RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 SMC1BQ8NDV3 1235 aa10.38□□□□□ -0.75
HDGFL3-205ENST00000568129 EYA3Q99504 573 aa10.38□□□□□ -0.75
HDGFL3-205ENST00000568129 ZNF609O15014 1411 aa10.38□□□□□ -0.75
HDGFL3-205ENST00000568129 XDHP47989 1333 aa10.37□□□□□ -0.75
HDGFL3-205ENST00000568129 CEP350Q5VT06 3117 aa10.37□□□□□ -0.75
HDGFL3-205ENST00000568129 ATP2B4P23634 1241 aa10.37□□□□□ -0.75
HDGFL3-205ENST00000568129 TRPM7Q96QT4 1865 aa10.37□□□□□ -0.75
HDGFL3-205ENST00000568129 USP44Q9H0E7 712 aa10.37□□□□□ -0.75
HDGFL3-205ENST00000568129 HACL1Q9UJ83 578 aa10.37□□□□□ -0.75
HDGFL3-205ENST00000568129 ZBED9Q6R2W3 1325 aa10.36□□□□□ -0.75
HDGFL3-205ENST00000568129 IRS2Q9Y4H2 1338 aa10.36□□□□□ -0.75
HDGFL3-205ENST00000568129 NBPF7P0C2Y1 421 aaPredicted RBP10.36□□□□□ -0.75
HDGFL3-205ENST00000568129 FAM161AQ3B820 660 aa10.36□□□□□ -0.75
HDGFL3-205ENST00000568129 SLC4A10Q6U841 1118 aa10.36□□□□□ -0.75
HDGFL3-205ENST00000568129 C15orf52Q6ZUT6 534 aaKnown RBP10.36□□□□□ -0.75
HDGFL3-205ENST00000568129 PNMA8AQ86V59 439 aaPredicted RBP10.36□□□□□ -0.75
HDGFL3-205ENST00000568129 LDHDQ86WU2 507 aa10.36□□□□□ -0.75
HDGFL3-205ENST00000568129 DNAJC5GQ8N7S2 189 aa10.36□□□□□ -0.75
HDGFL3-205ENST00000568129 CCDC85AQ96PX6 553 aaPredicted RBP10.36□□□□□ -0.75
HDGFL3-205ENST00000568129 C9orf78Q9NZ63 289 aaPredicted RBP10.36□□□□□ -0.75
HDGFL3-205ENST00000568129 PGAP2Q9UHJ9 254 aa10.36□□□□□ -0.75
HDGFL3-205ENST00000568129 GGA1Q9UJY5 639 aa10.36□□□□□ -0.75
HDGFL3-205ENST00000568129 LEMD3Q9Y2U8 911 aa10.36□□□□□ -0.75
HDGFL3-205ENST00000568129 ANKRD18BA2A2Z9 1011 aa10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 C6orf229H3BNL8 230 aa10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 ITGBL1O95965 494 aaPredicted RBP10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 VIL1P09327 827 aaKnown RBP10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 EPHX2P34913 555 aa10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 IGHMBP2P38935 993 aaKnown RBP10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 CCT4P50991 539 aaKnown RBP10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 APLP1P51693 650 aa10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 IFIT5Q13325 482 aaKnown RBP10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 TNIP1Q15025 636 aa10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 CIAPIN1Q6FI81 312 aa10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 CHADLQ6NUI6 762 aa10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 LMBR1LQ6UX01 489 aa10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 USP50Q70EL3 339 aaPredicted RBP10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 DPF2Q92785 391 aa10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 SUCLG2Q96I99 432 aa10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 ZC3H12CQ9C0D7 883 aaKnown RBP10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 ANKRD2Q9GZV1 360 aa10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 SMC4Q9NTJ3 1288 aa10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 GPRC5DQ9NZD1 345 aa10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 ANKIB1Q9P2G1 1089 aa10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 NOB1Q9ULX3 412 aaKnown RBP10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 MED23Q9ULK4 1368 aa10.35□□□□□ -0.75
HDGFL3-205ENST00000568129 PASKQ96RG2 1323 aa10.34□□□□□ -0.75
HDGFL3-205ENST00000568129 WTIPA6NIX2 430 aaPredicted RBP10.34□□□□□ -0.75
HDGFL3-205ENST00000568129 UFL1O94874 794 aa10.34□□□□□ -0.75
HDGFL3-205ENST00000568129 POTEIP0CG38 1075 aa10.34□□□□□ -0.75
HDGFL3-205ENST00000568129 POTEJP0CG39 1038 aa10.34□□□□□ -0.75
HDGFL3-205ENST00000568129 EPS15P42566 896 aa10.34□□□□□ -0.75
HDGFL3-205ENST00000568129 HNRNPUQ00839 825 aaKnown RBP eCLIP10.34□□□□□ -0.75
HDGFL3-205ENST00000568129 INTS3Q68E01 1043 aaKnown RBP10.34□□□□□ -0.75
HDGFL3-205ENST00000568129 PODNQ7Z5L7 613 aa10.34□□□□□ -0.75
HDGFL3-205ENST00000568129 ANKRD44Q8N8A2 993 aa10.34□□□□□ -0.75
HDGFL3-205ENST00000568129 BCL2L13Q9BXK5 485 aa10.34□□□□□ -0.75
HDGFL3-205ENST00000568129 API5Q9BZZ5 524 aaKnown RBP10.34□□□□□ -0.75
HDGFL3-205ENST00000568129 ECE2O60344 883 aa10.33□□□□□ -0.76
HDGFL3-205ENST00000568129 RPS12P25398 132 aaKnown RBP10.33□□□□□ -0.76
HDGFL3-205ENST00000568129 CHRNDQ07001 517 aa10.33□□□□□ -0.76
HDGFL3-205ENST00000568129 CCDC57Q2TAC2 916 aa10.33□□□□□ -0.76
HDGFL3-205ENST00000568129 GMLQ99445 158 aa10.33□□□□□ -0.76
HDGFL3-205ENST00000568129 MPHOSPH8Q99549 860 aa10.33□□□□□ -0.76
HDGFL3-205ENST00000568129 DBNDD1Q9H9R9 158 aa10.33□□□□□ -0.76
HDGFL3-205ENST00000568129 KCNQ5Q9NR82 932 aa10.33□□□□□ -0.76
HDGFL3-205ENST00000568129 ADARB2Q9NS39 739 aaKnown RBP10.33□□□□□ -0.76
HDGFL3-205ENST00000568129 RIPOR2Q9Y4F9 1068 aa10.33□□□□□ -0.76
HDGFL3-205ENST00000568129 GJA3Q9Y6H8 435 aa10.33□□□□□ -0.76
HDGFL3-205ENST00000568129 KIF16BQ96L93 1317 aa10.33□□□□□ -0.76
HDGFL3-205ENST00000568129 PSMD14O00487 310 aa10.32□□□□□ -0.76
HDGFL3-205ENST00000568129 RIMBP2O15034 1052 aa10.32□□□□□ -0.76
HDGFL3-205ENST00000568129 RAD17O75943 681 aa10.32□□□□□ -0.76
HDGFL3-205ENST00000568129 GMPSP49915 693 aaPredicted RBP10.32□□□□□ -0.76
HDGFL3-205ENST00000568129 ZC3H15Q8WU90 426 aaKnown RBP10.32□□□□□ -0.76
HDGFL3-205ENST00000568129 GPR101Q96P66 508 aaPredicted RBP10.32□□□□□ -0.76
HDGFL3-205ENST00000568129 BICC1Q9H694 974 aaKnown RBP10.32□□□□□ -0.76
HDGFL3-205ENST00000568129 ZNF804BA4D1E1 1349 aa10.32□□□□□ -0.76
HDGFL3-205ENST00000568129 IPO8O15397 1037 aaKnown RBP10.31□□□□□ -0.76
HDGFL3-205ENST00000568129 LMOD1P29536 600 aaPredicted RBP10.31□□□□□ -0.76
HDGFL3-205ENST00000568129 RFX5P48382 616 aaPredicted RBP10.31□□□□□ -0.76
HDGFL3-205ENST00000568129 MMP14P50281 582 aa10.31□□□□□ -0.76
HDGFL3-205ENST00000568129 HIRAP54198 1017 aaPredicted RBP10.31□□□□□ -0.76
HDGFL3-205ENST00000568129 DOK7Q18PE1 504 aa10.31□□□□□ -0.76
HDGFL3-205ENST00000568129 TXNRD3Q86VQ6 643 aa10.31□□□□□ -0.76
HDGFL3-205ENST00000568129 AGBL3Q8NEM8 1001 aa10.31□□□□□ -0.76
HDGFL3-205ENST00000568129 COA1Q9GZY4 146 aa10.31□□□□□ -0.76
HDGFL3-205ENST00000568129 CNOT7Q9UIV1 285 aaKnown RBP10.31□□□□□ -0.76
HDGFL3-205ENST00000568129 BCAR3O75815 825 aa10.3□□□□□ -0.76
HDGFL3-205ENST00000568129 TRIM27P14373 513 aa10.3□□□□□ -0.76
HDGFL3-205ENST00000568129 ZNF280AP59817 542 aaPredicted RBP10.3□□□□□ -0.76
HDGFL3-205ENST00000568129 UBE4AQ14139 1066 aa10.3□□□□□ -0.76
HDGFL3-205ENST00000568129 ATF7IPQ6VMQ6 1270 aa10.3□□□□□ -0.76
HDGFL3-205ENST00000568129 LDHAL6AQ6ZMR3 332 aa10.3□□□□□ -0.76
HDGFL3-205ENST00000568129 CNTROBQ8N137 903 aa10.3□□□□□ -0.76
HDGFL3-205ENST00000568129 VGLL2Q8N8G2 317 aa10.3□□□□□ -0.76
HDGFL3-205ENST00000568129 ZNF594Q96JF6 807 aaPredicted RBP10.3□□□□□ -0.76
HDGFL3-205ENST00000568129 HDAC5Q9UQL6 1122 aa10.3□□□□□ -0.76
HDGFL3-205ENST00000568129 ECM29Q5VYK3 1845 aa10.29□□□□□ -0.76
HDGFL3-205ENST00000568129 USP17L3A6NCW0 530 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms