RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 BLOC1S2Q6QNY1 142 aa19.93■□□□□ 0.78
CMTM3-213ENST00000566756 FSD1Q9BTV5 496 aa19.93■□□□□ 0.78
CMTM3-213ENST00000566756 CCDC8Q9H0W5 538 aaPredicted RBP19.93■□□□□ 0.78
CMTM3-213ENST00000566756 A0A087WZG4 1122 aa19.92■□□□□ 0.78
CMTM3-213ENST00000566756 H7C1W4 665 aa19.92■□□□□ 0.78
CMTM3-213ENST00000566756 ATP5JP18859 108 aa19.92■□□□□ 0.78
CMTM3-213ENST00000566756 RPS6KB1P23443 525 aa19.92■□□□□ 0.78
CMTM3-213ENST00000566756 RABL6Q3YEC7 729 aaPredicted RBP19.92■□□□□ 0.78
CMTM3-213ENST00000566756 TPCN1Q9ULQ1 816 aa19.92■□□□□ 0.78
CMTM3-213ENST00000566756 RREB1Q92766 1687 aa19.92■□□□□ 0.78
CMTM3-213ENST00000566756 A0A0D9SFI3 127 aa19.92■□□□□ 0.78
CMTM3-213ENST00000566756 ATP5J2-PTCD1G3V325 749 aa19.92■□□□□ 0.78
CMTM3-213ENST00000566756 FIBPO43427 364 aa19.92■□□□□ 0.78
CMTM3-213ENST00000566756 PTMAP06454 111 aaKnown RBP19.92■□□□□ 0.78
CMTM3-213ENST00000566756 TRIM28Q13263 835 aaKnown RBP19.92■□□□□ 0.78
CMTM3-213ENST00000566756 LARP6Q9BRS8 491 aaKnown RBP19.92■□□□□ 0.78
CMTM3-213ENST00000566756 CWC25Q9NXE8 425 aaPredicted RBP19.92■□□□□ 0.78
CMTM3-213ENST00000566756 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.92■□□□□ 0.78
CMTM3-213ENST00000566756 DNM1Q05193 864 aaKnown RBP19.91■□□□□ 0.78
CMTM3-213ENST00000566756 KIF6Q6ZMV9 814 aa19.91■□□□□ 0.78
CMTM3-213ENST00000566756 SMARCC1Q92922 1105 aaPredicted RBP19.91■□□□□ 0.78
CMTM3-213ENST00000566756 ACSBG1Q96GR2 724 aa19.91■□□□□ 0.78
CMTM3-213ENST00000566756 ISCA1Q9BUE6 129 aa19.91■□□□□ 0.78
CMTM3-213ENST00000566756 ZBTB3Q9H5J0 574 aa19.91■□□□□ 0.78
CMTM3-213ENST00000566756 IL6STP40189 918 aaPredicted RBP19.9■□□□□ 0.78
CMTM3-213ENST00000566756 KRT85P78386 507 aa19.9■□□□□ 0.78
CMTM3-213ENST00000566756 KIAA2012Q0VF49 1180 aa19.9■□□□□ 0.78
CMTM3-213ENST00000566756 TCIRG1Q13488 830 aa19.9■□□□□ 0.78
CMTM3-213ENST00000566756 BOLA2Q9H3K6 86 aa19.9■□□□□ 0.78
CMTM3-213ENST00000566756 TLR7Q9NYK1 1049 aaKnown RBP19.9■□□□□ 0.78
CMTM3-213ENST00000566756 ANKRD36CQ5JPF3 1778 aa19.9■□□□□ 0.78
CMTM3-213ENST00000566756 RFX5P48382 616 aaPredicted RBP19.9■□□□□ 0.78
CMTM3-213ENST00000566756 LARP1BQ659C4 914 aaKnown RBP19.9■□□□□ 0.78
CMTM3-213ENST00000566756 UBE3BQ7Z3V4 1068 aa19.9■□□□□ 0.78
CMTM3-213ENST00000566756 MAP3K15Q6ZN16 1313 aa19.89■□□□□ 0.77
CMTM3-213ENST00000566756 EPHA10Q5JZY3 1008 aa19.89■□□□□ 0.77
CMTM3-213ENST00000566756 MEX3CQ5U5Q3 659 aaKnown RBP19.89■□□□□ 0.77
CMTM3-213ENST00000566756 NUP98P52948 1817 aa19.89■□□□□ 0.77
CMTM3-213ENST00000566756 KDM4AO75164 1064 aa19.88■□□□□ 0.77
CMTM3-213ENST00000566756 TAF5LO75529 589 aa19.88■□□□□ 0.77
CMTM3-213ENST00000566756 LOC102724428A0A0B4J2F2 783 aa19.88■□□□□ 0.77
CMTM3-213ENST00000566756 VPS37CA5D8V6 355 aaPredicted RBP19.88■□□□□ 0.77
CMTM3-213ENST00000566756 SIK1P57059 783 aa19.88■□□□□ 0.77
CMTM3-213ENST00000566756 GIGYF2Q6Y7W6 1299 aaKnown RBP19.88■□□□□ 0.77
CMTM3-213ENST00000566756 GJD4Q96KN9 370 aaPredicted RBP19.88■□□□□ 0.77
CMTM3-213ENST00000566756 ZBTB1Q9Y2K1 713 aa19.88■□□□□ 0.77
CMTM3-213ENST00000566756 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.88■□□□□ 0.77
CMTM3-213ENST00000566756 HCLS1P14317 486 aaPredicted RBP19.87■□□□□ 0.77
CMTM3-213ENST00000566756 GLIPR1L2Q4G1C9 344 aa19.87■□□□□ 0.77
CMTM3-213ENST00000566756 TNNI3KQ59H18 835 aa19.87■□□□□ 0.77
CMTM3-213ENST00000566756 SCAND2PQ9GZW5 306 aaPredicted RBP19.87■□□□□ 0.77
CMTM3-213ENST00000566756 SIL1Q9H173 461 aa19.87■□□□□ 0.77
CMTM3-213ENST00000566756 R3HCC1Q9Y3T6 440 aaKnown RBP19.87■□□□□ 0.77
CMTM3-213ENST00000566756 FPGT-TNNI3KV9GXZ4 949 aa19.87■□□□□ 0.77
CMTM3-213ENST00000566756 COL5A3P25940 1745 aaPredicted RBP19.87■□□□□ 0.77
CMTM3-213ENST00000566756 PALLDQ8WX93 1383 aa19.87■□□□□ 0.77
CMTM3-213ENST00000566756 ONECUT3O60422 494 aaPredicted RBP19.86■□□□□ 0.77
CMTM3-213ENST00000566756 ATRNO75882 1429 aa19.86■□□□□ 0.77
CMTM3-213ENST00000566756 ADCY5O95622 1261 aa19.86■□□□□ 0.77
CMTM3-213ENST00000566756 PTPN12Q05209 780 aaKnown RBP19.86■□□□□ 0.77
CMTM3-213ENST00000566756 TOB2Q14106 344 aaPredicted RBP19.86■□□□□ 0.77
CMTM3-213ENST00000566756 HSP90AB3PQ58FF7 597 aa19.86■□□□□ 0.77
CMTM3-213ENST00000566756 NECAB1Q8N987 351 aa19.86■□□□□ 0.77
CMTM3-213ENST00000566756 USP25Q9UHP3 1055 aa19.86■□□□□ 0.77
CMTM3-213ENST00000566756 ERVV-1B6SEH8 477 aa19.86■□□□□ 0.77
CMTM3-213ENST00000566756 TPM3P06753 285 aa19.86■□□□□ 0.77
CMTM3-213ENST00000566756 PRKCSHP14314 528 aaPredicted RBP19.86■□□□□ 0.77
CMTM3-213ENST00000566756 ATP6V1AP38606 617 aa19.86■□□□□ 0.77
CMTM3-213ENST00000566756 SASS6Q6UVJ0 657 aa19.86■□□□□ 0.77
CMTM3-213ENST00000566756 PDCL3Q9H2J4 239 aa19.86■□□□□ 0.77
CMTM3-213ENST00000566756 U3KPZ7 1027 aaPredicted RBP19.86■□□□□ 0.77
CMTM3-213ENST00000566756 MYH14Q7Z406 1995 aaKnown RBP19.85■□□□□ 0.77
CMTM3-213ENST00000566756 AFF2P51816 1311 aa19.85■□□□□ 0.77
CMTM3-213ENST00000566756 NHSQ6T4R5 1651 aa19.85■□□□□ 0.77
CMTM3-213ENST00000566756 CCDC192P0DO97 292 aa19.85■□□□□ 0.77
CMTM3-213ENST00000566756 PIBF1Q8WXW3 757 aa19.85■□□□□ 0.77
CMTM3-213ENST00000566756 DBNLQ9UJU6 430 aaKnown RBP19.85■□□□□ 0.77
CMTM3-213ENST00000566756 KCNQ2O43526 872 aa19.84■□□□□ 0.77
CMTM3-213ENST00000566756 ZNF589Q86UQ0 364 aaPredicted RBP19.84■□□□□ 0.77
CMTM3-213ENST00000566756 MAP7D2Q96T17 732 aa19.84■□□□□ 0.77
CMTM3-213ENST00000566756 CCDC87Q9NVE4 849 aa19.84■□□□□ 0.77
CMTM3-213ENST00000566756 ZNF330Q9Y3S2 320 aaPredicted RBP19.84■□□□□ 0.77
CMTM3-213ENST00000566756 EIF5P55010 431 aaKnown RBP19.84■□□□□ 0.77
CMTM3-213ENST00000566756 FOXO4P98177 505 aa19.84■□□□□ 0.77
CMTM3-213ENST00000566756 INTS5Q6P9B9 1019 aaKnown RBP19.84■□□□□ 0.77
CMTM3-213ENST00000566756 TTC6Q86TZ1 520 aa19.84■□□□□ 0.77
CMTM3-213ENST00000566756 HAUS7Q99871 368 aa19.84■□□□□ 0.77
CMTM3-213ENST00000566756 TRPC5Q9UL62 973 aaPredicted RBP19.84■□□□□ 0.77
CMTM3-213ENST00000566756 DYNC1I1O14576 645 aa19.83■□□□□ 0.77
CMTM3-213ENST00000566756 GIMAP6Q6P9H5 292 aa19.83■□□□□ 0.77
CMTM3-213ENST00000566756 CDC37L1Q7L3B6 337 aa19.83■□□□□ 0.77
CMTM3-213ENST00000566756 A0A0G2JS52 829 aa19.83■□□□□ 0.76
CMTM3-213ENST00000566756 KLHDC4Q8TBB5 520 aa19.83■□□□□ 0.76
CMTM3-213ENST00000566756 JARID2Q92833 1246 aaPredicted RBP19.83■□□□□ 0.76
CMTM3-213ENST00000566756 GPR108Q9NPR9 543 aa19.83■□□□□ 0.76
CMTM3-213ENST00000566756 BTAF1O14981 1849 aa19.82■□□□□ 0.76
CMTM3-213ENST00000566756 PCCAP05165 728 aaPredicted RBP19.82■□□□□ 0.76
CMTM3-213ENST00000566756 CRKLP46109 303 aaKnown RBP19.82■□□□□ 0.76
CMTM3-213ENST00000566756 TFCP2Q12800 502 aa19.82■□□□□ 0.76
CMTM3-213ENST00000566756 ITPK1Q13572 414 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms