RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 MAP3K2Q9Y2U5 619 aa24.33■■□□□ 1.49
SPSB3-207ENST00000565550 TLL2Q9Y6L7 1015 aa24.33■■□□□ 1.49
SPSB3-207ENST00000565550 PDE8AO60658 829 aa24.32■■□□□ 1.48
SPSB3-207ENST00000565550 CELF2O95319 508 aaKnown RBP24.32■■□□□ 1.48
SPSB3-207ENST00000565550 MAP2K1Q02750 393 aaPredicted RBP24.32■■□□□ 1.48
SPSB3-207ENST00000565550 GRM1Q13255 1194 aa24.32■■□□□ 1.48
SPSB3-207ENST00000565550 CCDC152Q4G0S7 254 aa24.32■■□□□ 1.48
SPSB3-207ENST00000565550 CYP4F22Q6NT55 531 aa24.32■■□□□ 1.48
SPSB3-207ENST00000565550 DPF2Q92785 391 aa24.32■■□□□ 1.48
SPSB3-207ENST00000565550 CCDC85AQ96PX6 553 aaPredicted RBP24.32■■□□□ 1.48
SPSB3-207ENST00000565550 KCNQ5Q9NR82 932 aa24.32■■□□□ 1.48
SPSB3-207ENST00000565550 ECE2O60344 883 aa24.31■■□□□ 1.48
SPSB3-207ENST00000565550 ECE1P42892 770 aa24.31■■□□□ 1.48
SPSB3-207ENST00000565550 LBX1P52954 281 aa24.31■■□□□ 1.48
SPSB3-207ENST00000565550 CCDC27Q2M243 656 aa24.31■■□□□ 1.48
SPSB3-207ENST00000565550 PODXL2Q9NZ53 605 aa24.31■■□□□ 1.48
SPSB3-207ENST00000565550 KSR2Q6VAB6 950 aa24.3■■□□□ 1.48
SPSB3-207ENST00000565550 CDC37L1Q7L3B6 337 aa24.3■■□□□ 1.48
SPSB3-207ENST00000565550 SAMD7Q7Z3H4 446 aa24.3■■□□□ 1.48
SPSB3-207ENST00000565550 ZC3H12CQ9C0D7 883 aaKnown RBP24.3■■□□□ 1.48
SPSB3-207ENST00000565550 PI4KAP2A4QPH2 592 aa24.29■■□□□ 1.48
SPSB3-207ENST00000565550 PI4KAP1Q8N8J0 262 aa24.29■■□□□ 1.48
SPSB3-207ENST00000565550 ANKIB1Q9P2G1 1089 aa24.29■■□□□ 1.48
SPSB3-207ENST00000565550 UFL1O94874 794 aa24.28■■□□□ 1.48
SPSB3-207ENST00000565550 SAPCD2Q86UD0 394 aa24.28■■□□□ 1.48
SPSB3-207ENST00000565550 STK31Q9BXU1 1019 aa24.28■■□□□ 1.48
SPSB3-207ENST00000565550 ZNF408Q9H9D4 720 aa24.28■■□□□ 1.48
SPSB3-207ENST00000565550 RTL9Q8NET4 1388 aa24.28■■□□□ 1.48
SPSB3-207ENST00000565550 IGKV5-2P06315 115 aa24.27■■□□□ 1.48
SPSB3-207ENST00000565550 HSPA8P11142 646 aaKnown RBP24.27■■□□□ 1.48
SPSB3-207ENST00000565550 TBC1D10BQ4KMP7 808 aaPredicted RBP24.27■■□□□ 1.48
SPSB3-207ENST00000565550 USP48Q86UV5 1035 aa24.27■■□□□ 1.48
SPSB3-207ENST00000565550 GGA1Q9UJY5 639 aa24.27■■□□□ 1.48
SPSB3-207ENST00000565550 TRPM7Q96QT4 1865 aa24.26■■□□□ 1.47
SPSB3-207ENST00000565550 RPS12P25398 132 aaKnown RBP24.26■■□□□ 1.47
SPSB3-207ENST00000565550 TWISTNBQ3B726 338 aaPredicted RBP24.26■■□□□ 1.47
SPSB3-207ENST00000565550 RBM26Q5T8P6 1007 aaKnown RBP24.26■■□□□ 1.47
SPSB3-207ENST00000565550 ANKRD18AQ8IVF6 992 aa24.26■■□□□ 1.47
SPSB3-207ENST00000565550 SPINK5Q9NQ38 1064 aaPredicted RBP24.26■■□□□ 1.47
SPSB3-207ENST00000565550 G3V3G9 751 aa24.25■■□□□ 1.47
SPSB3-207ENST00000565550 EGFRP00533 1210 aa24.25■■□□□ 1.47
SPSB3-207ENST00000565550 DCAF8Q5TAQ9 597 aa24.25■■□□□ 1.47
SPSB3-207ENST00000565550 DLK2Q6UY11 383 aa24.25■■□□□ 1.47
SPSB3-207ENST00000565550 G2E3Q7L622 706 aa24.25■■□□□ 1.47
SPSB3-207ENST00000565550 AOC2O75106 756 aa24.24■■□□□ 1.47
SPSB3-207ENST00000565550 VIL1P09327 827 aaKnown RBP24.24■■□□□ 1.47
SPSB3-207ENST00000565550 NEXNQ0ZGT2 675 aa24.24■■□□□ 1.47
SPSB3-207ENST00000565550 SLC4A2P04920 1241 aa24.23■■□□□ 1.47
SPSB3-207ENST00000565550 CTSWP56202 376 aa24.23■■□□□ 1.47
SPSB3-207ENST00000565550 CWF19L2Q2TBE0 894 aaKnown RBP24.23■■□□□ 1.47
SPSB3-207ENST00000565550 IL16Q14005 1332 aa24.22■■□□□ 1.47
SPSB3-207ENST00000565550 MAP2K2P36507 400 aa24.22■■□□□ 1.47
SPSB3-207ENST00000565550 NCBP3Q53F19 620 aaKnown RBP24.22■■□□□ 1.47
SPSB3-207ENST00000565550 TTLL11Q8NHH1 800 aa24.22■■□□□ 1.47
SPSB3-207ENST00000565550 HHIPL1Q96JK4 782 aa24.22■■□□□ 1.47
SPSB3-207ENST00000565550 BEGAINQ9BUH8 593 aa24.22■■□□□ 1.47
SPSB3-207ENST00000565550 XDHP47989 1333 aa24.21■■□□□ 1.47
SPSB3-207ENST00000565550 NEURL1BA8MQ27 555 aa24.21■■□□□ 1.47
SPSB3-207ENST00000565550 ATP2B4P23634 1241 aa24.21■■□□□ 1.47
SPSB3-207ENST00000565550 KRT26Q7Z3Y9 468 aa24.21■■□□□ 1.47
SPSB3-207ENST00000565550 CDC5LQ99459 802 aaKnown RBP24.21■■□□□ 1.47
SPSB3-207ENST00000565550 DCPSQ96C86 337 aaKnown RBP24.2■■□□□ 1.46
SPSB3-207ENST00000565550 GREM2Q9H772 168 aa24.2■■□□□ 1.46
SPSB3-207ENST00000565550 ZNF521Q96K83 1311 aa24.19■■□□□ 1.46
SPSB3-207ENST00000565550 FANCIQ9NVI1 1328 aa24.19■■□□□ 1.46
SPSB3-207ENST00000565550 H7C1W4 665 aa24.19■■□□□ 1.46
SPSB3-207ENST00000565550 KIF4BQ2VIQ3 1234 aa24.19■■□□□ 1.46
SPSB3-207ENST00000565550 WDR63Q8IWG1 891 aa24.19■■□□□ 1.46
SPSB3-207ENST00000565550 WTIPA6NIX2 430 aaPredicted RBP24.18■■□□□ 1.46
SPSB3-207ENST00000565550 RSBN1LQ6PCB5 846 aaPredicted RBP24.18■■□□□ 1.46
SPSB3-207ENST00000565550 BSDC1Q9NW68 430 aaPredicted RBP24.18■■□□□ 1.46
SPSB3-207ENST00000565550 MINPP1Q9UNW1 487 aa24.18■■□□□ 1.46
SPSB3-207ENST00000565550 THSD7BQ9C0I4 1608 aa24.17■■□□□ 1.46
SPSB3-207ENST00000565550 ADM5C9JUS6 153 aa24.17■■□□□ 1.46
SPSB3-207ENST00000565550 FLIIQ13045 1269 aa24.17■■□□□ 1.46
SPSB3-207ENST00000565550 UBE3BQ7Z3V4 1068 aa24.17■■□□□ 1.46
SPSB3-207ENST00000565550 SCN9AQ15858 1988 aa24.16■■□□□ 1.46
SPSB3-207ENST00000565550 HUNKP57058 714 aa24.16■■□□□ 1.46
SPSB3-207ENST00000565550 AGBL3Q8NEM8 1001 aa24.16■■□□□ 1.46
SPSB3-207ENST00000565550 TSKSQ9UJT2 592 aa24.16■■□□□ 1.46
SPSB3-207ENST00000565550 ASTN2O75129 1339 aaPredicted RBP24.15■■□□□ 1.46
SPSB3-207ENST00000565550 ZNF280AP59817 542 aaPredicted RBP24.15■■□□□ 1.46
SPSB3-207ENST00000565550 GCKRQ14397 625 aa24.15■■□□□ 1.46
SPSB3-207ENST00000565550 PODNQ7Z5L7 613 aa24.15■■□□□ 1.46
SPSB3-207ENST00000565550 USP17L3A6NCW0 530 aa24.14■■□□□ 1.45
SPSB3-207ENST00000565550 USP17L4A6NCW7 530 aa24.14■■□□□ 1.45
SPSB3-207ENST00000565550 VAMP4O75379 141 aa24.14■■□□□ 1.45
SPSB3-207ENST00000565550 FKBP5Q13451 457 aaPredicted RBP24.14■■□□□ 1.45
SPSB3-207ENST00000565550 USP17L1Q7RTZ2 530 aa24.14■■□□□ 1.45
SPSB3-207ENST00000565550 GMLQ99445 158 aa24.14■■□□□ 1.45
SPSB3-207ENST00000565550 GBA2Q9HCG7 927 aaPredicted RBP24.14■■□□□ 1.45
SPSB3-207ENST00000565550 GGA3Q9NZ52 723 aa24.14■■□□□ 1.45
SPSB3-207ENST00000565550 CCT4P50991 539 aaKnown RBP24.13■■□□□ 1.45
SPSB3-207ENST00000565550 SCARF1Q14162 830 aa24.13■■□□□ 1.45
SPSB3-207ENST00000565550 SULF1Q8IWU6 871 aa24.13■■□□□ 1.45
SPSB3-207ENST00000565550 C2orf69Q8N8R5 385 aa24.13■■□□□ 1.45
SPSB3-207ENST00000565550 DNAAF4Q8WXU2 420 aa24.13■■□□□ 1.45
SPSB3-207ENST00000565550 USP17L8P0C7I0 530 aa24.12■■□□□ 1.45
SPSB3-207ENST00000565550 BRPF1P55201 1214 aaPredicted RBP24.12■■□□□ 1.45
SPSB3-207ENST00000565550 CASP7P55210 303 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms