ENST00000568848 GMLQ99445 158 aa19.29■□□□□ 0.68
USB1-214ENST00000568848 MYOZ2Q9NPC6 264 aa19.29■□□□□ 0.68
USB1-214ENST00000568848 SAGE1Q9NXZ1 904 aa19.29■□□□□ 0.68
USB1-214ENST00000568848 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.29■□□□□ 0.68
USB1-214ENST00000568848 FZD1Q9UP38 647 aa19.29■□□□□ 0.68
USB1-214ENST00000568848 MYBBP1AQ9BQG0 1328 aaKnown RBP19.28■□□□□ 0.68
USB1-214ENST00000568848 TRIM28Q13263 835 aaKnown RBP19.28■□□□□ 0.68
USB1-214ENST00000568848 WDR43Q15061 677 aaKnown RBP eCLIP19.28■□□□□ 0.68
USB1-214ENST00000568848 PAPPA2Q9BXP8 1791 aa19.27■□□□□ 0.68
USB1-214ENST00000568848 SASH1O94885 1247 aa19.27■□□□□ 0.68
USB1-214ENST00000568848 HOXB7P09629 217 aa19.27■□□□□ 0.68
USB1-214ENST00000568848 KLRK1P26718 216 aa19.27■□□□□ 0.68
USB1-214ENST00000568848 PRKG1Q13976 671 aa19.27■□□□□ 0.68
USB1-214ENST00000568848 USP17L8P0C7I0 530 aa19.26■□□□□ 0.67
USB1-214ENST00000568848 CCDC152Q4G0S7 254 aa19.26■□□□□ 0.67
USB1-214ENST00000568848 CTU1Q7Z7A3 348 aaKnown RBP19.26■□□□□ 0.67
USB1-214ENST00000568848 TXNRD3Q86VQ6 643 aa19.26■□□□□ 0.67
USB1-214ENST00000568848 R3HDMLQ9H3Y0 253 aa19.26■□□□□ 0.67
USB1-214ENST00000568848 APAF1O14727 1248 aa19.25■□□□□ 0.67
USB1-214ENST00000568848 PDE8AO60658 829 aa19.25■□□□□ 0.67
USB1-214ENST00000568848 PCCAP05165 728 aaPredicted RBP19.25■□□□□ 0.67
USB1-214ENST00000568848 ZNF853P0CG23 659 aa19.25■□□□□ 0.67
USB1-214ENST00000568848 TSPYL6Q8N831 410 aa19.25■□□□□ 0.67
USB1-214ENST00000568848 CWC25Q9NXE8 425 aaPredicted RBP19.25■□□□□ 0.67
USB1-214ENST00000568848 HPS5Q9UPZ3 1129 aa19.25■□□□□ 0.67
USB1-214ENST00000568848 TTLL12Q14166 644 aaPredicted RBP19.24■□□□□ 0.67
USB1-214ENST00000568848 ANKRD18AQ8IVF6 992 aa19.24■□□□□ 0.67
USB1-214ENST00000568848 AGBL3Q8NEM8 1001 aa19.24■□□□□ 0.67
USB1-214ENST00000568848 ZNF296Q8WUU4 475 aaPredicted RBP19.24■□□□□ 0.67
USB1-214ENST00000568848 GREM2Q9H772 168 aa19.24■□□□□ 0.67
USB1-214ENST00000568848 MAP3K2Q9Y2U5 619 aa19.24■□□□□ 0.67
USB1-214ENST00000568848 XDHP47989 1333 aa19.24■□□□□ 0.67
USB1-214ENST00000568848 USP17L3A6NCW0 530 aa19.23■□□□□ 0.67
USB1-214ENST00000568848 USP17L4A6NCW7 530 aa19.23■□□□□ 0.67
USB1-214ENST00000568848 IGKV5-2P06315 115 aa19.23■□□□□ 0.67
USB1-214ENST00000568848 USP17L1Q7RTZ2 530 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms