RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 TTC41PQ6P2S7 1318 aa11.45□□□□□ -0.58
CNEP1R1-206ENST00000565556 PNPLA7Q6ZV29 1317 aa11.45□□□□□ -0.58
CNEP1R1-206ENST00000565556 TFCP2Q12800 502 aa11.45□□□□□ -0.58
CNEP1R1-206ENST00000565556 CDC5LQ99459 802 aaKnown RBP11.45□□□□□ -0.58
CNEP1R1-206ENST00000565556 ISY1Q9ULR0 285 aaKnown RBP11.45□□□□□ -0.58
CNEP1R1-206ENST00000565556 CASZ1Q86V15 1759 aa11.45□□□□□ -0.58
CNEP1R1-206ENST00000565556 ERC2O15083 957 aa11.44□□□□□ -0.58
CNEP1R1-206ENST00000565556 EIF5BO60841 1220 aaKnown RBP11.44□□□□□ -0.58
CNEP1R1-206ENST00000565556 SERPINB2P05120 415 aa11.44□□□□□ -0.58
CNEP1R1-206ENST00000565556 ST5P78524 1137 aa11.44□□□□□ -0.58
CNEP1R1-206ENST00000565556 LRRC24Q50LG9 513 aa11.44□□□□□ -0.58
CNEP1R1-206ENST00000565556 CNNM1Q9NRU3 951 aa11.44□□□□□ -0.58
CNEP1R1-206ENST00000565556 AKAP2Q9Y2D5 859 aa11.44□□□□□ -0.58
CNEP1R1-206ENST00000565556 ABCC12Q96J65 1359 aa11.44□□□□□ -0.58
CNEP1R1-206ENST00000565556 IGHMBP2P38935 993 aaKnown RBP11.43□□□□□ -0.58
CNEP1R1-206ENST00000565556 TNNI3KQ59H18 835 aa11.43□□□□□ -0.58
CNEP1R1-206ENST00000565556 DEFB132Q7Z7B7 95 aa11.43□□□□□ -0.58
CNEP1R1-206ENST00000565556 EAF2Q96CJ1 260 aaPredicted RBP11.43□□□□□ -0.58
CNEP1R1-206ENST00000565556 MPHOSPH8Q99549 860 aa11.43□□□□□ -0.58
CNEP1R1-206ENST00000565556 PUS3Q9BZE2 481 aaKnown RBP11.43□□□□□ -0.58
CNEP1R1-206ENST00000565556 ECHDC1Q9NTX5 307 aa11.43□□□□□ -0.58
CNEP1R1-206ENST00000565556 RIPOR2Q9Y4F9 1068 aa11.43□□□□□ -0.58
CNEP1R1-206ENST00000565556 FPGT-TNNI3KV9GXZ4 949 aa11.43□□□□□ -0.58
CNEP1R1-206ENST00000565556 LRP5O75197 1615 aa11.43□□□□□ -0.58
CNEP1R1-206ENST00000565556 MROH5Q6ZUA9 1318 aa11.43□□□□□ -0.58
CNEP1R1-206ENST00000565556 POLRMTO00411 1230 aaKnown RBP11.43□□□□□ -0.58
CNEP1R1-206ENST00000565556 GLRX3O76003 335 aaKnown RBP11.43□□□□□ -0.58
CNEP1R1-206ENST00000565556 PRR5LQ6MZQ0 368 aa11.43□□□□□ -0.58
CNEP1R1-206ENST00000565556 RRAGDQ9NQL2 400 aaPredicted RBP11.43□□□□□ -0.58
CNEP1R1-206ENST00000565556 TRAK2O60296 914 aa11.42□□□□□ -0.58
CNEP1R1-206ENST00000565556 XRCC6P12956 609 aaKnown RBP eCLIP11.42□□□□□ -0.58
CNEP1R1-206ENST00000565556 GSPT1P15170 499 aaKnown RBP11.42□□□□□ -0.58
CNEP1R1-206ENST00000565556 MRE11P49959 708 aa11.42□□□□□ -0.58
CNEP1R1-206ENST00000565556 METTL24Q5JXM2 366 aa11.42□□□□□ -0.58
CNEP1R1-206ENST00000565556 ANKRD18AQ8IVF6 992 aa11.42□□□□□ -0.58
CNEP1R1-206ENST00000565556 SNX21Q969T3 373 aa11.42□□□□□ -0.58
CNEP1R1-206ENST00000565556 CIZ1Q9ULV3 898 aaPredicted RBP11.42□□□□□ -0.58
CNEP1R1-206ENST00000565556 PTMSP20962 102 aa11.41□□□□□ -0.58
CNEP1R1-206ENST00000565556 RBM25P49756 843 aaKnown RBP11.41□□□□□ -0.58
CNEP1R1-206ENST00000565556 DDR1Q08345 913 aa11.41□□□□□ -0.58
CNEP1R1-206ENST00000565556 DDX46Q7L014 1031 aaKnown RBP11.41□□□□□ -0.58
CNEP1R1-206ENST00000565556 SPRYD3Q8NCJ5 442 aa11.41□□□□□ -0.58
CNEP1R1-206ENST00000565556 CCDC8Q9H0W5 538 aaPredicted RBP11.41□□□□□ -0.58
CNEP1R1-206ENST00000565556 SEC31BQ9NQW1 1179 aa11.41□□□□□ -0.58
CNEP1R1-206ENST00000565556 PARP3Q9Y6F1 533 aa11.41□□□□□ -0.58
CNEP1R1-206ENST00000565556 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.41□□□□□ -0.58
CNEP1R1-206ENST00000565556 NRXN2Q9P2S2 1712 aa11.41□□□□□ -0.58
CNEP1R1-206ENST00000565556 CASC1Q6TDU7 716 aa11.4□□□□□ -0.58
CNEP1R1-206ENST00000565556 C3orf67Q6ZVT6 689 aa11.4□□□□□ -0.58
CNEP1R1-206ENST00000565556 PI4K2BQ8TCG2 481 aa11.4□□□□□ -0.58
CNEP1R1-206ENST00000565556 BSDC1Q9NW68 430 aaPredicted RBP11.4□□□□□ -0.58
CNEP1R1-206ENST00000565556 SPEF2Q9C093 1822 aa11.4□□□□□ -0.58
CNEP1R1-206ENST00000565556 ZNF609O15014 1411 aa11.4□□□□□ -0.58
CNEP1R1-206ENST00000565556 CDC45O75419 566 aa11.4□□□□□ -0.58
CNEP1R1-206ENST00000565556 PDE8BO95263 885 aa11.4□□□□□ -0.58
CNEP1R1-206ENST00000565556 MMP10P09238 476 aa11.4□□□□□ -0.58
CNEP1R1-206ENST00000565556 SDSP20132 328 aa11.4□□□□□ -0.58
CNEP1R1-206ENST00000565556 RPS8P62241 208 aaKnown RBP11.4□□□□□ -0.58
CNEP1R1-206ENST00000565556 UBE2Q2Q8WVN8 375 aa11.4□□□□□ -0.58
CNEP1R1-206ENST00000565556 NEUROD6Q96NK8 337 aa11.4□□□□□ -0.58
CNEP1R1-206ENST00000565556 TNRC6CQ9HCJ0 1690 aaKnown RBP11.39□□□□□ -0.59
CNEP1R1-206ENST00000565556 AK9Q5TCS8 1911 aa11.39□□□□□ -0.59
CNEP1R1-206ENST00000565556 A0A1B0GUL7 405 aa11.39□□□□□ -0.59
CNEP1R1-206ENST00000565556 TRIM6-TRIM34B2RNG4 842 aa11.39□□□□□ -0.59
CNEP1R1-206ENST00000565556 ATP5JP18859 108 aa11.39□□□□□ -0.59
CNEP1R1-206ENST00000565556 DDIT3P35638 169 aa11.39□□□□□ -0.59
CNEP1R1-206ENST00000565556 ATP2B3Q16720 1220 aa11.39□□□□□ -0.59
CNEP1R1-206ENST00000565556 CRY2Q49AN0 593 aa11.39□□□□□ -0.59
CNEP1R1-206ENST00000565556 TSHZ3Q63HK5 1081 aa11.39□□□□□ -0.59
CNEP1R1-206ENST00000565556 CCDC24Q8N4L8 307 aa11.39□□□□□ -0.59
CNEP1R1-206ENST00000565556 VGLL2Q8N8G2 317 aa11.39□□□□□ -0.59
CNEP1R1-206ENST00000565556 SLC16A10Q8TF71 515 aa11.39□□□□□ -0.59
CNEP1R1-206ENST00000565556 RPGRQ92834 1020 aaKnown RBP11.39□□□□□ -0.59
CNEP1R1-206ENST00000565556 BRIP1Q9BX63 1249 aa11.39□□□□□ -0.59
CNEP1R1-206ENST00000565556 GZF1Q9H116 711 aaPredicted RBP11.39□□□□□ -0.59
CNEP1R1-206ENST00000565556 DBNLQ9UJU6 430 aaKnown RBP11.39□□□□□ -0.59
CNEP1R1-206ENST00000565556 KLRG2A4D1S0 409 aaPredicted RBP11.38□□□□□ -0.59
CNEP1R1-206ENST00000565556 TIMM10P62072 90 aa11.38□□□□□ -0.59
CNEP1R1-206ENST00000565556 PUM3Q15397 648 aaKnown RBP11.38□□□□□ -0.59
CNEP1R1-206ENST00000565556 GORABQ5T7V8 394 aa11.38□□□□□ -0.59
CNEP1R1-206ENST00000565556 CNTROBQ8N137 903 aa11.38□□□□□ -0.59
CNEP1R1-206ENST00000565556 GBP4Q96PP9 640 aa11.38□□□□□ -0.59
CNEP1R1-206ENST00000565556 DBNDD2Q9BQY9 259 aa11.38□□□□□ -0.59
CNEP1R1-206ENST00000565556 TLR7Q9NYK1 1049 aaKnown RBP11.38□□□□□ -0.59
CNEP1R1-206ENST00000565556 CLCN1P35523 988 aa11.38□□□□□ -0.59
CNEP1R1-206ENST00000565556 PDE6BP35913 854 aa11.38□□□□□ -0.59
CNEP1R1-206ENST00000565556 CCDC158Q5M9N0 1113 aa11.38□□□□□ -0.59
CNEP1R1-206ENST00000565556 LPIN2Q92539 896 aa11.38□□□□□ -0.59
CNEP1R1-206ENST00000565556 RILPL2Q969X0 211 aa11.38□□□□□ -0.59
CNEP1R1-206ENST00000565556 RBM17Q96I25 401 aaKnown RBP11.38□□□□□ -0.59
CNEP1R1-206ENST00000565556 TAF1P21675 1872 aa11.37□□□□□ -0.59
CNEP1R1-206ENST00000565556 SLC5A1P13866 664 aa11.37□□□□□ -0.59
CNEP1R1-206ENST00000565556 HOXA10P31260 410 aaPredicted RBP11.37□□□□□ -0.59
CNEP1R1-206ENST00000565556 CHRNDQ07001 517 aa11.37□□□□□ -0.59
CNEP1R1-206ENST00000565556 GRAPQ13588 217 aa11.37□□□□□ -0.59
CNEP1R1-206ENST00000565556 SKOR2Q2VWA4 1001 aaPredicted RBP11.37□□□□□ -0.59
CNEP1R1-206ENST00000565556 MSL1Q68DK7 614 aa11.37□□□□□ -0.59
CNEP1R1-206ENST00000565556 TBC1D9Q6ZT07 1266 aa11.37□□□□□ -0.59
CNEP1R1-206ENST00000565556 GRAPLQ8TC17 118 aaPredicted RBP11.37□□□□□ -0.59
CNEP1R1-206ENST00000565556 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms