RNA–Protein interactions for RNA: ENST00000565210.5

CDH11-211, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-211ENST00000565210 BCL2L13Q9BXK5 485 aa28.36■■■□□ 2.13
CDH11-211ENST00000565210 TAF1P21675 1872 aa28.36■■■□□ 2.13
CDH11-211ENST00000565210 RIMBP2O15034 1052 aa28.35■■■□□ 2.13
CDH11-211ENST00000565210 CHADLQ6NUI6 762 aa28.35■■■□□ 2.13
CDH11-211ENST00000565210 CXCL9Q07325 125 aa28.34■■■□□ 2.13
CDH11-211ENST00000565210 IFIT5Q13325 482 aaKnown RBP28.34■■■□□ 2.13
CDH11-211ENST00000565210 LDHDQ86WU2 507 aa28.34■■■□□ 2.13
CDH11-211ENST00000565210 CHMP3Q9Y3E7 222 aa28.34■■■□□ 2.13
CDH11-211ENST00000565210 LRRC37AA6NMS7 1700 aa28.34■■■□□ 2.13
CDH11-211ENST00000565210 FAM161AQ3B820 660 aa28.33■■■□□ 2.13
CDH11-211ENST00000565210 EAPPQ56P03 285 aaPredicted RBP28.33■■■□□ 2.13
CDH11-211ENST00000565210 ANKRD2Q9GZV1 360 aa28.33■■■□□ 2.13
CDH11-211ENST00000565210 SCN4AP35499 1836 aa28.33■■■□□ 2.13
CDH11-211ENST00000565210 MINPP1Q9UNW1 487 aa28.32■■■□□ 2.12
CDH11-211ENST00000565210 CLEC11AQ9Y240 323 aa28.32■■■□□ 2.12
CDH11-211ENST00000565210 BRPF1P55201 1214 aaPredicted RBP28.31■■■□□ 2.12
CDH11-211ENST00000565210 FOXO4P98177 505 aa28.31■■■□□ 2.12
CDH11-211ENST00000565210 CCDC57Q2TAC2 916 aa28.31■■■□□ 2.12
CDH11-211ENST00000565210 COL4A5P29400 1685 aa28.31■■■□□ 2.12
CDH11-211ENST00000565210 RAD17O75943 681 aa28.3■■■□□ 2.12
CDH11-211ENST00000565210 TAF7LQ5H9L4 462 aa28.3■■■□□ 2.12
CDH11-211ENST00000565210 LMBR1LQ6UX01 489 aa28.3■■■□□ 2.12
CDH11-211ENST00000565210 API5Q9BZZ5 524 aaKnown RBP28.3■■■□□ 2.12
CDH11-211ENST00000565210 DBNDD1Q9H9R9 158 aa28.3■■■□□ 2.12
CDH11-211ENST00000565210 LEMD3Q9Y2U8 911 aa28.3■■■□□ 2.12
CDH11-211ENST00000565210 MYH3P11055 1940 aa28.3■■■□□ 2.12
CDH11-211ENST00000565210 ECE2O60344 883 aa28.29■■■□□ 2.12
CDH11-211ENST00000565210 SCNN1DP51172 638 aa28.28■■■□□ 2.12
CDH11-211ENST00000565210 DOK7Q18PE1 504 aa28.28■■■□□ 2.12
CDH11-211ENST00000565210 USP50Q70EL3 339 aaPredicted RBP28.28■■■□□ 2.12
CDH11-211ENST00000565210 UTYO14607 1347 aa28.27■■■□□ 2.12
CDH11-211ENST00000565210 CCT4P50991 539 aaKnown RBP28.27■■■□□ 2.12
CDH11-211ENST00000565210 RARSP54136 660 aaKnown RBP28.27■■■□□ 2.12
CDH11-211ENST00000565210 GPRC5DQ9NZD1 345 aa28.27■■■□□ 2.12
CDH11-211ENST00000565210 NOB1Q9ULX3 412 aaKnown RBP28.27■■■□□ 2.12
CDH11-211ENST00000565210 DUOX1Q9NRD9 1551 aa28.27■■■□□ 2.12
CDH11-211ENST00000565210 KIF16BQ96L93 1317 aa28.26■■■□□ 2.11
CDH11-211ENST00000565210 YDJCA8MPS7 323 aa28.26■■■□□ 2.11
CDH11-211ENST00000565210 ADARB2Q9NS39 739 aaKnown RBP28.26■■■□□ 2.11
CDH11-211ENST00000565210 EPS15P42566 896 aa28.25■■■□□ 2.11
CDH11-211ENST00000565210 KCNJ4P48050 445 aa28.25■■■□□ 2.11
CDH11-211ENST00000565210 GMPSP49915 693 aaPredicted RBP28.25■■■□□ 2.11
CDH11-211ENST00000565210 HDAC5Q9UQL6 1122 aa28.25■■■□□ 2.11
CDH11-211ENST00000565210 COL4A1P02462 1669 aa28.24■■■□□ 2.11
CDH11-211ENST00000565210 H7C1D1 291 aa28.24■■■□□ 2.11
CDH11-211ENST00000565210 IPO8O15397 1037 aaKnown RBP28.24■■■□□ 2.11
CDH11-211ENST00000565210 NBPF7P0C2Y1 421 aaPredicted RBP28.24■■■□□ 2.11
CDH11-211ENST00000565210 POTEIP0CG38 1075 aa28.24■■■□□ 2.11
CDH11-211ENST00000565210 POTEJP0CG39 1038 aa28.24■■■□□ 2.11
CDH11-211ENST00000565210 RPS12P25398 132 aaKnown RBP28.24■■■□□ 2.11
CDH11-211ENST00000565210 PODNQ7Z5L7 613 aa28.24■■■□□ 2.11
CDH11-211ENST00000565210 ARHGAP45Q92619 1136 aa28.24■■■□□ 2.11
CDH11-211ENST00000565210 SUCLG2Q96I99 432 aa28.24■■■□□ 2.11
CDH11-211ENST00000565210 GPR101Q96P66 508 aaPredicted RBP28.24■■■□□ 2.11
CDH11-211ENST00000565210 EPHA10Q5JZY3 1008 aa28.23■■■□□ 2.11
CDH11-211ENST00000565210 DPF2Q92785 391 aa28.23■■■□□ 2.11
CDH11-211ENST00000565210 PSMD14O00487 310 aa28.22■■■□□ 2.11
CDH11-211ENST00000565210 CHRNDQ07001 517 aa28.22■■■□□ 2.11
CDH11-211ENST00000565210 LDHAL6AQ6ZMR3 332 aa28.22■■■□□ 2.11
CDH11-211ENST00000565210 MED23Q9ULK4 1368 aa28.22■■■□□ 2.11
CDH11-211ENST00000565210 ZNF804BA4D1E1 1349 aa28.21■■■□□ 2.11
CDH11-211ENST00000565210 CNNM1Q9NRU3 951 aa28.21■■■□□ 2.11
CDH11-211ENST00000565210 CNOT7Q9UIV1 285 aaKnown RBP28.21■■■□□ 2.11
CDH11-211ENST00000565210 USP44Q9H0E7 712 aa28.2■■■□□ 2.1
CDH11-211ENST00000565210 ZBED9Q6R2W3 1325 aa28.19■■■□□ 2.1
CDH11-211ENST00000565210 LTBP1Q14766 1721 aa28.19■■■□□ 2.1
CDH11-211ENST00000565210 CNTROBQ8N137 903 aa28.19■■■□□ 2.1
CDH11-211ENST00000565210 COA1Q9GZY4 146 aa28.19■■■□□ 2.1
CDH11-211ENST00000565210 VIL1P09327 827 aaKnown RBP28.18■■■□□ 2.1
CDH11-211ENST00000565210 BICC1Q9H694 974 aaKnown RBP28.18■■■□□ 2.1
CDH11-211ENST00000565210 RABL6Q3YEC7 729 aaPredicted RBP28.17■■■□□ 2.1
CDH11-211ENST00000565210 ZBTB12Q9Y330 459 aaPredicted RBP28.17■■■□□ 2.1
CDH11-211ENST00000565210 MAP1SQ66K74 1059 aaPredicted RBP28.16■■■□□ 2.1
CDH11-211ENST00000565210 MICALL2Q8IY33 904 aa28.16■■■□□ 2.1
CDH11-211ENST00000565210 AGBL3Q8NEM8 1001 aa28.16■■■□□ 2.1
CDH11-211ENST00000565210 ZC3H15Q8WU90 426 aaKnown RBP28.16■■■□□ 2.1
CDH11-211ENST00000565210 KAZALD1Q96I82 304 aa28.16■■■□□ 2.1
CDH11-211ENST00000565210 USP17L3A6NCW0 530 aa28.15■■■□□ 2.1
CDH11-211ENST00000565210 USP17L4A6NCW7 530 aa28.15■■■□□ 2.1
CDH11-211ENST00000565210 UBTFL1P0CB47 393 aaPredicted RBP28.15■■■□□ 2.1
CDH11-211ENST00000565210 USP17L1Q7RTZ2 530 aa28.15■■■□□ 2.1
CDH11-211ENST00000565210 ZNF594Q96JF6 807 aaPredicted RBP28.15■■■□□ 2.1
CDH11-211ENST00000565210 KCNQ5Q9NR82 932 aa28.15■■■□□ 2.1
CDH11-211ENST00000565210 ITGBL1O95965 494 aaPredicted RBP28.14■■■□□ 2.1
CDH11-211ENST00000565210 CREBZFQ9NS37 354 aa28.14■■■□□ 2.1
CDH11-211ENST00000565210 TAF5LO75529 589 aa28.13■■■□□ 2.09
CDH11-211ENST00000565210 RSBN1LQ6PCB5 846 aaPredicted RBP28.13■■■□□ 2.09
CDH11-211ENST00000565210 FRAT1Q92837 279 aaPredicted RBP28.13■■■□□ 2.09
CDH11-211ENST00000565210 PASKQ96RG2 1323 aa28.13■■■□□ 2.09
CDH11-211ENST00000565210 PLIN1O60240 522 aa28.12■■■□□ 2.09
CDH11-211ENST00000565210 HELBQ8NG08 1087 aaPredicted RBP28.12■■■□□ 2.09
CDH11-211ENST00000565210 C15orf52Q6ZUT6 534 aaKnown RBP28.11■■■□□ 2.09
CDH11-211ENST00000565210 DNAJC5GQ8N7S2 189 aa28.11■■■□□ 2.09
CDH11-211ENST00000565210 ANKRD44Q8N8A2 993 aa28.11■■■□□ 2.09
CDH11-211ENST00000565210 MROH5Q6ZUA9 1318 aa28.11■■■□□ 2.09
CDH11-211ENST00000565210 WTIPA6NIX2 430 aaPredicted RBP28.1■■■□□ 2.09
CDH11-211ENST00000565210 TMEM88BA6NKF7 163 aa28.1■■■□□ 2.09
CDH11-211ENST00000565210 HTRA3P83110 453 aa28.1■■■□□ 2.09
CDH11-211ENST00000565210 STRIP1Q5VSL9 837 aa28.1■■■□□ 2.09
CDH11-211ENST00000565210 INTS3Q68E01 1043 aaKnown RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms