RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 GRIPAP1Q4V328 841 aa12.65□□□□□ -0.38
HERPUD1-216ENST00000568814 DALRD3Q5D0E6 543 aaKnown RBP12.65□□□□□ -0.38
HERPUD1-216ENST00000568814 SOGA3Q5TF21 947 aa12.65□□□□□ -0.38
HERPUD1-216ENST00000568814 SP8Q8IXZ3 490 aa12.65□□□□□ -0.38
HERPUD1-216ENST00000568814 NLGN2Q8NFZ4 835 aa12.65□□□□□ -0.38
HERPUD1-216ENST00000568814 KLHDC4Q8TBB5 520 aa12.65□□□□□ -0.38
HERPUD1-216ENST00000568814 GCC1Q96CN9 775 aa12.65□□□□□ -0.38
HERPUD1-216ENST00000568814 ZNF594Q96JF6 807 aaPredicted RBP12.65□□□□□ -0.38
HERPUD1-216ENST00000568814 PA2G4Q9UQ80 394 aaKnown RBP12.65□□□□□ -0.38
HERPUD1-216ENST00000568814 ATP6V0A2Q9Y487 856 aa12.65□□□□□ -0.38
HERPUD1-216ENST00000568814 TAF1P21675 1872 aa12.65□□□□□ -0.38
HERPUD1-216ENST00000568814 CACNA1SQ13698 1873 aa12.65□□□□□ -0.38
HERPUD1-216ENST00000568814 RAB11FIP3O75154 756 aa12.64□□□□□ -0.39
HERPUD1-216ENST00000568814 CCDC136Q96JN2 1154 aa12.64□□□□□ -0.39
HERPUD1-216ENST00000568814 ANKRD2Q9GZV1 360 aa12.64□□□□□ -0.39
HERPUD1-216ENST00000568814 SIL1Q9H173 461 aa12.64□□□□□ -0.39
HERPUD1-216ENST00000568814 DCTPP1Q9H773 170 aa12.64□□□□□ -0.39
HERPUD1-216ENST00000568814 RIPOR2Q9Y4F9 1068 aa12.64□□□□□ -0.39
HERPUD1-216ENST00000568814 SLX4Q8IY92 1834 aa12.64□□□□□ -0.39
HERPUD1-216ENST00000568814 COL4A1P02462 1669 aa12.64□□□□□ -0.39
HERPUD1-216ENST00000568814 ATG9AQ7Z3C6 839 aa12.63□□□□□ -0.39
HERPUD1-216ENST00000568814 PUS3Q9BZE2 481 aaKnown RBP12.63□□□□□ -0.39
HERPUD1-216ENST00000568814 CEP126Q9P2H0 1117 aa12.63□□□□□ -0.39
HERPUD1-216ENST00000568814 MINPP1Q9UNW1 487 aa12.63□□□□□ -0.39
HERPUD1-216ENST00000568814 EXOC6BQ9Y2D4 811 aa12.63□□□□□ -0.39
HERPUD1-216ENST00000568814 XDHP47989 1333 aa12.62□□□□□ -0.39
HERPUD1-216ENST00000568814 ARFGEF1Q9Y6D6 1849 aa12.62□□□□□ -0.39
HERPUD1-216ENST00000568814 CAPN15O75808 1086 aa12.62□□□□□ -0.39
HERPUD1-216ENST00000568814 CHRNDQ07001 517 aa12.62□□□□□ -0.39
HERPUD1-216ENST00000568814 LRRC24Q50LG9 513 aa12.62□□□□□ -0.39
HERPUD1-216ENST00000568814 CCDC93Q567U6 631 aa12.62□□□□□ -0.39
HERPUD1-216ENST00000568814 METTL24Q5JXM2 366 aa12.62□□□□□ -0.39
HERPUD1-216ENST00000568814 SMC5Q8IY18 1101 aa12.62□□□□□ -0.39
HERPUD1-216ENST00000568814 C7orf43Q8WVR3 580 aa12.62□□□□□ -0.39
HERPUD1-216ENST00000568814 KIF1BPQ96EK5 621 aa12.62□□□□□ -0.39
HERPUD1-216ENST00000568814 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
HERPUD1-216ENST00000568814 IGHDP01880 384 aa12.61□□□□□ -0.39
HERPUD1-216ENST00000568814 CENPQQ7L2Z9 268 aaPredicted RBP12.61□□□□□ -0.39
HERPUD1-216ENST00000568814 RTKN2Q8IZC4 609 aa12.61□□□□□ -0.39
HERPUD1-216ENST00000568814 RHPN1Q8TCX5 695 aa12.61□□□□□ -0.39
HERPUD1-216ENST00000568814 LRRCC1Q9C099 1032 aa12.61□□□□□ -0.39
HERPUD1-216ENST00000568814 GPR108Q9NPR9 543 aa12.61□□□□□ -0.39
HERPUD1-216ENST00000568814 PODXL2Q9NZ53 605 aa12.61□□□□□ -0.39
HERPUD1-216ENST00000568814 ANKIB1Q9P2G1 1089 aa12.61□□□□□ -0.39
HERPUD1-216ENST00000568814 BCS1LQ9Y276 419 aa12.61□□□□□ -0.39
HERPUD1-216ENST00000568814 AKAP2Q9Y2D5 859 aa12.61□□□□□ -0.39
HERPUD1-216ENST00000568814 A0A1B0GUL6 1792 aa12.61□□□□□ -0.39
HERPUD1-216ENST00000568814 PDE8BO95263 885 aa12.6□□□□□ -0.39
HERPUD1-216ENST00000568814 PUM3Q15397 648 aaKnown RBP12.6□□□□□ -0.39
HERPUD1-216ENST00000568814 GPR162Q16538 588 aa12.6□□□□□ -0.39
HERPUD1-216ENST00000568814 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
HERPUD1-216ENST00000568814 VGLL2Q8N8G2 317 aa12.6□□□□□ -0.39
HERPUD1-216ENST00000568814 LEMD3Q9Y2U8 911 aa12.6□□□□□ -0.39
HERPUD1-216ENST00000568814 LTBP1Q14766 1721 aa12.59□□□□□ -0.39
HERPUD1-216ENST00000568814 C21orf2O43822 256 aa12.59□□□□□ -0.39
HERPUD1-216ENST00000568814 SASH1O94885 1247 aa12.59□□□□□ -0.39
HERPUD1-216ENST00000568814 ATP2B4P23634 1241 aa12.59□□□□□ -0.39
HERPUD1-216ENST00000568814 KCNJ4P48050 445 aa12.59□□□□□ -0.39
HERPUD1-216ENST00000568814 TFCP2Q12800 502 aa12.59□□□□□ -0.39
HERPUD1-216ENST00000568814 UBE4AQ14139 1066 aa12.59□□□□□ -0.39
HERPUD1-216ENST00000568814 DPP8Q6V1X1 898 aaPredicted RBP12.59□□□□□ -0.39
HERPUD1-216ENST00000568814 MPNDQ8N594 471 aa12.59□□□□□ -0.39
HERPUD1-216ENST00000568814 SUPT20HQ8NEM7 779 aa12.59□□□□□ -0.39
HERPUD1-216ENST00000568814 GGA1Q9UJY5 639 aa12.59□□□□□ -0.39
HERPUD1-216ENST00000568814 NSFL1CQ9UNZ2 370 aaKnown RBP12.59□□□□□ -0.39
HERPUD1-216ENST00000568814 SNED1Q8TER0 1413 aa12.59□□□□□ -0.39
HERPUD1-216ENST00000568814 KDM2BQ8NHM5 1336 aa12.59□□□□□ -0.39
HERPUD1-216ENST00000568814 APBB1O00213 710 aa12.58□□□□□ -0.4
HERPUD1-216ENST00000568814 ZNF609O15014 1411 aa12.58□□□□□ -0.4
HERPUD1-216ENST00000568814 UFL1O94874 794 aa12.58□□□□□ -0.4
HERPUD1-216ENST00000568814 SLC5A1P13866 664 aa12.58□□□□□ -0.4
HERPUD1-216ENST00000568814 GPSM2P81274 684 aa12.58□□□□□ -0.4
HERPUD1-216ENST00000568814 ATP2B3Q16720 1220 aa12.58□□□□□ -0.4
HERPUD1-216ENST00000568814 CLASRPQ8N2M8 674 aaKnown RBP12.58□□□□□ -0.4
HERPUD1-216ENST00000568814 HELBQ8NG08 1087 aaPredicted RBP12.58□□□□□ -0.4
HERPUD1-216ENST00000568814 LPIN2Q92539 896 aa12.58□□□□□ -0.4
HERPUD1-216ENST00000568814 PSMD1Q99460 953 aa12.58□□□□□ -0.4
HERPUD1-216ENST00000568814 ZNF219Q9P2Y4 722 aaPredicted RBP12.58□□□□□ -0.4
HERPUD1-216ENST00000568814 DUOX1Q9NRD9 1551 aa12.57□□□□□ -0.4
HERPUD1-216ENST00000568814 TAF5LO75529 589 aa12.57□□□□□ -0.4
HERPUD1-216ENST00000568814 IFIT1P09914 478 aaKnown RBP12.57□□□□□ -0.4
HERPUD1-216ENST00000568814 B4GALNT3Q6L9W6 998 aa12.57□□□□□ -0.4
HERPUD1-216ENST00000568814 EYA3Q99504 573 aa12.57□□□□□ -0.4
HERPUD1-216ENST00000568814 RTFDC1Q9BY42 306 aaPredicted RBP12.57□□□□□ -0.4
HERPUD1-216ENST00000568814 WWC3Q9ULE0 1092 aa12.57□□□□□ -0.4
HERPUD1-216ENST00000568814 GTF3C3Q9Y5Q9 886 aa12.57□□□□□ -0.4
HERPUD1-216ENST00000568814 ZNF804BA4D1E1 1349 aa12.57□□□□□ -0.4
HERPUD1-216ENST00000568814 LTBP3Q9NS15 1303 aa12.57□□□□□ -0.4
HERPUD1-216ENST00000568814 FER1L6Q2WGJ9 1857 aa12.57□□□□□ -0.4
HERPUD1-216ENST00000568814 ARAP2Q8WZ64 1704 aa12.57□□□□□ -0.4
HERPUD1-216ENST00000568814 MED23Q9ULK4 1368 aa12.56□□□□□ -0.4
HERPUD1-216ENST00000568814 C6orf229H3BNL8 230 aa12.56□□□□□ -0.4
HERPUD1-216ENST00000568814 FGFR2P21802 821 aa12.56□□□□□ -0.4
HERPUD1-216ENST00000568814 FKBP4Q02790 459 aaKnown RBP eCLIP12.56□□□□□ -0.4
HERPUD1-216ENST00000568814 NUCB1Q02818 461 aa12.56□□□□□ -0.4
HERPUD1-216ENST00000568814 TNNI3KQ59H18 835 aa12.56□□□□□ -0.4
HERPUD1-216ENST00000568814 ANKRD45Q5TZF3 282 aa12.56□□□□□ -0.4
HERPUD1-216ENST00000568814 OLFM4Q6UX06 510 aa12.56□□□□□ -0.4
HERPUD1-216ENST00000568814 C15orf52Q6ZUT6 534 aaKnown RBP12.56□□□□□ -0.4
HERPUD1-216ENST00000568814 TBC1D16Q8TBP0 767 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms