RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 NBPF11Q86T75 865 aa7.02□□□□□ -1.29
CDH1-211ENST00000567320 GPR152Q8TDT2 470 aa7.02□□□□□ -1.29
CDH1-211ENST00000567320 COL26A1Q96A83 441 aa7.02□□□□□ -1.29
CDH1-211ENST00000567320 SOX18P35713 384 aa7.01□□□□□ -1.29
CDH1-211ENST00000567320 FOXD4L6Q3SYB3 417 aaPredicted RBP7.01□□□□□ -1.29
CDH1-211ENST00000567320 FOXD4L3Q6VB84 417 aaPredicted RBP7.01□□□□□ -1.29
CDH1-211ENST00000567320 ZMYND15Q9H091 742 aa7.01□□□□□ -1.29
CDH1-211ENST00000567320 ZFP64Q9NPA5 681 aa7.01□□□□□ -1.29
CDH1-211ENST00000567320 STIM2Q9P246 746 aa7.01□□□□□ -1.29
CDH1-211ENST00000567320 TRIM33Q9UPN9 1127 aa7.01□□□□□ -1.29
CDH1-211ENST00000567320 TNFRSF10BO14763 440 aa7□□□□□ -1.29
CDH1-211ENST00000567320 CDC25BP30305 580 aa7□□□□□ -1.29
CDH1-211ENST00000567320 HYAL2Q12891 473 aa7□□□□□ -1.29
CDH1-211ENST00000567320 FAM26DQ5JW98 314 aa7□□□□□ -1.29
CDH1-211ENST00000567320 ILDR2Q71H61 639 aa7□□□□□ -1.29
CDH1-211ENST00000567320 AKTIPQ9H8T0 292 aa7□□□□□ -1.29
CDH1-211ENST00000567320 FAM177BA6PVY3 158 aa6.99□□□□□ -1.29
CDH1-211ENST00000567320 DLL1O00548 723 aa6.99□□□□□ -1.29
CDH1-211ENST00000567320 ALX3O95076 343 aa6.99□□□□□ -1.29
CDH1-211ENST00000567320 ARTNQ5T4W7 220 aa6.99□□□□□ -1.29
CDH1-211ENST00000567320 CEP135Q66GS9 1140 aa6.99□□□□□ -1.29
CDH1-211ENST00000567320 ABTB2Q8N961 1025 aa6.99□□□□□ -1.29
CDH1-211ENST00000567320 DCAF11Q8TEB1 546 aa6.99□□□□□ -1.29
CDH1-211ENST00000567320 PBXIP1Q96AQ6 731 aa6.99□□□□□ -1.29
CDH1-211ENST00000567320 LACRTQ9GZZ8 138 aa6.99□□□□□ -1.29
CDH1-211ENST00000567320 MRPL18Q9H0U6 180 aaKnown RBP6.99□□□□□ -1.29
CDH1-211ENST00000567320 PPME1Q9Y570 386 aa6.99□□□□□ -1.29
CDH1-211ENST00000567320 SMNDC1O75940 238 aaKnown RBP eCLIP6.98□□□□□ -1.29
CDH1-211ENST00000567320 ATP2B4P23634 1241 aa6.98□□□□□ -1.29
CDH1-211ENST00000567320 SRPK2P78362 688 aaKnown RBP6.98□□□□□ -1.29
CDH1-211ENST00000567320 ATP11AP98196 1134 aa6.98□□□□□ -1.29
CDH1-211ENST00000567320 NCAPG2Q86XI2 1143 aa6.98□□□□□ -1.29
CDH1-211ENST00000567320 TTC16Q8NEE8 873 aa6.98□□□□□ -1.29
CDH1-211ENST00000567320 OR13H1Q8NG92 308 aa6.98□□□□□ -1.29
CDH1-211ENST00000567320 CLP1Q92989 425 aaKnown RBP6.98□□□□□ -1.29
CDH1-211ENST00000567320 MEGF10Q96KG7 1140 aa6.98□□□□□ -1.29
CDH1-211ENST00000567320 SSBP4Q9BWG4 385 aaPredicted RBP6.98□□□□□ -1.29
CDH1-211ENST00000567320 SERPINA10Q9UK55 444 aa6.98□□□□□ -1.29
CDH1-211ENST00000567320 LINC01387J3KSC0 135 aa6.97□□□□□ -1.29
CDH1-211ENST00000567320 ZBTB39O15060 712 aa6.97□□□□□ -1.29
CDH1-211ENST00000567320 GLB1P16278 677 aa6.97□□□□□ -1.29
CDH1-211ENST00000567320 TXNDC11Q6PKC3 985 aa6.97□□□□□ -1.29
CDH1-211ENST00000567320 MAP4K3Q8IVH8 894 aa6.97□□□□□ -1.29
CDH1-211ENST00000567320 MUC3BQ9H195 1237 aa6.97□□□□□ -1.29
CDH1-211ENST00000567320 SRA1Q9HD15 236 aaKnown RBP6.97□□□□□ -1.29
CDH1-211ENST00000567320 ARID3CA6NKF2 412 aa6.96□□□□□ -1.3
CDH1-211ENST00000567320 HOXD8P13378 290 aaPredicted RBP6.96□□□□□ -1.3
CDH1-211ENST00000567320 SETDB1Q15047 1291 aa6.96□□□□□ -1.3
CDH1-211ENST00000567320 COL13A1Q5TAT6 717 aaPredicted RBP6.96□□□□□ -1.3
CDH1-211ENST00000567320 CACTIN-AS1Q8N1I8 211 aa6.96□□□□□ -1.3
CDH1-211ENST00000567320 AGGF1Q8N302 714 aaeCLIP6.96□□□□□ -1.3
CDH1-211ENST00000567320 ABI2Q9NYB9 513 aaPredicted RBP6.96□□□□□ -1.3
CDH1-211ENST00000567320 SEPT3Q9UH03 358 aa6.96□□□□□ -1.3
CDH1-211ENST00000567320 F8W735 103 aaPredicted RBP6.95□□□□□ -1.3
CDH1-211ENST00000567320 CDC27P30260 824 aa6.95□□□□□ -1.3
CDH1-211ENST00000567320 FAM117BQ6P1L5 589 aa6.95□□□□□ -1.3
CDH1-211ENST00000567320 PRR23CQ6ZRP0 262 aa6.95□□□□□ -1.3
CDH1-211ENST00000567320 ZNF438Q7Z4V0 828 aa6.95□□□□□ -1.3
CDH1-211ENST00000567320 ATCAYQ86WG3 371 aa6.95□□□□□ -1.3
CDH1-211ENST00000567320 NUDT16Q96DE0 195 aaKnown RBP6.95□□□□□ -1.3
CDH1-211ENST00000567320 RASSF4Q9H2L5 321 aa6.95□□□□□ -1.3
CDH1-211ENST00000567320 CYP2E1P05181 493 aaPredicted RBP6.94□□□□□ -1.3
CDH1-211ENST00000567320 PCSK2P16519 638 aa6.94□□□□□ -1.3
CDH1-211ENST00000567320 DNM1Q05193 864 aaKnown RBP6.94□□□□□ -1.3
CDH1-211ENST00000567320 LRP8Q14114 963 aa6.94□□□□□ -1.3
CDH1-211ENST00000567320 ELP3Q9H9T3 547 aa6.94□□□□□ -1.3
CDH1-211ENST00000567320 AAMPQ13685 434 aa6.93□□□□□ -1.3
CDH1-211ENST00000567320 C8orf34Q49A92 452 aa6.93□□□□□ -1.3
CDH1-211ENST00000567320 TMEM130Q8N3G9 435 aa6.93□□□□□ -1.3
CDH1-211ENST00000567320 CARD10Q9BWT7 1032 aa6.93□□□□□ -1.3
CDH1-211ENST00000567320 KANSL3Q9P2N6 904 aa6.93□□□□□ -1.3
CDH1-211ENST00000567320 HYAL3O43820 417 aaPredicted RBP6.92□□□□□ -1.3
CDH1-211ENST00000567320 PTPRAP18433 802 aa6.92□□□□□ -1.3
CDH1-211ENST00000567320 CD68P34810 354 aaPredicted RBP6.92□□□□□ -1.3
CDH1-211ENST00000567320 PDE12Q6L8Q7 609 aaKnown RBP6.92□□□□□ -1.3
CDH1-211ENST00000567320 ACAD11Q709F0 780 aa6.92□□□□□ -1.3
CDH1-211ENST00000567320 DZIP1LQ8IYY4 767 aaKnown RBP6.92□□□□□ -1.3
CDH1-211ENST00000567320 GALNT11Q8NCW6 608 aa6.92□□□□□ -1.3
CDH1-211ENST00000567320 EDEM1Q92611 657 aa6.92□□□□□ -1.3
CDH1-211ENST00000567320 PBX4Q9BYU1 374 aa6.92□□□□□ -1.3
CDH1-211ENST00000567320 SH2B1Q9NRF2 756 aaPredicted RBP6.92□□□□□ -1.3
CDH1-211ENST00000567320 TMEM63CQ9P1W3 806 aa6.92□□□□□ -1.3
CDH1-211ENST00000567320 SLAIN2Q9P270 581 aa6.92□□□□□ -1.3
CDH1-211ENST00000567320 RPLP1P05386 114 aaKnown RBP6.91□□□□□ -1.3
CDH1-211ENST00000567320 FSTP19883 344 aa6.91□□□□□ -1.3
CDH1-211ENST00000567320 CES1P23141 567 aa6.91□□□□□ -1.3
CDH1-211ENST00000567320 FSCN2O14926 492 aa6.9□□□□□ -1.3
CDH1-211ENST00000567320 CABP4P57796 275 aa6.9□□□□□ -1.3
CDH1-211ENST00000567320 DUOXA2Q1HG44 320 aa6.9□□□□□ -1.3
CDH1-211ENST00000567320 NOM1Q5C9Z4 860 aaKnown RBP6.9□□□□□ -1.3
CDH1-211ENST00000567320 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.9□□□□□ -1.3
CDH1-211ENST00000567320 KIF4AO95239 1232 aa6.89□□□□□ -1.31
CDH1-211ENST00000567320 WISP1O95388 367 aa6.89□□□□□ -1.31
CDH1-211ENST00000567320 EPHA1P21709 976 aa6.89□□□□□ -1.31
CDH1-211ENST00000567320 HELQQ8TDG4 1101 aa6.89□□□□□ -1.31
CDH1-211ENST00000567320 PSMG3-AS1Q96PY0 264 aa6.89□□□□□ -1.31
CDH1-211ENST00000567320 CEP41Q9BYV8 373 aa6.89□□□□□ -1.31
CDH1-211ENST00000567320 PCMTD2Q9NV79 361 aa6.89□□□□□ -1.31
CDH1-211ENST00000567320 CNTN3Q9P232 1028 aa6.89□□□□□ -1.31
CDH1-211ENST00000567320 STOML1Q9UBI4 398 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms