RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	SPRYD3	Q8NCJ5	442 aa		12.36	□□□□□ -0.43
TCF4-231	ENST00000566279	RILPL2	Q969X0	211 aa		12.36	□□□□□ -0.43
TCF4-231	ENST00000566279	ESYT1	Q9BSJ8	1104 aa		12.36	□□□□□ -0.43
TCF4-231	ENST00000566279	BRCA1	P38398	1863 aa	Known RBP	12.36	□□□□□ -0.43
TCF4-231	ENST00000566279	DLEC1	Q9Y238	1755 aa		12.36	□□□□□ -0.43
TCF4-231	ENST00000566279	KCNA3	P22001	575 aa		12.35	□□□□□ -0.43
TCF4-231	ENST00000566279	CASP7	P55210	303 aa		12.35	□□□□□ -0.43
TCF4-231	ENST00000566279	C2CD5	Q86YS7	1000 aa		12.35	□□□□□ -0.43
TCF4-231	ENST00000566279	BRIP1	Q9BX63	1249 aa		12.35	□□□□□ -0.43
TCF4-231	ENST00000566279	TTC41P	Q6P2S7	1318 aa		12.35	□□□□□ -0.43
TCF4-231	ENST00000566279	PCCA	P05165	728 aa	Predicted RBP	12.35	□□□□□ -0.43
TCF4-231	ENST00000566279	RABEP1	Q15276	862 aa		12.35	□□□□□ -0.43
TCF4-231	ENST00000566279	CLASRP	Q8N2M8	674 aa	Known RBP	12.35	□□□□□ -0.43
TCF4-231	ENST00000566279	CD2AP	Q9Y5K6	639 aa		12.35	□□□□□ -0.43
TCF4-231	ENST00000566279	MYH3	P11055	1940 aa		12.34	□□□□□ -0.43
TCF4-231	ENST00000566279		H7C1W4	665 aa		12.34	□□□□□ -0.43
TCF4-231	ENST00000566279	FRAT2	O75474	233 aa	Predicted RBP	12.34	□□□□□ -0.43
TCF4-231	ENST00000566279	SASH1	O94885	1247 aa		12.34	□□□□□ -0.43
TCF4-231	ENST00000566279	RABL6	Q3YEC7	729 aa	Predicted RBP	12.34	□□□□□ -0.43
TCF4-231	ENST00000566279	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.34	□□□□□ -0.43	2e-6	■■■□□ 17.7
TCF4-231	ENST00000566279	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	12.34	□□□□□ -0.43
TCF4-231	ENST00000566279	SPEF2	Q9C093	1822 aa		12.33	□□□□□ -0.44
TCF4-231	ENST00000566279	MAP4K4	O95819	1239 aa	Predicted RBP	12.33	□□□□□ -0.44
TCF4-231	ENST00000566279	SRGN	P10124	158 aa		12.33	□□□□□ -0.44
TCF4-231	ENST00000566279	DDIT3	P35638	169 aa		12.33	□□□□□ -0.44
TCF4-231	ENST00000566279	PDE6B	P35913	854 aa		12.33	□□□□□ -0.44
TCF4-231	ENST00000566279	RFX5	P48382	616 aa	Predicted RBP	12.33	□□□□□ -0.44
TCF4-231	ENST00000566279	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.33	□□□□□ -0.44
TCF4-231	ENST00000566279	KLHDC4	Q8TBB5	520 aa		12.33	□□□□□ -0.44
TCF4-231	ENST00000566279	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.33	□□□□□ -0.44
TCF4-231	ENST00000566279		K7ELQ4	463 aa	Predicted RBP	12.32	□□□□□ -0.44
TCF4-231	ENST00000566279	GLRX3	O76003	335 aa	Known RBP	12.32	□□□□□ -0.44
TCF4-231	ENST00000566279	AACS	Q86V21	672 aa		12.32	□□□□□ -0.44
TCF4-231	ENST00000566279	NLRP3	Q96P20	1036 aa		12.32	□□□□□ -0.44
TCF4-231	ENST00000566279	ECHDC1	Q9NTX5	307 aa		12.32	□□□□□ -0.44
TCF4-231	ENST00000566279	SLX4	Q8IY92	1834 aa		12.32	□□□□□ -0.44
TCF4-231	ENST00000566279		H0YIN7	160 aa		12.32	□□□□□ -0.44
TCF4-231	ENST00000566279	IFIT2	P09913	472 aa	Known RBP	12.32	□□□□□ -0.44
TCF4-231	ENST00000566279	TGFB2	P61812	414 aa		12.32	□□□□□ -0.44
TCF4-231	ENST00000566279	SLC10A5	Q5PT55	438 aa		12.32	□□□□□ -0.44
TCF4-231	ENST00000566279	OLFM4	Q6UX06	510 aa		12.32	□□□□□ -0.44
TCF4-231	ENST00000566279	SIL1	Q9H173	461 aa		12.32	□□□□□ -0.44
TCF4-231	ENST00000566279	COPRS	Q9NQ92	184 aa		12.32	□□□□□ -0.44
TCF4-231	ENST00000566279	CDHR2	Q9BYE9	1310 aa		12.32	□□□□□ -0.44
TCF4-231	ENST00000566279	CNTROB	Q8N137	903 aa		12.31	□□□□□ -0.44
TCF4-231	ENST00000566279	EAF2	Q96CJ1	260 aa	Predicted RBP	12.31	□□□□□ -0.44
TCF4-231	ENST00000566279	IL25	Q9H293	177 aa		12.31	□□□□□ -0.44
TCF4-231	ENST00000566279	SEC31B	Q9NQW1	1179 aa		12.31	□□□□□ -0.44
TCF4-231	ENST00000566279	CHMP5	Q9NZZ3	219 aa		12.31	□□□□□ -0.44
TCF4-231	ENST00000566279	PDE8A	O60658	829 aa		12.31	□□□□□ -0.44
TCF4-231	ENST00000566279	CTSW	P56202	376 aa		12.31	□□□□□ -0.44
TCF4-231	ENST00000566279	FOXO4	P98177	505 aa		12.31	□□□□□ -0.44
TCF4-231	ENST00000566279	PTPN12	Q05209	780 aa	Known RBP	12.31	□□□□□ -0.44
TCF4-231	ENST00000566279	CRY2	Q49AN0	593 aa		12.31	□□□□□ -0.44
TCF4-231	ENST00000566279	RPGR	Q92834	1020 aa	Known RBP	12.31	□□□□□ -0.44
TCF4-231	ENST00000566279	GPATCH3	Q96I76	525 aa		12.31	□□□□□ -0.44
TCF4-231	ENST00000566279	BCS1L	Q9Y276	419 aa		12.31	□□□□□ -0.44
TCF4-231	ENST00000566279	CHMP3	Q9Y3E7	222 aa		12.31	□□□□□ -0.44
TCF4-231	ENST00000566279	RIC1	Q4ADV7	1423 aa		12.3	□□□□□ -0.44
TCF4-231	ENST00000566279	KLRG2	A4D1S0	409 aa	Predicted RBP	12.3	□□□□□ -0.44
TCF4-231	ENST00000566279	YBX3	P16989	372 aa	Known RBP eCLIP	12.3	□□□□□ -0.44
TCF4-231	ENST00000566279	GREM2	Q9H772	168 aa		12.3	□□□□□ -0.44
TCF4-231	ENST00000566279	ANO2	Q9NQ90	1003 aa		12.3	□□□□□ -0.44
TCF4-231	ENST00000566279	TTLL11	Q8NHH1	800 aa		12.29	□□□□□ -0.44
TCF4-231	ENST00000566279	CELF1	Q92879	486 aa	Known RBP	12.29	□□□□□ -0.44
TCF4-231	ENST00000566279	MASTL	Q96GX5	879 aa		12.29	□□□□□ -0.44
TCF4-231	ENST00000566279	TLR7	Q9NYK1	1049 aa	Known RBP	12.29	□□□□□ -0.44
TCF4-231	ENST00000566279	DEK	P35659	375 aa	Known RBP	12.29	□□□□□ -0.44
TCF4-231	ENST00000566279	PRPF40B	Q6NWY9	871 aa	Known RBP	12.29	□□□□□ -0.44
TCF4-231	ENST00000566279	LMBR1L	Q6UX01	489 aa		12.29	□□□□□ -0.44
TCF4-231	ENST00000566279	CCDC8	Q9H0W5	538 aa	Predicted RBP	12.29	□□□□□ -0.44
TCF4-231	ENST00000566279	PIM2	Q9P1W9	311 aa		12.29	□□□□□ -0.44
TCF4-231	ENST00000566279	SGSM2	O43147	1006 aa		12.28	□□□□□ -0.44
TCF4-231	ENST00000566279	EPB41L2	O43491	1005 aa	Known RBP	12.28	□□□□□ -0.44
TCF4-231	ENST00000566279	NPR1	P16066	1061 aa		12.28	□□□□□ -0.44
TCF4-231	ENST00000566279	IL17RA	Q96F46	866 aa		12.28	□□□□□ -0.44
TCF4-231	ENST00000566279	PALD1	Q9ULE6	856 aa		12.28	□□□□□ -0.44
TCF4-231	ENST00000566279	MCC	P23508	829 aa		12.28	□□□□□ -0.44
TCF4-231	ENST00000566279	SF3B3	Q15393	1217 aa	Known RBP	12.28	□□□□□ -0.44
TCF4-231	ENST00000566279	C21orf2	O43822	256 aa		12.27	□□□□□ -0.45
TCF4-231	ENST00000566279	ANAPC15	P60006	121 aa		12.27	□□□□□ -0.45
TCF4-231	ENST00000566279	STYK1	Q6J9G0	422 aa		12.27	□□□□□ -0.45
TCF4-231	ENST00000566279	DDX46	Q7L014	1031 aa	Known RBP	12.27	□□□□□ -0.45
TCF4-231	ENST00000566279	TTLL6	Q8N841	843 aa		12.27	□□□□□ -0.45
TCF4-231	ENST00000566279	ZNF594	Q96JF6	807 aa	Predicted RBP	12.27	□□□□□ -0.45
TCF4-231	ENST00000566279	PLA2G12B	Q9BX93	195 aa		12.27	□□□□□ -0.45
TCF4-231	ENST00000566279	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.27	□□□□□ -0.45
TCF4-231	ENST00000566279	ARFGEF1	Q9Y6D6	1849 aa		12.27	□□□□□ -0.45
TCF4-231	ENST00000566279	ST18	O60284	1047 aa		12.26	□□□□□ -0.45
TCF4-231	ENST00000566279	ITGA6	P23229	1130 aa		12.26	□□□□□ -0.45
TCF4-231	ENST00000566279	GPR162	Q16538	588 aa		12.26	□□□□□ -0.45
TCF4-231	ENST00000566279	CCDC152	Q4G0S7	254 aa		12.26	□□□□□ -0.45
TCF4-231	ENST00000566279	DALRD3	Q5D0E6	543 aa	Known RBP	12.26	□□□□□ -0.45
TCF4-231	ENST00000566279	EVI5L	Q96CN4	794 aa		12.26	□□□□□ -0.45
TCF4-231	ENST00000566279	RBM17	Q96I25	401 aa	Known RBP	12.26	□□□□□ -0.45
TCF4-231	ENST00000566279	CSF1R	P07333	972 aa		12.26	□□□□□ -0.45
TCF4-231	ENST00000566279	HOXA10	P31260	410 aa	Predicted RBP	12.26	□□□□□ -0.45
TCF4-231	ENST00000566279	TFCP2	Q12800	502 aa		12.26	□□□□□ -0.45
TCF4-231	ENST00000566279	TNNI3K	Q59H18	835 aa		12.26	□□□□□ -0.45
TCF4-231	ENST00000566279	LSG1	Q9H089	658 aa	Known RBP	12.26	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms