RNA–Protein interactions for RNA: ENST00000565684.5

KIFC3-223, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-223	ENST00000565684	PLA2G12B	Q9BX93	195 aa		28.89	■■■□□ 2.22
KIFC3-223	ENST00000565684	CREBZF	Q9NS37	354 aa		28.88	■■■□□ 2.21
KIFC3-223	ENST00000565684	UFL1	O94874	794 aa		28.87	■■■□□ 2.21
KIFC3-223	ENST00000565684	TNIP1	Q15025	636 aa		28.87	■■■□□ 2.21
KIFC3-223	ENST00000565684	BEND3	Q5T5X7	828 aa		28.87	■■■□□ 2.21
KIFC3-223	ENST00000565684	USP50	Q70EL3	339 aa	Predicted RBP	28.87	■■■□□ 2.21
KIFC3-223	ENST00000565684	CDC5L	Q99459	802 aa	Known RBP	28.87	■■■□□ 2.21
KIFC3-223	ENST00000565684	EYA3	Q99504	573 aa		28.87	■■■□□ 2.21
KIFC3-223	ENST00000565684	ZNF646	O15015	1829 aa	Predicted RBP	28.87	■■■□□ 2.21
KIFC3-223	ENST00000565684	CNTROB	Q8N137	903 aa		28.86	■■■□□ 2.21
KIFC3-223	ENST00000565684	ADARB2	Q9NS39	739 aa	Known RBP	28.86	■■■□□ 2.21
KIFC3-223	ENST00000565684	ANKIB1	Q9P2G1	1089 aa		28.86	■■■□□ 2.21
KIFC3-223	ENST00000565684	TRPM7	Q96QT4	1865 aa		28.86	■■■□□ 2.21
KIFC3-223	ENST00000565684	CCER2	I3L3R5	266 aa		28.85	■■■□□ 2.21
KIFC3-223	ENST00000565684	ECE2	O60344	883 aa		28.85	■■■□□ 2.21
KIFC3-223	ENST00000565684	DOK7	Q18PE1	504 aa		28.85	■■■□□ 2.21
KIFC3-223	ENST00000565684	KCNQ5	Q9NR82	932 aa		28.85	■■■□□ 2.21
KIFC3-223	ENST00000565684	GGA1	Q9UJY5	639 aa		28.85	■■■□□ 2.21
KIFC3-223	ENST00000565684	CSF1R	P07333	972 aa		28.84	■■■□□ 2.21
KIFC3-223	ENST00000565684	XDH	P47989	1333 aa		28.84	■■■□□ 2.21
KIFC3-223	ENST00000565684	SHTN1	A0MZ66	631 aa		28.83	■■■□□ 2.21
KIFC3-223	ENST00000565684		E9PSI1	815 aa		28.83	■■■□□ 2.21
KIFC3-223	ENST00000565684	PSMD14	O00487	310 aa		28.83	■■■□□ 2.21
KIFC3-223	ENST00000565684	SLFN5	Q08AF3	891 aa		28.83	■■■□□ 2.21
KIFC3-223	ENST00000565684	FAM161A	Q3B820	660 aa		28.83	■■■□□ 2.21
KIFC3-223	ENST00000565684	BSDC1	Q9NW68	430 aa	Predicted RBP	28.83	■■■□□ 2.21
KIFC3-223	ENST00000565684	WTIP	A6NIX2	430 aa	Predicted RBP	28.82	■■■□□ 2.2
KIFC3-223	ENST00000565684	BCL2L13	Q9BXK5	485 aa		28.82	■■■□□ 2.2
KIFC3-223	ENST00000565684	ZC3H12C	Q9C0D7	883 aa	Known RBP	28.82	■■■□□ 2.2
KIFC3-223	ENST00000565684	MINPP1	Q9UNW1	487 aa		28.82	■■■□□ 2.2
KIFC3-223	ENST00000565684	ZBTB12	Q9Y330	459 aa	Predicted RBP	28.82	■■■□□ 2.2
KIFC3-223	ENST00000565684	ITGA6	P23229	1130 aa		28.8	■■■□□ 2.2
KIFC3-223	ENST00000565684	CDCA7L	Q96GN5	454 aa		28.8	■■■□□ 2.2
KIFC3-223	ENST00000565684	TMEM88B	A6NKF7	163 aa		28.79	■■■□□ 2.2
KIFC3-223	ENST00000565684	HIRA	P54198	1017 aa	Predicted RBP	28.79	■■■□□ 2.2
KIFC3-223	ENST00000565684	FOXO4	P98177	505 aa		28.79	■■■□□ 2.2
KIFC3-223	ENST00000565684	FMR1	Q06787	632 aa	Known RBP eCLIP	28.79	■■■□□ 2.2	1e-6	■■■■□ 23.7
KIFC3-223	ENST00000565684	MRPL50	Q8N5N7	158 aa	Known RBP	28.79	■■■□□ 2.2
KIFC3-223	ENST00000565684	TRPM4	Q8TD43	1214 aa		28.79	■■■□□ 2.2
KIFC3-223	ENST00000565684	CNOT7	Q9UIV1	285 aa	Known RBP	28.79	■■■□□ 2.2
KIFC3-223	ENST00000565684	ATP2B4	P23634	1241 aa		28.78	■■■□□ 2.2
KIFC3-223	ENST00000565684	MKRN1	Q9UHC7	482 aa	Known RBP	28.78	■■■□□ 2.2
KIFC3-223	ENST00000565684	CNTNAP1	P78357	1384 aa		28.77	■■■□□ 2.2
KIFC3-223	ENST00000565684	MICALL2	Q8IY33	904 aa		28.77	■■■□□ 2.2
KIFC3-223	ENST00000565684	DPF2	Q92785	391 aa		28.77	■■■□□ 2.2
KIFC3-223	ENST00000565684	MED23	Q9ULK4	1368 aa		28.76	■■■□□ 2.2
KIFC3-223	ENST00000565684	EPHA10	Q5JZY3	1008 aa		28.76	■■■□□ 2.19
KIFC3-223	ENST00000565684	TRMT2A	Q8IZ69	625 aa	Known RBP	28.76	■■■□□ 2.19
KIFC3-223	ENST00000565684	PGAP2	Q9UHJ9	254 aa		28.76	■■■□□ 2.19
KIFC3-223	ENST00000565684	ZNF609	O15014	1411 aa		28.76	■■■□□ 2.19
KIFC3-223	ENST00000565684	GRM8	O00222	908 aa		28.75	■■■□□ 2.19
KIFC3-223	ENST00000565684	TRAF5	O00463	557 aa		28.75	■■■□□ 2.19
KIFC3-223	ENST00000565684	IGHMBP2	P38935	993 aa	Known RBP	28.75	■■■□□ 2.19
KIFC3-223	ENST00000565684	SLC4A10	Q6U841	1118 aa		28.75	■■■□□ 2.19
KIFC3-223	ENST00000565684	ALDH1L1	O75891	902 aa		28.74	■■■□□ 2.19
KIFC3-223	ENST00000565684	VIL1	P09327	827 aa	Known RBP	28.74	■■■□□ 2.19
KIFC3-223	ENST00000565684	CCT4	P50991	539 aa	Known RBP	28.74	■■■□□ 2.19
KIFC3-223	ENST00000565684	SSH1	Q8WYL5	1049 aa		28.74	■■■□□ 2.19
KIFC3-223	ENST00000565684	EGFR	P00533	1210 aa		28.73	■■■□□ 2.19
KIFC3-223	ENST00000565684	RPS12	P25398	132 aa	Known RBP	28.73	■■■□□ 2.19
KIFC3-223	ENST00000565684	SRCIN1	Q9C0H9	1055 aa		28.73	■■■□□ 2.19
KIFC3-223	ENST00000565684	POLR2A	P24928	1970 aa	Known RBP	28.73	■■■□□ 2.19
KIFC3-223	ENST00000565684		H7C1D1	291 aa		28.72	■■■□□ 2.19
KIFC3-223	ENST00000565684	ANKRD18B	A2A2Z9	1011 aa		28.71	■■■□□ 2.19
KIFC3-223	ENST00000565684		G3V3G9	751 aa		28.71	■■■□□ 2.19
KIFC3-223	ENST00000565684	DCAF8	Q5TAQ9	597 aa		28.71	■■■□□ 2.19
KIFC3-223	ENST00000565684	SAMD7	Q7Z3H4	446 aa		28.71	■■■□□ 2.19
KIFC3-223	ENST00000565684	ZC3H15	Q8WU90	426 aa	Known RBP	28.71	■■■□□ 2.19
KIFC3-223	ENST00000565684	LMBR1L	Q6UX01	489 aa		28.7	■■■□□ 2.18
KIFC3-223	ENST00000565684	TXNRD3	Q86VQ6	643 aa		28.7	■■■□□ 2.18
KIFC3-223	ENST00000565684	MPHOSPH8	Q99549	860 aa		28.7	■■■□□ 2.18
KIFC3-223	ENST00000565684	PTPRC	P08575	1304 aa		28.69	■■■□□ 2.18
KIFC3-223	ENST00000565684	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	28.69	■■■□□ 2.18
KIFC3-223	ENST00000565684	CST9	Q5W186	159 aa		28.69	■■■□□ 2.18
KIFC3-223	ENST00000565684	KAZALD1	Q96I82	304 aa		28.69	■■■□□ 2.18
KIFC3-223	ENST00000565684	GLIS2	Q9BZE0	524 aa	Predicted RBP	28.69	■■■□□ 2.18
KIFC3-223	ENST00000565684	C9orf78	Q9NZ63	289 aa	Predicted RBP	28.69	■■■□□ 2.18
KIFC3-223	ENST00000565684	LEMD3	Q9Y2U8	911 aa		28.69	■■■□□ 2.18
KIFC3-223	ENST00000565684	THSD7B	Q9C0I4	1608 aa		28.69	■■■□□ 2.18
KIFC3-223	ENST00000565684	RASSF10	A6NK89	507 aa		28.68	■■■□□ 2.18
KIFC3-223	ENST00000565684	KLRK1	P26718	216 aa		28.68	■■■□□ 2.18
KIFC3-223	ENST00000565684	CHRND	Q07001	517 aa		28.68	■■■□□ 2.18
KIFC3-223	ENST00000565684	IFIT5	Q13325	482 aa	Known RBP	28.68	■■■□□ 2.18
KIFC3-223	ENST00000565684	RSBN1L	Q6PCB5	846 aa	Predicted RBP	28.68	■■■□□ 2.18
KIFC3-223	ENST00000565684	PODN	Q7Z5L7	613 aa		28.68	■■■□□ 2.18
KIFC3-223	ENST00000565684	ANKRD2	Q9GZV1	360 aa		28.68	■■■□□ 2.18
KIFC3-223	ENST00000565684	ZNF804B	A4D1E1	1349 aa		28.68	■■■□□ 2.18
KIFC3-223	ENST00000565684	UTY	O14607	1347 aa		28.68	■■■□□ 2.18
KIFC3-223	ENST00000565684	NBPF7	P0C2Y1	421 aa	Predicted RBP	28.67	■■■□□ 2.18
KIFC3-223	ENST00000565684	SUCLG2	Q96I99	432 aa		28.67	■■■□□ 2.18
KIFC3-223	ENST00000565684	GML	Q99445	158 aa		28.67	■■■□□ 2.18
KIFC3-223	ENST00000565684	CHMP3	Q9Y3E7	222 aa		28.67	■■■□□ 2.18
KIFC3-223	ENST00000565684	HSPA1A	P0DMV8	641 aa	Known RBP	28.66	■■■□□ 2.18
KIFC3-223	ENST00000565684	HSPA1B	P0DMV9	641 aa	Known RBP	28.66	■■■□□ 2.18
KIFC3-223	ENST00000565684	VEGFB	P49765	207 aa		28.66	■■■□□ 2.18
KIFC3-223	ENST00000565684	ALDH1L2	Q3SY69	923 aa		28.66	■■■□□ 2.18
KIFC3-223	ENST00000565684	IRS2	Q9Y4H2	1338 aa		28.66	■■■□□ 2.18
KIFC3-223	ENST00000565684	USP17L3	A6NCW0	530 aa		28.64	■■■□□ 2.18
KIFC3-223	ENST00000565684	USP17L4	A6NCW7	530 aa		28.64	■■■□□ 2.18
KIFC3-223	ENST00000565684	USP17L1	Q7RTZ2	530 aa		28.64	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms