RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 SRGAP3O43295 1099 aa10.2□□□□□ -0.78
CDH13-208ENST00000566333 BBOX1O75936 387 aa10.2□□□□□ -0.78
CDH13-208ENST00000566333 PRELPP51888 382 aa10.2□□□□□ -0.78
CDH13-208ENST00000566333 CCDC57Q2TAC2 916 aa10.2□□□□□ -0.78
CDH13-208ENST00000566333 CCDC93Q567U6 631 aa10.2□□□□□ -0.78
CDH13-208ENST00000566333 TMC4Q7Z404 712 aa10.2□□□□□ -0.78
CDH13-208ENST00000566333 LTBP3Q9NS15 1303 aa10.2□□□□□ -0.78
CDH13-208ENST00000566333 BSDC1Q9NW68 430 aaPredicted RBP10.2□□□□□ -0.78
CDH13-208ENST00000566333 ZNF219Q9P2Y4 722 aaPredicted RBP10.2□□□□□ -0.78
CDH13-208ENST00000566333 PA2G4Q9UQ80 394 aaKnown RBP10.2□□□□□ -0.78
CDH13-208ENST00000566333 ZNF609O15014 1411 aa10.19□□□□□ -0.78
CDH13-208ENST00000566333 IGHMBP2P38935 993 aaKnown RBP10.19□□□□□ -0.78
CDH13-208ENST00000566333 ATP8B2P98198 1209 aa10.19□□□□□ -0.78
CDH13-208ENST00000566333 RASSF7Q02833 373 aa10.19□□□□□ -0.78
CDH13-208ENST00000566333 LRRC24Q50LG9 513 aa10.19□□□□□ -0.78
CDH13-208ENST00000566333 ATG9AQ7Z3C6 839 aa10.19□□□□□ -0.78
CDH13-208ENST00000566333 SP8Q8IXZ3 490 aa10.19□□□□□ -0.78
CDH13-208ENST00000566333 PELP1Q8IZL8 1130 aaKnown RBP10.19□□□□□ -0.78
CDH13-208ENST00000566333 VGLL2Q8N8G2 317 aa10.19□□□□□ -0.78
CDH13-208ENST00000566333 COPRSQ9NQ92 184 aa10.19□□□□□ -0.78
CDH13-208ENST00000566333 MINPP1Q9UNW1 487 aa10.19□□□□□ -0.78
CDH13-208ENST00000566333 PCDHB15Q9Y5E8 787 aa10.19□□□□□ -0.78
CDH13-208ENST00000566333 IRS2Q9Y4H2 1338 aa10.18□□□□□ -0.78
CDH13-208ENST00000566333 AKAP11Q9UKA4 1901 aa10.18□□□□□ -0.78
CDH13-208ENST00000566333 GPSM2P81274 684 aa10.18□□□□□ -0.78
CDH13-208ENST00000566333 SOGA3Q5TF21 947 aa10.18□□□□□ -0.78
CDH13-208ENST00000566333 RTFDC1Q9BY42 306 aaPredicted RBP10.18□□□□□ -0.78
CDH13-208ENST00000566333 CHMP4BQ9H444 224 aaKnown RBP10.18□□□□□ -0.78
CDH13-208ENST00000566333 PODXL2Q9NZ53 605 aa10.18□□□□□ -0.78
CDH13-208ENST00000566333 RIPOR2Q9Y4F9 1068 aa10.18□□□□□ -0.78
CDH13-208ENST00000566333 XDHP47989 1333 aa10.17□□□□□ -0.78
CDH13-208ENST00000566333 WTIPA6NIX2 430 aaPredicted RBP10.17□□□□□ -0.78
CDH13-208ENST00000566333 EYA2O00167 538 aa10.17□□□□□ -0.78
CDH13-208ENST00000566333 CIAO1O76071 339 aa10.17□□□□□ -0.78
CDH13-208ENST00000566333 FKBP4Q02790 459 aaKnown RBP eCLIP10.17□□□□□ -0.78
CDH13-208ENST00000566333 CHRNDQ07001 517 aa10.17□□□□□ -0.78
CDH13-208ENST00000566333 GPR162Q16538 588 aa10.17□□□□□ -0.78
CDH13-208ENST00000566333 TAF7LQ5H9L4 462 aa10.17□□□□□ -0.78
CDH13-208ENST00000566333 CC2D2BQ6DHV5 1058 aa10.17□□□□□ -0.78
CDH13-208ENST00000566333 LDHAL6AQ6ZMR3 332 aa10.17□□□□□ -0.78
CDH13-208ENST00000566333 RPAP2Q8IXW5 612 aaPredicted RBP10.17□□□□□ -0.78
CDH13-208ENST00000566333 PSMD1Q99460 953 aa10.17□□□□□ -0.78
CDH13-208ENST00000566333 MPHOSPH8Q99549 860 aa10.17□□□□□ -0.78
CDH13-208ENST00000566333 SIL1Q9H173 461 aa10.17□□□□□ -0.78
CDH13-208ENST00000566333 TAOK3Q9H2K8 898 aa10.17□□□□□ -0.78
CDH13-208ENST00000566333 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.17□□□□□ -0.78
CDH13-208ENST00000566333 SNAP23O00161 211 aa10.16□□□□□ -0.78
CDH13-208ENST00000566333 KLRK1P26718 216 aa10.16□□□□□ -0.78
CDH13-208ENST00000566333 AAMPQ13685 434 aa10.16□□□□□ -0.78
CDH13-208ENST00000566333 RTKN2Q8IZC4 609 aa10.16□□□□□ -0.78
CDH13-208ENST00000566333 TBC1D16Q8TBP0 767 aa10.16□□□□□ -0.78
CDH13-208ENST00000566333 GPR101Q96P66 508 aaPredicted RBP10.16□□□□□ -0.78
CDH13-208ENST00000566333 CNNM1Q9NRU3 951 aa10.16□□□□□ -0.78
CDH13-208ENST00000566333 POLLQ9UGP5 575 aa10.16□□□□□ -0.78
CDH13-208ENST00000566333 FBXO3Q9UK99 471 aa10.16□□□□□ -0.78
CDH13-208ENST00000566333 NOP58Q9Y2X3 529 aaKnown RBP10.16□□□□□ -0.78
CDH13-208ENST00000566333 MYO5AQ9Y4I1 1855 aaKnown RBP10.16□□□□□ -0.78
CDH13-208ENST00000566333 MED23Q9ULK4 1368 aa10.15□□□□□ -0.78
CDH13-208ENST00000566333 MROH5Q6ZUA9 1318 aa10.15□□□□□ -0.78
CDH13-208ENST00000566333 GRIN3BO60391 1043 aa10.15□□□□□ -0.78
CDH13-208ENST00000566333 TAF5LO75529 589 aa10.15□□□□□ -0.78
CDH13-208ENST00000566333 UFL1O94874 794 aa10.15□□□□□ -0.78
CDH13-208ENST00000566333 GRIPAP1Q4V328 841 aa10.15□□□□□ -0.78
CDH13-208ENST00000566333 DPP8Q6V1X1 898 aaPredicted RBP10.15□□□□□ -0.78
CDH13-208ENST00000566333 MPNDQ8N594 471 aa10.15□□□□□ -0.78
CDH13-208ENST00000566333 HELBQ8NG08 1087 aaPredicted RBP10.15□□□□□ -0.78
CDH13-208ENST00000566333 ZNF277Q9NRM2 450 aaPredicted RBP10.15□□□□□ -0.78
CDH13-208ENST00000566333 DOCK2Q92608 1830 aa10.14□□□□□ -0.79
CDH13-208ENST00000566333 ADAMTSL1Q8N6G6 1762 aa10.14□□□□□ -0.79
CDH13-208ENST00000566333 SASH1O94885 1247 aa10.14□□□□□ -0.79
CDH13-208ENST00000566333 FGFR2P21802 821 aa10.14□□□□□ -0.79
CDH13-208ENST00000566333 IL15P40933 162 aaPredicted RBP10.14□□□□□ -0.79
CDH13-208ENST00000566333 METTL24Q5JXM2 366 aa10.14□□□□□ -0.79
CDH13-208ENST00000566333 ARHGAP27Q6ZUM4 889 aa10.14□□□□□ -0.79
CDH13-208ENST00000566333 ANKRD2Q9GZV1 360 aa10.14□□□□□ -0.79
CDH13-208ENST00000566333 ANKIB1Q9P2G1 1089 aa10.14□□□□□ -0.79
CDH13-208ENST00000566333 GGA1Q9UJY5 639 aa10.14□□□□□ -0.79
CDH13-208ENST00000566333 NSFL1CQ9UNZ2 370 aaKnown RBP10.14□□□□□ -0.79
CDH13-208ENST00000566333 EXOC6BQ9Y2D4 811 aa10.14□□□□□ -0.79
CDH13-208ENST00000566333 COL1A1P02452 1464 aaPredicted RBP10.14□□□□□ -0.79
CDH13-208ENST00000566333 MAST2Q6P0Q8 1798 aa10.14□□□□□ -0.79
CDH13-208ENST00000566333 MYH7P12883 1935 aa10.13□□□□□ -0.79
CDH13-208ENST00000566333 ZNF804BA4D1E1 1349 aa10.13□□□□□ -0.79
CDH13-208ENST00000566333 HMMRO75330 724 aa10.13□□□□□ -0.79
CDH13-208ENST00000566333 PDE8BO95263 885 aa10.13□□□□□ -0.79
CDH13-208ENST00000566333 IARSP41252 1262 aaKnown RBP10.13□□□□□ -0.79
CDH13-208ENST00000566333 KIAA2012Q0VF49 1180 aa10.13□□□□□ -0.79
CDH13-208ENST00000566333 HDAC1Q13547 482 aaPredicted RBP10.13□□□□□ -0.79
CDH13-208ENST00000566333 AOC3Q16853 763 aa10.13□□□□□ -0.79
CDH13-208ENST00000566333 C15orf52Q6ZUT6 534 aaKnown RBP10.13□□□□□ -0.79
CDH13-208ENST00000566333 TXNRD3Q86VQ6 643 aa10.13□□□□□ -0.79
CDH13-208ENST00000566333 WDR90Q96KV7 1748 aa10.13□□□□□ -0.79
CDH13-208ENST00000566333 SURF6O75683 361 aaKnown RBP10.12□□□□□ -0.79
CDH13-208ENST00000566333 LMNB1P20700 586 aa10.12□□□□□ -0.79
CDH13-208ENST00000566333 ATP2B4P23634 1241 aa10.12□□□□□ -0.79
CDH13-208ENST00000566333 TFCP2Q12800 502 aa10.12□□□□□ -0.79
CDH13-208ENST00000566333 PUM3Q15397 648 aaKnown RBP10.12□□□□□ -0.79
CDH13-208ENST00000566333 LEMD3Q9Y2U8 911 aa10.12□□□□□ -0.79
CDH13-208ENST00000566333 ECM29Q5VYK3 1845 aa10.12□□□□□ -0.79
CDH13-208ENST00000566333 C6orf229H3BNL8 230 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms