RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 DAXXQ9UER7 740 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-221ENST00000567935 TTC41PQ6P2S7 1318 aa17.88■□□□□ 0.45
COMMD4-221ENST00000567935 SDSP20132 328 aa17.87■□□□□ 0.45
COMMD4-221ENST00000567935 BECN1Q14457 450 aa17.87■□□□□ 0.45
COMMD4-221ENST00000567935 GIGYF2Q6Y7W6 1299 aaKnown RBP17.87■□□□□ 0.45
COMMD4-221ENST00000567935 NRXN2Q9P2S2 1712 aa17.86■□□□□ 0.45
COMMD4-221ENST00000567935 RBM25P49756 843 aaKnown RBP17.86■□□□□ 0.45
COMMD4-221ENST00000567935 USPL1Q5W0Q7 1092 aa17.86■□□□□ 0.45
COMMD4-221ENST00000567935 C2CD5Q86YS7 1000 aa17.86■□□□□ 0.45
COMMD4-221ENST00000567935 TAF1DQ9H5J8 278 aaPredicted RBP17.86■□□□□ 0.45
COMMD4-221ENST00000567935 CARMIL3Q8ND23 1372 aa17.86■□□□□ 0.45
COMMD4-221ENST00000567935 ANKRD36CQ5JPF3 1778 aa17.86■□□□□ 0.45
COMMD4-221ENST00000567935 ERC2O15083 957 aa17.85■□□□□ 0.45
COMMD4-221ENST00000567935 NFIXQ14938 502 aa17.85■□□□□ 0.45
COMMD4-221ENST00000567935 IL1RAPL2Q9NP60 686 aa17.85■□□□□ 0.45
COMMD4-221ENST00000567935 ZNF219Q9P2Y4 722 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-221ENST00000567935 THSD7BQ9C0I4 1608 aa17.84■□□□□ 0.45
COMMD4-221ENST00000567935 PCCAP05165 728 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-221ENST00000567935 PLA2G12BQ9BX93 195 aa17.84■□□□□ 0.45
COMMD4-221ENST00000567935 MCOLN1Q9GZU1 580 aa17.84■□□□□ 0.45
COMMD4-221ENST00000567935 TSKSQ9UJT2 592 aa17.84■□□□□ 0.45
COMMD4-221ENST00000567935 ZBTB1Q9Y2K1 713 aa17.84■□□□□ 0.45
COMMD4-221ENST00000567935 FER1L6Q2WGJ9 1857 aa17.84■□□□□ 0.45
COMMD4-221ENST00000567935 CDHR2Q9BYE9 1310 aa17.83■□□□□ 0.44
COMMD4-221ENST00000567935 RGL2O15211 777 aa17.83■□□□□ 0.44
COMMD4-221ENST00000567935 C21orf2O43822 256 aa17.83■□□□□ 0.44
COMMD4-221ENST00000567935 GLRX3O76003 335 aaKnown RBP17.83■□□□□ 0.44
COMMD4-221ENST00000567935 REC8O95072 547 aa17.83■□□□□ 0.44
COMMD4-221ENST00000567935 EIF5P55010 431 aaKnown RBP17.83■□□□□ 0.44
COMMD4-221ENST00000567935 EPHA10Q5JZY3 1008 aa17.83■□□□□ 0.44
COMMD4-221ENST00000567935 FBXO3Q9UK99 471 aa17.83■□□□□ 0.44
COMMD4-221ENST00000567935 PDE4DIPQ5VU43 2346 aa17.83■□□□□ 0.44
COMMD4-221ENST00000567935 IQCA1LA6NCM1 817 aa17.82■□□□□ 0.44
COMMD4-221ENST00000567935 EPB41L2O43491 1005 aaKnown RBP17.82■□□□□ 0.44
COMMD4-221ENST00000567935 SERPINB2P05120 415 aa17.82■□□□□ 0.44
COMMD4-221ENST00000567935 IFIT2P09913 472 aaKnown RBP17.82■□□□□ 0.44
COMMD4-221ENST00000567935 RFX5P48382 616 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-221ENST00000567935 FOXO4P98177 505 aa17.82■□□□□ 0.44
COMMD4-221ENST00000567935 EAPPQ56P03 285 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-221ENST00000567935 INTS5Q6P9B9 1019 aaKnown RBP17.82■□□□□ 0.44
COMMD4-221ENST00000567935 ZBTB38Q8NAP3 1195 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-221ENST00000567935 ZNF330Q9Y3S2 320 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-221ENST00000567935 ADAMTSL1Q8N6G6 1762 aa17.81■□□□□ 0.44
COMMD4-221ENST00000567935 H0YIN7 160 aa17.81■□□□□ 0.44
COMMD4-221ENST00000567935 ZPR1O75312 459 aa17.81■□□□□ 0.44
COMMD4-221ENST00000567935 DZIP3Q86Y13 1208 aaKnown RBP17.81■□□□□ 0.44
COMMD4-221ENST00000567935 L3MBTL3Q96JM7 780 aaPredicted RBP17.81■□□□□ 0.44
COMMD4-221ENST00000567935 ECHDC1Q9NTX5 307 aa17.81■□□□□ 0.44
COMMD4-221ENST00000567935 ABT1Q9ULW3 272 aaKnown RBP17.81■□□□□ 0.44
COMMD4-221ENST00000567935 PA2G4Q9UQ80 394 aaKnown RBP17.81■□□□□ 0.44
COMMD4-221ENST00000567935 SCN4AP35499 1836 aa17.8■□□□□ 0.44
COMMD4-221ENST00000567935 NUP98P52948 1817 aa17.8■□□□□ 0.44
COMMD4-221ENST00000567935 SASH1O94885 1247 aa17.8■□□□□ 0.44
COMMD4-221ENST00000567935 PTPN12Q05209 780 aaKnown RBP17.8■□□□□ 0.44
COMMD4-221ENST00000567935 LMBR1LQ6UX01 489 aa17.8■□□□□ 0.44
COMMD4-221ENST00000567935 NUTM1Q86Y26 1132 aa17.8■□□□□ 0.44
COMMD4-221ENST00000567935 CNTROBQ8N137 903 aa17.8■□□□□ 0.44
COMMD4-221ENST00000567935 PI4K2BQ8TCG2 481 aa17.8■□□□□ 0.44
COMMD4-221ENST00000567935 BCL11AQ9H165 835 aa17.8■□□□□ 0.44
COMMD4-221ENST00000567935 TAOK3Q9H2K8 898 aa17.8■□□□□ 0.44
COMMD4-221ENST00000567935 LTBP3Q9NS15 1303 aa17.79■□□□□ 0.44
COMMD4-221ENST00000567935 LTBP1Q14766 1721 aa17.79■□□□□ 0.44
COMMD4-221ENST00000567935 HSP90B1P14625 803 aaKnown RBP17.79■□□□□ 0.44
COMMD4-221ENST00000567935 GPR108Q9NPR9 543 aa17.79■□□□□ 0.44
COMMD4-221ENST00000567935 CLEC11AQ9Y240 323 aa17.79■□□□□ 0.44
COMMD4-221ENST00000567935 AK9Q5TCS8 1911 aa17.78■□□□□ 0.44
COMMD4-221ENST00000567935 TRIM6-TRIM34B2RNG4 842 aa17.78■□□□□ 0.44
COMMD4-221ENST00000567935 CIAO1O76071 339 aa17.78■□□□□ 0.44
COMMD4-221ENST00000567935 MAP1SQ66K74 1059 aaPredicted RBP17.78■□□□□ 0.44
COMMD4-221ENST00000567935 AACSQ86V21 672 aa17.78■□□□□ 0.44
COMMD4-221ENST00000567935 NLRP10Q86W26 655 aa17.78■□□□□ 0.44
COMMD4-221ENST00000567935 ZNF622Q969S3 477 aaKnown RBP eCLIP17.78■□□□□ 0.44
COMMD4-221ENST00000567935 BEGAINQ9BUH8 593 aa17.78■□□□□ 0.44
COMMD4-221ENST00000567935 BCL2L12Q9HB09 334 aa17.78■□□□□ 0.44
COMMD4-221ENST00000567935 IL15P40933 162 aaPredicted RBP17.77■□□□□ 0.44
COMMD4-221ENST00000567935 GRM1Q13255 1194 aa17.77■□□□□ 0.44
COMMD4-221ENST00000567935 PARP10Q53GL7 1025 aa17.77■□□□□ 0.44
COMMD4-221ENST00000567935 IL27Q8NEV9 243 aa17.77■□□□□ 0.44
COMMD4-221ENST00000567935 CAPNS2Q96L46 248 aa17.77■□□□□ 0.44
COMMD4-221ENST00000567935 ZNF652Q9Y2D9 606 aa17.77■□□□□ 0.44
COMMD4-221ENST00000567935 COL11A2P13942 1736 aaPredicted RBP17.77■□□□□ 0.44
COMMD4-221ENST00000567935 ANKRD31Q8N7Z5 1873 aa17.76■□□□□ 0.43
COMMD4-221ENST00000567935 CYP4F22Q6NT55 531 aa17.76■□□□□ 0.43
COMMD4-221ENST00000567935 PAXIP1Q6ZW49 1069 aaPredicted RBP17.76■□□□□ 0.43
COMMD4-221ENST00000567935 ZNF34Q8IZ26 560 aa17.76■□□□□ 0.43
COMMD4-221ENST00000567935 ZNF541Q9H0D2 1346 aa17.75■□□□□ 0.43
COMMD4-221ENST00000567935 CSF1RP07333 972 aa17.75■□□□□ 0.43
COMMD4-221ENST00000567935 CHMLP26374 656 aa17.75■□□□□ 0.43
COMMD4-221ENST00000567935 HLFQ16534 295 aa17.75■□□□□ 0.43
COMMD4-221ENST00000567935 CCDC57Q2TAC2 916 aa17.75■□□□□ 0.43
COMMD4-221ENST00000567935 JARID2Q92833 1246 aaPredicted RBP17.75■□□□□ 0.43
COMMD4-221ENST00000567935 RILPL2Q969X0 211 aa17.75■□□□□ 0.43
COMMD4-221ENST00000567935 GPR101Q96P66 508 aaPredicted RBP17.75■□□□□ 0.43
COMMD4-221ENST00000567935 SIL1Q9H173 461 aa17.75■□□□□ 0.43
COMMD4-221ENST00000567935 NARFQ9UHQ1 456 aa17.75■□□□□ 0.43
COMMD4-221ENST00000567935 MYH3P11055 1940 aa17.74■□□□□ 0.43
COMMD4-221ENST00000567935 EYA2O00167 538 aa17.74■□□□□ 0.43
COMMD4-221ENST00000567935 HIP1O00291 1037 aa17.74■□□□□ 0.43
COMMD4-221ENST00000567935 EPHX2P34913 555 aa17.74■□□□□ 0.43
COMMD4-221ENST00000567935 FMR1Q06787 632 aaKnown RBP eCLIP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms