RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 PODXL2Q9NZ53 605 aa18.87■□□□□ 0.61
USB1-210ENST00000565151 MKRN1Q9UHC7 482 aaKnown RBP18.87■□□□□ 0.61
USB1-210ENST00000565151 ZBTB12Q9Y330 459 aaPredicted RBP18.87■□□□□ 0.61
USB1-210ENST00000565151 F6X3S4 739 aa18.86■□□□□ 0.61
USB1-210ENST00000565151 C6orf229H3BNL8 230 aa18.86■□□□□ 0.61
USB1-210ENST00000565151 GCKRQ14397 625 aa18.86■□□□□ 0.61
USB1-210ENST00000565151 UBE3BQ7Z3V4 1068 aa18.86■□□□□ 0.61
USB1-210ENST00000565151 TRAF5O00463 557 aa18.85■□□□□ 0.61
USB1-210ENST00000565151 PSMD14O00487 310 aa18.85■□□□□ 0.61
USB1-210ENST00000565151 LMOD1P29536 600 aaPredicted RBP18.85■□□□□ 0.61
USB1-210ENST00000565151 FKBP5Q13451 457 aaPredicted RBP18.85■□□□□ 0.61
USB1-210ENST00000565151 USP50Q70EL3 339 aaPredicted RBP18.85■□□□□ 0.61
USB1-210ENST00000565151 TRPM4Q8TD43 1214 aa18.85■□□□□ 0.61
USB1-210ENST00000565151 DNAAF4Q8WXU2 420 aa18.85■□□□□ 0.61
USB1-210ENST00000565151 CNTNAP1P78357 1384 aa18.84■□□□□ 0.61
USB1-210ENST00000565151 EGFRP00533 1210 aa18.84■□□□□ 0.61
USB1-210ENST00000565151 ADARB2Q9NS39 739 aaKnown RBP18.84■□□□□ 0.61
USB1-210ENST00000565151 TMEM88BA6NKF7 163 aa18.83■□□□□ 0.6
USB1-210ENST00000565151 ECE2O60344 883 aa18.83■□□□□ 0.6
USB1-210ENST00000565151 NEXNQ0ZGT2 675 aa18.83■□□□□ 0.6
USB1-210ENST00000565151 CST9Q5W186 159 aa18.83■□□□□ 0.6
USB1-210ENST00000565151 PGAP2Q9UHJ9 254 aa18.83■□□□□ 0.6
USB1-210ENST00000565151 UFL1O94874 794 aa18.82■□□□□ 0.6
USB1-210ENST00000565151 TNIP1Q15025 636 aa18.82■□□□□ 0.6
USB1-210ENST00000565151 ANKRD18AQ8IVF6 992 aa18.82■□□□□ 0.6
USB1-210ENST00000565151 LINS1Q8NG48 757 aa18.82■□□□□ 0.6
USB1-210ENST00000565151 PLA2G12BQ9BX93 195 aa18.82■□□□□ 0.6
USB1-210ENST00000565151 CNOT7Q9UIV1 285 aaKnown RBP18.82■□□□□ 0.6
USB1-210ENST00000565151 CSF1RP07333 972 aa18.81■□□□□ 0.6
USB1-210ENST00000565151 HSP90B1P14625 803 aaKnown RBP18.81■□□□□ 0.6
USB1-210ENST00000565151 BEND3Q5T5X7 828 aa18.81■□□□□ 0.6
USB1-210ENST00000565151 DLK2Q6UY11 383 aa18.81■□□□□ 0.6
USB1-210ENST00000565151 GGA1Q9UJY5 639 aa18.81■□□□□ 0.6
USB1-210ENST00000565151 MINPP1Q9UNW1 487 aa18.81■□□□□ 0.6
USB1-210ENST00000565151 HSPA1AP0DMV8 641 aaKnown RBP18.8■□□□□ 0.6
USB1-210ENST00000565151 HSPA1BP0DMV9 641 aaKnown RBP18.8■□□□□ 0.6
USB1-210ENST00000565151 VEGFBP49765 207 aa18.8■□□□□ 0.6
USB1-210ENST00000565151 FOXO4P98177 505 aa18.8■□□□□ 0.6
USB1-210ENST00000565151 FAM161AQ3B820 660 aa18.8■□□□□ 0.6
USB1-210ENST00000565151 COL13A1Q5TAT6 717 aaPredicted RBP18.8■□□□□ 0.6
USB1-210ENST00000565151 SAMD7Q7Z3H4 446 aa18.8■□□□□ 0.6
USB1-210ENST00000565151 MICALL2Q8IY33 904 aa18.8■□□□□ 0.6
USB1-210ENST00000565151 BCL2L13Q9BXK5 485 aa18.8■□□□□ 0.6
USB1-210ENST00000565151 ANKIB1Q9P2G1 1089 aa18.8■□□□□ 0.6
USB1-210ENST00000565151 EPHA10Q5JZY3 1008 aa18.79■□□□□ 0.6
USB1-210ENST00000565151 EYA3Q99504 573 aa18.79■□□□□ 0.6
USB1-210ENST00000565151 GLIS2Q9BZE0 524 aaPredicted RBP18.79■□□□□ 0.6
USB1-210ENST00000565151 ZC3H12CQ9C0D7 883 aaKnown RBP18.79■□□□□ 0.6
USB1-210ENST00000565151 MYH16Q9H6N6 1097 aa18.79■□□□□ 0.6
USB1-210ENST00000565151 BSDC1Q9NW68 430 aaPredicted RBP18.79■□□□□ 0.6
USB1-210ENST00000565151 THSD7BQ9C0I4 1608 aa18.78■□□□□ 0.6
USB1-210ENST00000565151 XDHP47989 1333 aa18.78■□□□□ 0.6
USB1-210ENST00000565151 VIL1P09327 827 aaKnown RBP18.78■□□□□ 0.6
USB1-210ENST00000565151 IFFO2Q5TF58 517 aa18.78■□□□□ 0.6
USB1-210ENST00000565151 TXNRD3Q86VQ6 643 aa18.78■□□□□ 0.6
USB1-210ENST00000565151 DPF2Q92785 391 aa18.78■□□□□ 0.6
USB1-210ENST00000565151 RASSF10A6NK89 507 aa18.77■□□□□ 0.6
USB1-210ENST00000565151 ITGA6P23229 1130 aa18.77■□□□□ 0.6
USB1-210ENST00000565151 KLRK1P26718 216 aa18.77■□□□□ 0.6
USB1-210ENST00000565151 CDCA7LQ96GN5 454 aa18.77■□□□□ 0.6
USB1-210ENST00000565151 CDC5LQ99459 802 aaKnown RBP18.77■□□□□ 0.6
USB1-210ENST00000565151 ASTN2O75129 1339 aaPredicted RBP18.76■□□□□ 0.59
USB1-210ENST00000565151 ATP2B4P23634 1241 aa18.76■□□□□ 0.59
USB1-210ENST00000565151 TBC1D10BQ4KMP7 808 aaPredicted RBP18.76■□□□□ 0.59
USB1-210ENST00000565151 GMLQ99445 158 aa18.76■□□□□ 0.59
USB1-210ENST00000565151 SNAP23O00161 211 aa18.75■□□□□ 0.59
USB1-210ENST00000565151 CCT4P50991 539 aaKnown RBP18.75■□□□□ 0.59
USB1-210ENST00000565151 MRPL50Q8N5N7 158 aaKnown RBP18.75■□□□□ 0.59
USB1-210ENST00000565151 KAZALD1Q96I82 304 aa18.75■□□□□ 0.59
USB1-210ENST00000565151 IRS2Q9Y4H2 1338 aa18.74■□□□□ 0.59
USB1-210ENST00000565151 ZNF609O15014 1411 aa18.74■□□□□ 0.59
USB1-210ENST00000565151 H7C1D1 291 aa18.74■□□□□ 0.59
USB1-210ENST00000565151 SLFN5Q08AF3 891 aa18.74■□□□□ 0.59
USB1-210ENST00000565151 DEFB115Q30KQ5 88 aa18.74■□□□□ 0.59
USB1-210ENST00000565151 ZC3H15Q8WU90 426 aaKnown RBP18.74■□□□□ 0.59
USB1-210ENST00000565151 MXD3Q9BW11 206 aa18.74■□□□□ 0.59
USB1-210ENST00000565151 MED23Q9ULK4 1368 aa18.73■□□□□ 0.59
USB1-210ENST00000565151 GRM8O00222 908 aa18.72■□□□□ 0.59
USB1-210ENST00000565151 RPS12P25398 132 aaKnown RBP18.72■□□□□ 0.59
USB1-210ENST00000565151 RBM26Q5T8P6 1007 aaKnown RBP18.72■□□□□ 0.59
USB1-210ENST00000565151 RSBN1LQ6PCB5 846 aaPredicted RBP18.72■□□□□ 0.59
USB1-210ENST00000565151 USP48Q86UV5 1035 aa18.72■□□□□ 0.59
USB1-210ENST00000565151 TRMT2AQ8IZ69 625 aaKnown RBP18.72■□□□□ 0.59
USB1-210ENST00000565151 ABT1Q9ULW3 272 aaKnown RBP18.72■□□□□ 0.59
USB1-210ENST00000565151 FOXN1O15353 648 aa18.71■□□□□ 0.59
USB1-210ENST00000565151 ZNF280AP59817 542 aaPredicted RBP18.71■□□□□ 0.59
USB1-210ENST00000565151 SLC4A10Q6U841 1118 aa18.71■□□□□ 0.59
USB1-210ENST00000565151 LMBR1LQ6UX01 489 aa18.71■□□□□ 0.59
USB1-210ENST00000565151 SSH1Q8WYL5 1049 aa18.71■□□□□ 0.59
USB1-210ENST00000565151 ZNF594Q96JF6 807 aaPredicted RBP18.71■□□□□ 0.59
USB1-210ENST00000565151 TLL2Q9Y6L7 1015 aa18.71■□□□□ 0.59
USB1-210ENST00000565151 WDR33Q9C0J8 1336 aaKnown RBP18.71■□□□□ 0.59
USB1-210ENST00000565151 ADM5C9JUS6 153 aa18.7■□□□□ 0.58
USB1-210ENST00000565151 CELF2O95319 508 aaKnown RBP18.7■□□□□ 0.58
USB1-210ENST00000565151 IGHMBP2P38935 993 aaKnown RBP18.7■□□□□ 0.58
USB1-210ENST00000565151 CHRNDQ07001 517 aa18.7■□□□□ 0.58
USB1-210ENST00000565151 DACT2Q5SW24 774 aa18.7■□□□□ 0.58
USB1-210ENST00000565151 CYP4F22Q6NT55 531 aa18.7■□□□□ 0.58
USB1-210ENST00000565151 HELBQ8NG08 1087 aaPredicted RBP18.7■□□□□ 0.58
USB1-210ENST00000565151 E9PSI1 815 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms