RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 DAXXQ9UER7 740 aaPredicted RBP10.77□□□□□ -0.69
LSM3P5-201ENST00000566307 CHMP3Q9Y3E7 222 aa10.77□□□□□ -0.69
LSM3P5-201ENST00000566307 RTCBQ9Y3I0 505 aaKnown RBP10.77□□□□□ -0.69
LSM3P5-201ENST00000566307 RIPOR2Q9Y4F9 1068 aa10.77□□□□□ -0.69
LSM3P5-201ENST00000566307 RGPD3A6NKT7 1758 aaPredicted RBP10.76□□□□□ -0.69
LSM3P5-201ENST00000566307 RGPD4Q7Z3J3 1758 aa10.76□□□□□ -0.69
LSM3P5-201ENST00000566307 ITGA6P23229 1130 aa10.76□□□□□ -0.69
LSM3P5-201ENST00000566307 SF3B3Q15393 1217 aaKnown RBP10.76□□□□□ -0.69
LSM3P5-201ENST00000566307 ARXQ96QS3 562 aa10.76□□□□□ -0.69
LSM3P5-201ENST00000566307 HAUS7Q99871 368 aa10.76□□□□□ -0.69
LSM3P5-201ENST00000566307 NYXQ9GZU5 481 aa10.76□□□□□ -0.69
LSM3P5-201ENST00000566307 CCDC8Q9H0W5 538 aaPredicted RBP10.76□□□□□ -0.69
LSM3P5-201ENST00000566307 BCL2L12Q9HB09 334 aa10.76□□□□□ -0.69
LSM3P5-201ENST00000566307 TLR7Q9NYK1 1049 aaKnown RBP10.76□□□□□ -0.69
LSM3P5-201ENST00000566307 NIP7Q9Y221 180 aaKnown RBP eCLIP10.76□□□□□ -0.69
LSM3P5-201ENST00000566307 MROH5Q6ZUA9 1318 aa10.76□□□□□ -0.69
LSM3P5-201ENST00000566307 C4AP0C0L4 1744 aa10.75□□□□□ -0.69
LSM3P5-201ENST00000566307 UBR3Q6ZT12 1888 aa10.75□□□□□ -0.69
LSM3P5-201ENST00000566307 MCCP23508 829 aa10.75□□□□□ -0.69
LSM3P5-201ENST00000566307 CCDC152Q4G0S7 254 aa10.75□□□□□ -0.69
LSM3P5-201ENST00000566307 LRRC24Q50LG9 513 aa10.75□□□□□ -0.69
LSM3P5-201ENST00000566307 RTL5Q5HYW3 569 aaPredicted RBP10.75□□□□□ -0.69
LSM3P5-201ENST00000566307 VGLL2Q8N8G2 317 aa10.75□□□□□ -0.69
LSM3P5-201ENST00000566307 DBNDD2Q9BQY9 259 aa10.75□□□□□ -0.69
LSM3P5-201ENST00000566307 TBC1D2Q9BYX2 928 aa10.75□□□□□ -0.69
LSM3P5-201ENST00000566307 GREM2Q9H772 168 aa10.75□□□□□ -0.69
LSM3P5-201ENST00000566307 ARAP2Q8WZ64 1704 aa10.75□□□□□ -0.69
LSM3P5-201ENST00000566307 A0A1B0GUL7 405 aa10.74□□□□□ -0.69
LSM3P5-201ENST00000566307 PLSCR1O15162 318 aa10.74□□□□□ -0.69
LSM3P5-201ENST00000566307 GNPATO15228 680 aa10.74□□□□□ -0.69
LSM3P5-201ENST00000566307 TAF7LQ5H9L4 462 aa10.74□□□□□ -0.69
LSM3P5-201ENST00000566307 ERICH6Q7L0X2 663 aa10.74□□□□□ -0.69
LSM3P5-201ENST00000566307 ZNF594Q96JF6 807 aaPredicted RBP10.74□□□□□ -0.69
LSM3P5-201ENST00000566307 PUS3Q9BZE2 481 aaKnown RBP10.74□□□□□ -0.69
LSM3P5-201ENST00000566307 DIAPH3Q9NSV4 1193 aa10.74□□□□□ -0.69
LSM3P5-201ENST00000566307 ZPR1O75312 459 aa10.73□□□□□ -0.69
LSM3P5-201ENST00000566307 SSFA2P28290 1259 aa10.73□□□□□ -0.69
LSM3P5-201ENST00000566307 HSPA4P34932 840 aa10.73□□□□□ -0.69
LSM3P5-201ENST00000566307 LDHAL6AQ6ZMR3 332 aa10.73□□□□□ -0.69
LSM3P5-201ENST00000566307 HSCBQ8IWL3 235 aa10.73□□□□□ -0.69
LSM3P5-201ENST00000566307 SYNE4Q8N205 404 aa10.73□□□□□ -0.69
LSM3P5-201ENST00000566307 ARHGEF1Q92888 912 aaKnown RBP10.73□□□□□ -0.69
LSM3P5-201ENST00000566307 KCNB2Q92953 911 aa10.73□□□□□ -0.69
LSM3P5-201ENST00000566307 MED23Q9ULK4 1368 aa10.73□□□□□ -0.69
LSM3P5-201ENST00000566307 GABBR2O75899 941 aa10.72□□□□□ -0.69
LSM3P5-201ENST00000566307 PDE8BO95263 885 aa10.72□□□□□ -0.69
LSM3P5-201ENST00000566307 FGFR2P21802 821 aa10.72□□□□□ -0.69
LSM3P5-201ENST00000566307 LRRFIP1Q32MZ4 808 aaKnown RBP10.72□□□□□ -0.69
LSM3P5-201ENST00000566307 CCDC158Q5M9N0 1113 aa10.72□□□□□ -0.69
LSM3P5-201ENST00000566307 TRAPPC3LQ5T215 181 aa10.72□□□□□ -0.69
LSM3P5-201ENST00000566307 FAM182BQ5T319 152 aa10.72□□□□□ -0.69
LSM3P5-201ENST00000566307 USPL1Q5W0Q7 1092 aa10.72□□□□□ -0.69
LSM3P5-201ENST00000566307 KBTBD3Q8NAB2 608 aa10.72□□□□□ -0.69
LSM3P5-201ENST00000566307 CDC5LQ99459 802 aaKnown RBP10.72□□□□□ -0.69
LSM3P5-201ENST00000566307 LSG1Q9H089 658 aaKnown RBP10.72□□□□□ -0.69
LSM3P5-201ENST00000566307 BCL11AQ9H165 835 aa10.72□□□□□ -0.69
LSM3P5-201ENST00000566307 BOLA2Q9H3K6 86 aa10.72□□□□□ -0.69
LSM3P5-201ENST00000566307 LRRC4BQ9NT99 713 aa10.72□□□□□ -0.69
LSM3P5-201ENST00000566307 MCM2P49736 904 aa10.71□□□□□ -0.69
LSM3P5-201ENST00000566307 ATP2B3Q16720 1220 aa10.71□□□□□ -0.69
LSM3P5-201ENST00000566307 METTL24Q5JXM2 366 aa10.71□□□□□ -0.69
LSM3P5-201ENST00000566307 TBC1D9BQ66K14 1250 aa10.71□□□□□ -0.69
LSM3P5-201ENST00000566307 TPTE2Q6XPS3 522 aa10.71□□□□□ -0.69
LSM3P5-201ENST00000566307 KIAA1211Q6ZU35 1233 aa10.71□□□□□ -0.69
LSM3P5-201ENST00000566307 CARMIL3Q8ND23 1372 aa10.71□□□□□ -0.69
LSM3P5-201ENST00000566307 LPIN2Q92539 896 aa10.71□□□□□ -0.69
LSM3P5-201ENST00000566307 XAGE2Q96GT9 111 aa10.71□□□□□ -0.69
LSM3P5-201ENST00000566307 SETDB2Q96T68 719 aa10.71□□□□□ -0.69
LSM3P5-201ENST00000566307 FSD1Q9BTV5 496 aa10.71□□□□□ -0.69
LSM3P5-201ENST00000566307 ANO2Q9NQ90 1003 aa10.71□□□□□ -0.69
LSM3P5-201ENST00000566307 CNNM1Q9NRU3 951 aa10.71□□□□□ -0.69
LSM3P5-201ENST00000566307 UQCRFS1P1P0C7P4 283 aa10.7□□□□□ -0.7
LSM3P5-201ENST00000566307 HCLS1P14317 486 aaPredicted RBP10.7□□□□□ -0.7
LSM3P5-201ENST00000566307 RXRBP28702 533 aa10.7□□□□□ -0.7
LSM3P5-201ENST00000566307 IGHMBP2P38935 993 aaKnown RBP10.7□□□□□ -0.7
LSM3P5-201ENST00000566307 TIMM10P62072 90 aa10.7□□□□□ -0.7
LSM3P5-201ENST00000566307 PUM3Q15397 648 aaKnown RBP10.7□□□□□ -0.7
LSM3P5-201ENST00000566307 NEUROD6Q96NK8 337 aa10.7□□□□□ -0.7
LSM3P5-201ENST00000566307 IL25Q9H293 177 aa10.7□□□□□ -0.7
LSM3P5-201ENST00000566307 PAG1Q9NWQ8 432 aa10.7□□□□□ -0.7
LSM3P5-201ENST00000566307 CASZ1Q86V15 1759 aa10.7□□□□□ -0.7
LSM3P5-201ENST00000566307 CCDC171Q6TFL3 1326 aa10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 K7ELQ4 463 aaPredicted RBP10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 ST18O60284 1047 aa10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 MAP4K4O95819 1239 aaPredicted RBP10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 ZFYP08048 801 aaPredicted RBP10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 IFIT1P09914 478 aaKnown RBP10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 ARID4AP29374 1257 aaPredicted RBP10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 RFC4P35249 363 aa10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 KCNQ4P56696 695 aa10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 NMIQ13287 307 aaPredicted RBP10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 ERFEQ4G0M1 354 aa10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 CWC27Q6UX04 472 aaKnown RBP10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 HS6ST3Q8IZP7 471 aa10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 MAP4K1Q92918 833 aa10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 MPHOSPH8Q99549 860 aa10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 TM6SF1Q9BZW5 370 aa10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 ANTXR1Q9H6X2 564 aa10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 HELLSQ9NRZ9 838 aa10.69□□□□□ -0.7
LSM3P5-201ENST00000566307 BSDC1Q9NW68 430 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms