RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 DPP8Q6V1X1 898 aaPredicted RBP12.6□□□□□ -0.39
CNOT1-208ENST00000565697 SPNS2Q8IVW8 549 aa12.6□□□□□ -0.39
CNOT1-208ENST00000565697 MPNDQ8N594 471 aa12.6□□□□□ -0.39
CNOT1-208ENST00000565697 RBM46Q8TBY0 533 aaKnown RBP12.6□□□□□ -0.39
CNOT1-208ENST00000565697 SNED1Q8TER0 1413 aa12.6□□□□□ -0.39
CNOT1-208ENST00000565697 CT47B1P0C2W7 299 aaPredicted RBP12.59□□□□□ -0.39
CNOT1-208ENST00000565697 EIF6P56537 245 aaKnown RBP12.59□□□□□ -0.39
CNOT1-208ENST00000565697 RPS8P62241 208 aaKnown RBP12.59□□□□□ -0.39
CNOT1-208ENST00000565697 GCKRQ14397 625 aa12.59□□□□□ -0.39
CNOT1-208ENST00000565697 CWF19L2Q2TBE0 894 aaKnown RBP12.59□□□□□ -0.39
CNOT1-208ENST00000565697 MIER1Q8N108 512 aa12.59□□□□□ -0.39
CNOT1-208ENST00000565697 LARGE2Q8N3Y3 721 aa12.59□□□□□ -0.39
CNOT1-208ENST00000565697 RTFDC1Q9BY42 306 aaPredicted RBP12.59□□□□□ -0.39
CNOT1-208ENST00000565697 IQCA1LA6NCM1 817 aa12.58□□□□□ -0.4
CNOT1-208ENST00000565697 H7C1W4 665 aa12.58□□□□□ -0.4
CNOT1-208ENST00000565697 FZD9O00144 591 aa12.58□□□□□ -0.4
CNOT1-208ENST00000565697 PPIP5K2O43314 1243 aa12.58□□□□□ -0.4
CNOT1-208ENST00000565697 NIM1KQ8IY84 436 aa12.58□□□□□ -0.4
CNOT1-208ENST00000565697 CELF1Q92879 486 aaKnown RBP12.58□□□□□ -0.4
CNOT1-208ENST00000565697 WDR90Q96KV7 1748 aa12.58□□□□□ -0.4
CNOT1-208ENST00000565697 CDC5LQ99459 802 aaKnown RBP12.58□□□□□ -0.4
CNOT1-208ENST00000565697 DDNO94850 711 aaPredicted RBP12.57□□□□□ -0.4
CNOT1-208ENST00000565697 CTSWP56202 376 aa12.57□□□□□ -0.4
CNOT1-208ENST00000565697 FSTL1Q12841 308 aa12.57□□□□□ -0.4
CNOT1-208ENST00000565697 ALDH1L2Q3SY69 923 aa12.57□□□□□ -0.4
CNOT1-208ENST00000565697 ANKRD18AQ8IVF6 992 aa12.57□□□□□ -0.4
CNOT1-208ENST00000565697 JARID2Q92833 1246 aaPredicted RBP12.57□□□□□ -0.4
CNOT1-208ENST00000565697 L3MBTL3Q96JM7 780 aaPredicted RBP12.57□□□□□ -0.4
CNOT1-208ENST00000565697 PLA2G12BQ9BX93 195 aa12.57□□□□□ -0.4
CNOT1-208ENST00000565697 NSFL1CQ9UNZ2 370 aaKnown RBP12.57□□□□□ -0.4
CNOT1-208ENST00000565697 PTPRCP08575 1304 aa12.57□□□□□ -0.4
CNOT1-208ENST00000565697 BEND3Q5T5X7 828 aa12.56□□□□□ -0.4
CNOT1-208ENST00000565697 UBE3BQ7Z3V4 1068 aa12.56□□□□□ -0.4
CNOT1-208ENST00000565697 TRMT2AQ8IZ69 625 aaKnown RBP12.56□□□□□ -0.4
CNOT1-208ENST00000565697 GPC2Q8N158 579 aa12.56□□□□□ -0.4
CNOT1-208ENST00000565697 MRPL50Q8N5N7 158 aaKnown RBP12.56□□□□□ -0.4
CNOT1-208ENST00000565697 SMC1BQ8NDV3 1235 aa12.56□□□□□ -0.4
CNOT1-208ENST00000565697 CDCA7LQ96GN5 454 aa12.56□□□□□ -0.4
CNOT1-208ENST00000565697 EYA3Q99504 573 aa12.56□□□□□ -0.4
CNOT1-208ENST00000565697 SEC31BQ9NQW1 1179 aa12.56□□□□□ -0.4
CNOT1-208ENST00000565697 TAF1P21675 1872 aa12.55□□□□□ -0.4
CNOT1-208ENST00000565697 F6X3S4 739 aa12.55□□□□□ -0.4
CNOT1-208ENST00000565697 ALDH1L1O75891 902 aa12.55□□□□□ -0.4
CNOT1-208ENST00000565697 HSPA6P17066 643 aa12.55□□□□□ -0.4
CNOT1-208ENST00000565697 KIAA2012Q0VF49 1180 aa12.55□□□□□ -0.4
CNOT1-208ENST00000565697 AOC3Q16853 763 aa12.55□□□□□ -0.4
CNOT1-208ENST00000565697 SLC4A10Q6U841 1118 aa12.55□□□□□ -0.4
CNOT1-208ENST00000565697 RASEFQ8IZ41 740 aa12.55□□□□□ -0.4
CNOT1-208ENST00000565697 TTLL11Q8NHH1 800 aa12.55□□□□□ -0.4
CNOT1-208ENST00000565697 CCDC85AQ96PX6 553 aaPredicted RBP12.55□□□□□ -0.4
CNOT1-208ENST00000565697 SRCIN1Q9C0H9 1055 aa12.55□□□□□ -0.4
CNOT1-208ENST00000565697 ZNF541Q9H0D2 1346 aa12.55□□□□□ -0.4
CNOT1-208ENST00000565697 RTL9Q8NET4 1388 aa12.55□□□□□ -0.4
CNOT1-208ENST00000565697 MYH3P11055 1940 aa12.54□□□□□ -0.4
CNOT1-208ENST00000565697 LRRC37AA6NMS7 1700 aa12.54□□□□□ -0.4
CNOT1-208ENST00000565697 SCN4AP35499 1836 aa12.54□□□□□ -0.4
CNOT1-208ENST00000565697 POTECB2RU33 542 aa12.54□□□□□ -0.4
CNOT1-208ENST00000565697 C6orf229H3BNL8 230 aa12.54□□□□□ -0.4
CNOT1-208ENST00000565697 WASHC4Q2M389 1173 aa12.54□□□□□ -0.4
CNOT1-208ENST00000565697 PODXL2Q9NZ53 605 aa12.54□□□□□ -0.4
CNOT1-208ENST00000565697 C9orf78Q9NZ63 289 aaPredicted RBP12.54□□□□□ -0.4
CNOT1-208ENST00000565697 ANKIB1Q9P2G1 1089 aa12.54□□□□□ -0.4
CNOT1-208ENST00000565697 ZNRF3Q9ULT6 936 aa12.54□□□□□ -0.4
CNOT1-208ENST00000565697 LMOD1P29536 600 aaPredicted RBP12.53□□□□□ -0.4
CNOT1-208ENST00000565697 IGHMBP2P38935 993 aaKnown RBP12.53□□□□□ -0.4
CNOT1-208ENST00000565697 CASP7P55210 303 aa12.53□□□□□ -0.4
CNOT1-208ENST00000565697 GPSM2P81274 684 aa12.53□□□□□ -0.4
CNOT1-208ENST00000565697 SSH1Q8WYL5 1049 aa12.53□□□□□ -0.4
CNOT1-208ENST00000565697 TMEM121BQ9BXQ6 578 aaPredicted RBP12.53□□□□□ -0.4
CNOT1-208ENST00000565697 GREM2Q9H772 168 aa12.53□□□□□ -0.4
CNOT1-208ENST00000565697 BSDC1Q9NW68 430 aaPredicted RBP12.53□□□□□ -0.4
CNOT1-208ENST00000565697 HACL1Q9UJ83 578 aa12.53□□□□□ -0.4
CNOT1-208ENST00000565697 GJA3Q9Y6H8 435 aa12.53□□□□□ -0.4
CNOT1-208ENST00000565697 GRM8O00222 908 aa12.52□□□□□ -0.41
CNOT1-208ENST00000565697 CSF1RP07333 972 aa12.52□□□□□ -0.41
CNOT1-208ENST00000565697 APLP1P51693 650 aa12.52□□□□□ -0.41
CNOT1-208ENST00000565697 TNIP1Q15025 636 aa12.52□□□□□ -0.41
CNOT1-208ENST00000565697 SLC51AQ86UW1 340 aa12.52□□□□□ -0.41
CNOT1-208ENST00000565697 PNMA8AQ86V59 439 aaPredicted RBP12.52□□□□□ -0.41
CNOT1-208ENST00000565697 TBC1D16Q8TBP0 767 aa12.52□□□□□ -0.41
CNOT1-208ENST00000565697 MPHOSPH8Q99549 860 aa12.52□□□□□ -0.41
CNOT1-208ENST00000565697 SMC4Q9NTJ3 1288 aa12.52□□□□□ -0.41
CNOT1-208ENST00000565697 GGA1Q9UJY5 639 aa12.52□□□□□ -0.41
CNOT1-208ENST00000565697 ANKRD18BA2A2Z9 1011 aa12.51□□□□□ -0.41
CNOT1-208ENST00000565697 ITGA6P23229 1130 aa12.51□□□□□ -0.41
CNOT1-208ENST00000565697 ATP2B4P23634 1241 aa12.51□□□□□ -0.41
CNOT1-208ENST00000565697 CIAPIN1Q6FI81 312 aa12.51□□□□□ -0.41
CNOT1-208ENST00000565697 ZC3H12CQ9C0D7 883 aaKnown RBP12.51□□□□□ -0.41
CNOT1-208ENST00000565697 TAF1DQ9H5J8 278 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-208ENST00000565697 POLLQ9UGP5 575 aa12.51□□□□□ -0.41
CNOT1-208ENST00000565697 PCDHB13Q9Y5F0 798 aa12.51□□□□□ -0.41
CNOT1-208ENST00000565697 XDHP47989 1333 aa12.51□□□□□ -0.41
CNOT1-208ENST00000565697 G3V3G9 751 aa12.5□□□□□ -0.41
CNOT1-208ENST00000565697 RIMBP2O15034 1052 aa12.5□□□□□ -0.41
CNOT1-208ENST00000565697 UFL1O94874 794 aa12.5□□□□□ -0.41
CNOT1-208ENST00000565697 PLCG2P16885 1265 aa12.5□□□□□ -0.41
CNOT1-208ENST00000565697 EPHX2P34913 555 aa12.5□□□□□ -0.41
CNOT1-208ENST00000565697 BRPF1P55201 1214 aaPredicted RBP12.5□□□□□ -0.41
CNOT1-208ENST00000565697 HNRNPUQ00839 825 aaKnown RBP eCLIP12.5□□□□□ -0.41
CNOT1-208ENST00000565697 IFIT5Q13325 482 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms