RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 PASKQ96RG2 1323 aa21.22■□□□□ 0.99
USB1-211ENST00000565662 JMYQ8N9B5 988 aa21.21■□□□□ 0.99
USB1-211ENST00000565662 ANKRD2Q9GZV1 360 aa21.21■□□□□ 0.99
USB1-211ENST00000565662 MED23Q9ULK4 1368 aa21.21■□□□□ 0.99
USB1-211ENST00000565662 PSME4Q14997 1843 aa21.2■□□□□ 0.98
USB1-211ENST00000565662 H7C1D1 291 aa21.2■□□□□ 0.98
USB1-211ENST00000565662 ALDH1L2Q3SY69 923 aa21.2■□□□□ 0.98
USB1-211ENST00000565662 BEND3Q5T5X7 828 aa21.2■□□□□ 0.98
USB1-211ENST00000565662 MPHOSPH8Q99549 860 aa21.2■□□□□ 0.98
USB1-211ENST00000565662 POLLQ9UGP5 575 aa21.2■□□□□ 0.98
USB1-211ENST00000565662 ECE2O60344 883 aa21.19■□□□□ 0.98
USB1-211ENST00000565662 CSF1RP07333 972 aa21.19■□□□□ 0.98
USB1-211ENST00000565662 MMP14P50281 582 aa21.19■□□□□ 0.98
USB1-211ENST00000565662 CNTROBQ8N137 903 aa21.19■□□□□ 0.98
USB1-211ENST00000565662 SRCIN1Q9C0H9 1055 aa21.19■□□□□ 0.98
USB1-211ENST00000565662 GREM2Q9H772 168 aa21.19■□□□□ 0.98
USB1-211ENST00000565662 LEMD3Q9Y2U8 911 aa21.19■□□□□ 0.98
USB1-211ENST00000565662 SPEF2Q9C093 1822 aa21.19■□□□□ 0.98
USB1-211ENST00000565662 ANKRD18BA2A2Z9 1011 aa21.18■□□□□ 0.98
USB1-211ENST00000565662 TMEM88BA6NKF7 163 aa21.18■□□□□ 0.98
USB1-211ENST00000565662 GRM8O00222 908 aa21.18■□□□□ 0.98
USB1-211ENST00000565662 POTEIP0CG38 1075 aa21.18■□□□□ 0.98
USB1-211ENST00000565662 POTEJP0CG39 1038 aa21.18■□□□□ 0.98
USB1-211ENST00000565662 ITGA6P23229 1130 aa21.18■□□□□ 0.98
USB1-211ENST00000565662 GMPSP49915 693 aaPredicted RBP21.18■□□□□ 0.98
USB1-211ENST00000565662 SLFN5Q08AF3 891 aa21.18■□□□□ 0.98
USB1-211ENST00000565662 PODNQ7Z5L7 613 aa21.18■□□□□ 0.98
USB1-211ENST00000565662 C9orf78Q9NZ63 289 aaPredicted RBP21.18■□□□□ 0.98
USB1-211ENST00000565662 RAD17O75943 681 aa21.17■□□□□ 0.98
USB1-211ENST00000565662 CASP7P55210 303 aa21.17■□□□□ 0.98
USB1-211ENST00000565662 TRPM7Q96QT4 1865 aa21.16■□□□□ 0.98
USB1-211ENST00000565662 ITGBL1O95965 494 aaPredicted RBP21.16■□□□□ 0.98
USB1-211ENST00000565662 EPS15P42566 896 aa21.16■□□□□ 0.98
USB1-211ENST00000565662 IFIT5Q13325 482 aaKnown RBP21.16■□□□□ 0.98
USB1-211ENST00000565662 CCDC85AQ96PX6 553 aaPredicted RBP21.16■□□□□ 0.98
USB1-211ENST00000565662 DBNDD1Q9H9R9 158 aa21.16■□□□□ 0.98
USB1-211ENST00000565662 COL4A1P02462 1669 aa21.15■□□□□ 0.98
USB1-211ENST00000565662 MYO3BQ8WXR4 1341 aa21.15■□□□□ 0.98
USB1-211ENST00000565662 YDJCA8MPS7 323 aa21.15■□□□□ 0.98
USB1-211ENST00000565662 RIMBP2O15034 1052 aa21.15■□□□□ 0.98
USB1-211ENST00000565662 SLC51AQ86UW1 340 aa21.15■□□□□ 0.98
USB1-211ENST00000565662 AGBL3Q8NEM8 1001 aa21.15■□□□□ 0.98
USB1-211ENST00000565662 JARID2Q92833 1246 aaPredicted RBP21.15■□□□□ 0.98
USB1-211ENST00000565662 MINPP1Q9UNW1 487 aa21.15■□□□□ 0.98
USB1-211ENST00000565662 PSMD14O00487 310 aa21.14■□□□□ 0.97
USB1-211ENST00000565662 CCT4P50991 539 aaKnown RBP21.14■□□□□ 0.97
USB1-211ENST00000565662 FAM161AQ3B820 660 aa21.14■□□□□ 0.97
USB1-211ENST00000565662 CNOT7Q9UIV1 285 aaKnown RBP21.14■□□□□ 0.97
USB1-211ENST00000565662 CNTNAP1P78357 1384 aa21.13■□□□□ 0.97
USB1-211ENST00000565662 F6X3S4 739 aa21.13■□□□□ 0.97
USB1-211ENST00000565662 VIL1P09327 827 aaKnown RBP21.13■□□□□ 0.97
USB1-211ENST00000565662 CCDC57Q2TAC2 916 aa21.13■□□□□ 0.97
USB1-211ENST00000565662 MAP1SQ66K74 1059 aaPredicted RBP21.13■□□□□ 0.97
USB1-211ENST00000565662 SLC4A10Q6U841 1118 aa21.13■□□□□ 0.97
USB1-211ENST00000565662 COA1Q9GZY4 146 aa21.13■□□□□ 0.97
USB1-211ENST00000565662 PGAP2Q9UHJ9 254 aa21.13■□□□□ 0.97
USB1-211ENST00000565662 HDAC5Q9UQL6 1122 aa21.13■□□□□ 0.97
USB1-211ENST00000565662 KCNJ4P48050 445 aa21.12■□□□□ 0.97
USB1-211ENST00000565662 TAF7LQ5H9L4 462 aa21.12■□□□□ 0.97
USB1-211ENST00000565662 MICALL2Q8IY33 904 aa21.12■□□□□ 0.97
USB1-211ENST00000565662 MRPL50Q8N5N7 158 aaKnown RBP21.12■□□□□ 0.97
USB1-211ENST00000565662 UTYO14607 1347 aa21.11■□□□□ 0.97
USB1-211ENST00000565662 BRPF1P55201 1214 aaPredicted RBP21.1■□□□□ 0.97
USB1-211ENST00000565662 DOK7Q18PE1 504 aa21.1■□□□□ 0.97
USB1-211ENST00000565662 CDC37L1Q7L3B6 337 aa21.1■□□□□ 0.97
USB1-211ENST00000565662 TRMT2AQ8IZ69 625 aaKnown RBP21.1■□□□□ 0.97
USB1-211ENST00000565662 CHMP3Q9Y3E7 222 aa21.1■□□□□ 0.97
USB1-211ENST00000565662 ZNF804BA4D1E1 1349 aa21.09■□□□□ 0.97
USB1-211ENST00000565662 KIF16BQ96L93 1317 aa21.09■□□□□ 0.97
USB1-211ENST00000565662 USP17L3A6NCW0 530 aa21.09■□□□□ 0.97
USB1-211ENST00000565662 USP17L4A6NCW7 530 aa21.09■□□□□ 0.97
USB1-211ENST00000565662 HTRA3P83110 453 aa21.09■□□□□ 0.97
USB1-211ENST00000565662 RSBN1LQ6PCB5 846 aaPredicted RBP21.09■□□□□ 0.97
USB1-211ENST00000565662 USP17L1Q7RTZ2 530 aa21.09■□□□□ 0.97
USB1-211ENST00000565662 SMC4Q9NTJ3 1288 aa21.09■□□□□ 0.97
USB1-211ENST00000565662 SCN9AQ15858 1988 aa21.08■□□□□ 0.97
USB1-211ENST00000565662 RASSF10A6NK89 507 aa21.08■□□□□ 0.97
USB1-211ENST00000565662 FOXO4P98177 505 aa21.08■□□□□ 0.97
USB1-211ENST00000565662 C15orf52Q6ZUT6 534 aaKnown RBP21.08■□□□□ 0.97
USB1-211ENST00000565662 SSH1Q8WYL5 1049 aa21.08■□□□□ 0.97
USB1-211ENST00000565662 A0A1B0GUL6 1792 aa21.08■□□□□ 0.96
USB1-211ENST00000565662 ECE1P42892 770 aa21.07■□□□□ 0.96
USB1-211ENST00000565662 CHRNDQ07001 517 aa21.07■□□□□ 0.96
USB1-211ENST00000565662 STRIP1Q5VSL9 837 aa21.07■□□□□ 0.96
USB1-211ENST00000565662 LMBR1LQ6UX01 489 aa21.07■□□□□ 0.96
USB1-211ENST00000565662 DIEXFQ68CQ4 756 aaKnown RBP21.06■□□□□ 0.96
USB1-211ENST00000565662 OGFOD1Q8N543 542 aa21.06■□□□□ 0.96
USB1-211ENST00000565662 DCPSQ96C86 337 aaKnown RBP21.06■□□□□ 0.96
USB1-211ENST00000565662 HHIPL1Q96JK4 782 aa21.06■□□□□ 0.96
USB1-211ENST00000565662 API5Q9BZZ5 524 aaKnown RBP21.06■□□□□ 0.96
USB1-211ENST00000565662 ABT1Q9ULW3 272 aaKnown RBP21.06■□□□□ 0.96
USB1-211ENST00000565662 ZNF280AP59817 542 aaPredicted RBP21.05■□□□□ 0.96
USB1-211ENST00000565662 KIF4BQ2VIQ3 1234 aa21.05■□□□□ 0.96
USB1-211ENST00000565662 DEFB115Q30KQ5 88 aa21.05■□□□□ 0.96
USB1-211ENST00000565662 LDHAL6AQ6ZMR3 332 aa21.05■□□□□ 0.96
USB1-211ENST00000565662 ZNF804AQ7Z570 1209 aa21.05■□□□□ 0.96
USB1-211ENST00000565662 CNNM1Q9NRU3 951 aa21.05■□□□□ 0.96
USB1-211ENST00000565662 ZBTB12Q9Y330 459 aaPredicted RBP21.05■□□□□ 0.96
USB1-211ENST00000565662 PITPNM2Q9BZ72 1349 aa21.04■□□□□ 0.96
USB1-211ENST00000565662 USP17L8P0C7I0 530 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms