RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 EXOSC9Q06265 439 aaKnown RBP16.45■□□□□ 0.22
TSC2-220ENST00000568238 FKBP5Q13451 457 aaPredicted RBP16.45■□□□□ 0.22
TSC2-220ENST00000568238 ANKRD18AQ8IVF6 992 aa16.45■□□□□ 0.22
TSC2-220ENST00000568238 PODXL2Q9NZ53 605 aa16.45■□□□□ 0.22
TSC2-220ENST00000568238 GGA1Q9UJY5 639 aa16.45■□□□□ 0.22
TSC2-220ENST00000568238 ZNF521Q96K83 1311 aa16.45■□□□□ 0.22
TSC2-220ENST00000568238 RTL9Q8NET4 1388 aa16.44■□□□□ 0.22
TSC2-220ENST00000568238 ECE2O60344 883 aa16.44■□□□□ 0.22
TSC2-220ENST00000568238 VAMP4O75379 141 aa16.44■□□□□ 0.22
TSC2-220ENST00000568238 UBE3BQ7Z3V4 1068 aa16.44■□□□□ 0.22
TSC2-220ENST00000568238 GPR101Q96P66 508 aaPredicted RBP16.44■□□□□ 0.22
TSC2-220ENST00000568238 CDC5LQ99459 802 aaKnown RBP16.44■□□□□ 0.22
TSC2-220ENST00000568238 MYH16Q9H6N6 1097 aa16.44■□□□□ 0.22
TSC2-220ENST00000568238 PSMD14O00487 310 aa16.43■□□□□ 0.22
TSC2-220ENST00000568238 DNAAF4Q8WXU2 420 aa16.43■□□□□ 0.22
TSC2-220ENST00000568238 ZC3H12CQ9C0D7 883 aaKnown RBP16.43■□□□□ 0.22
TSC2-220ENST00000568238 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
TSC2-220ENST00000568238 XDHP47989 1333 aa16.43■□□□□ 0.22
TSC2-220ENST00000568238 GCKRQ14397 625 aa16.42■□□□□ 0.22
TSC2-220ENST00000568238 DOK7Q18PE1 504 aa16.42■□□□□ 0.22
TSC2-220ENST00000568238 MICALL2Q8IY33 904 aa16.42■□□□□ 0.22
TSC2-220ENST00000568238 TTLL11Q8NHH1 800 aa16.42■□□□□ 0.22
TSC2-220ENST00000568238 TRPM4Q8TD43 1214 aa16.42■□□□□ 0.22
TSC2-220ENST00000568238 GREM2Q9H772 168 aa16.42■□□□□ 0.22
TSC2-220ENST00000568238 CNOT7Q9UIV1 285 aaKnown RBP16.42■□□□□ 0.22
TSC2-220ENST00000568238 ABT1Q9ULW3 272 aaKnown RBP16.42■□□□□ 0.22
TSC2-220ENST00000568238 ZBTB12Q9Y330 459 aaPredicted RBP16.42■□□□□ 0.22
TSC2-220ENST00000568238 THSD7BQ9C0I4 1608 aa16.41■□□□□ 0.22
TSC2-220ENST00000568238 RASSF10A6NK89 507 aa16.41■□□□□ 0.22
TSC2-220ENST00000568238 G3V3G9 751 aa16.41■□□□□ 0.22
TSC2-220ENST00000568238 H7C1D1 291 aa16.41■□□□□ 0.22
TSC2-220ENST00000568238 H7C1W4 665 aa16.41■□□□□ 0.22
TSC2-220ENST00000568238 TRAF5O00463 557 aa16.41■□□□□ 0.22
TSC2-220ENST00000568238 RPS12P25398 132 aaKnown RBP16.41■□□□□ 0.22
TSC2-220ENST00000568238 VEGFBP49765 207 aa16.41■□□□□ 0.22
TSC2-220ENST00000568238 DCAF8Q5TAQ9 597 aa16.41■□□□□ 0.22
TSC2-220ENST00000568238 LINS1Q8NG48 757 aa16.41■□□□□ 0.22
TSC2-220ENST00000568238 DPF2Q92785 391 aa16.41■□□□□ 0.22
TSC2-220ENST00000568238 SHTN1A0MZ66 631 aa16.4■□□□□ 0.22
TSC2-220ENST00000568238 ZC3H15Q8WU90 426 aaKnown RBP16.4■□□□□ 0.22
TSC2-220ENST00000568238 A0A1B0GUL6 1792 aa16.4■□□□□ 0.22
TSC2-220ENST00000568238 ATP2B4P23634 1241 aa16.39■□□□□ 0.21
TSC2-220ENST00000568238 HIRAP54198 1017 aaPredicted RBP16.39■□□□□ 0.21
TSC2-220ENST00000568238 FMR1Q06787 632 aaKnown RBP eCLIP16.39■□□□□ 0.21
TSC2-220ENST00000568238 DEFB115Q30KQ5 88 aa16.39■□□□□ 0.21
TSC2-220ENST00000568238 COL13A1Q5TAT6 717 aaPredicted RBP16.39■□□□□ 0.21
TSC2-220ENST00000568238 PLA2G12BQ9BX93 195 aa16.39■□□□□ 0.21
TSC2-220ENST00000568238 KCNQ5Q9NR82 932 aa16.39■□□□□ 0.21
TSC2-220ENST00000568238 BSDC1Q9NW68 430 aaPredicted RBP16.39■□□□□ 0.21
TSC2-220ENST00000568238 PGAP2Q9UHJ9 254 aa16.39■□□□□ 0.21
TSC2-220ENST00000568238 POLR2AP24928 1970 aaKnown RBP16.38■□□□□ 0.21
TSC2-220ENST00000568238 ZNF646O15015 1829 aaPredicted RBP16.38■□□□□ 0.21
TSC2-220ENST00000568238 ZNF609O15014 1411 aa16.38■□□□□ 0.21
TSC2-220ENST00000568238 IGHMBP2P38935 993 aaKnown RBP16.38■□□□□ 0.21
TSC2-220ENST00000568238 CASP7P55210 303 aa16.38■□□□□ 0.21
TSC2-220ENST00000568238 FAM161AQ3B820 660 aa16.38■□□□□ 0.21
TSC2-220ENST00000568238 CDCA7LQ96GN5 454 aa16.38■□□□□ 0.21
TSC2-220ENST00000568238 GLIS2Q9BZE0 524 aaPredicted RBP16.38■□□□□ 0.21
TSC2-220ENST00000568238 MED23Q9ULK4 1368 aa16.38■□□□□ 0.21
TSC2-220ENST00000568238 E9PSI1 815 aa16.37■□□□□ 0.21
TSC2-220ENST00000568238 F6X3S4 739 aa16.37■□□□□ 0.21
TSC2-220ENST00000568238 CST9Q5W186 159 aa16.37■□□□□ 0.21
TSC2-220ENST00000568238 SAMD7Q7Z3H4 446 aa16.37■□□□□ 0.21
TSC2-220ENST00000568238 YTHDC1Q96MU7 727 aaKnown RBP16.37■□□□□ 0.21
TSC2-220ENST00000568238 MINPP1Q9UNW1 487 aa16.37■□□□□ 0.21
TSC2-220ENST00000568238 CELF2O95319 508 aaKnown RBP16.36■□□□□ 0.21
TSC2-220ENST00000568238 VIL1P09327 827 aaKnown RBP16.36■□□□□ 0.21
TSC2-220ENST00000568238 ITGA6P23229 1130 aa16.36■□□□□ 0.21
TSC2-220ENST00000568238 TBC1D10BQ4KMP7 808 aaPredicted RBP16.36■□□□□ 0.21
TSC2-220ENST00000568238 PAXIP1Q6ZW49 1069 aaPredicted RBP16.36■□□□□ 0.21
TSC2-220ENST00000568238 AIDAQ96BJ3 306 aa16.36■□□□□ 0.21
TSC2-220ENST00000568238 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
TSC2-220ENST00000568238 WDR33Q9C0J8 1336 aaKnown RBP16.36■□□□□ 0.21
TSC2-220ENST00000568238 EGFRP00533 1210 aa16.35■□□□□ 0.21
TSC2-220ENST00000568238 CCT4P50991 539 aaKnown RBP16.35■□□□□ 0.21
TSC2-220ENST00000568238 SLFN5Q08AF3 891 aa16.35■□□□□ 0.21
TSC2-220ENST00000568238 BEND3Q5T5X7 828 aa16.35■□□□□ 0.21
TSC2-220ENST00000568238 CDC37L1Q7L3B6 337 aa16.35■□□□□ 0.21
TSC2-220ENST00000568238 MPHOSPH8Q99549 860 aa16.35■□□□□ 0.21
TSC2-220ENST00000568238 TLL2Q9Y6L7 1015 aa16.35■□□□□ 0.21
TSC2-220ENST00000568238 CSF1RP07333 972 aa16.34■□□□□ 0.21
TSC2-220ENST00000568238 ECE1P42892 770 aa16.34■□□□□ 0.21
TSC2-220ENST00000568238 KIF4BQ2VIQ3 1234 aa16.34■□□□□ 0.21
TSC2-220ENST00000568238 RSBN1LQ6PCB5 846 aaPredicted RBP16.34■□□□□ 0.21
TSC2-220ENST00000568238 PODNQ7Z5L7 613 aa16.34■□□□□ 0.21
TSC2-220ENST00000568238 ZNF408Q9H9D4 720 aa16.34■□□□□ 0.21
TSC2-220ENST00000568238 FOXN1O15353 648 aa16.33■□□□□ 0.2
TSC2-220ENST00000568238 RBM26Q5T8P6 1007 aaKnown RBP16.33■□□□□ 0.2
TSC2-220ENST00000568238 TNS4Q8IZW8 715 aa16.33■□□□□ 0.2
TSC2-220ENST00000568238 AGBL3Q8NEM8 1001 aa16.33■□□□□ 0.2
TSC2-220ENST00000568238 CAPNS2Q96L46 248 aa16.33■□□□□ 0.2
TSC2-220ENST00000568238 ANKRD2Q9GZV1 360 aa16.33■□□□□ 0.2
TSC2-220ENST00000568238 ANKRD18BA2A2Z9 1011 aa16.32■□□□□ 0.2
TSC2-220ENST00000568238 USP17L3A6NCW0 530 aa16.32■□□□□ 0.2
TSC2-220ENST00000568238 USP17L4A6NCW7 530 aa16.32■□□□□ 0.2
TSC2-220ENST00000568238 WTIPA6NIX2 430 aaPredicted RBP16.32■□□□□ 0.2
TSC2-220ENST00000568238 GRM8O00222 908 aa16.32■□□□□ 0.2
TSC2-220ENST00000568238 GRM1Q13255 1194 aa16.32■□□□□ 0.2
TSC2-220ENST00000568238 CYP4F22Q6NT55 531 aa16.32■□□□□ 0.2
TSC2-220ENST00000568238 USP17L1Q7RTZ2 530 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms