RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 QTRT2Q9H974 415 aaKnown RBP9.52□□□□□ -0.89
CHD9-214ENST00000565119 MMP20O60882 483 aa9.51□□□□□ -0.89
CHD9-214ENST00000565119 XYLBO75191 536 aa9.51□□□□□ -0.89
CHD9-214ENST00000565119 PSAPP07602 524 aa9.51□□□□□ -0.89
CHD9-214ENST00000565119 HDGFL1Q5TGJ6 251 aa9.51□□□□□ -0.89
CHD9-214ENST00000565119 FAM46AQ96IP4 442 aaKnown RBP9.51□□□□□ -0.89
CHD9-214ENST00000565119 CEP41Q9BYV8 373 aa9.51□□□□□ -0.89
CHD9-214ENST00000565119 KCNK4Q9NYG8 393 aa9.51□□□□□ -0.89
CHD9-214ENST00000565119 PPME1Q9Y570 386 aa9.51□□□□□ -0.89
CHD9-214ENST00000565119 HOXD8P13378 290 aaPredicted RBP9.5□□□□□ -0.89
CHD9-214ENST00000565119 ACAD11Q709F0 780 aa9.5□□□□□ -0.89
CHD9-214ENST00000565119 TM4SF5O14894 197 aa9.49□□□□□ -0.89
CHD9-214ENST00000565119 UVSSAQ2YD98 709 aa9.49□□□□□ -0.89
CHD9-214ENST00000565119 KRTAP4-2Q9BYR5 136 aa9.49□□□□□ -0.89
CHD9-214ENST00000565119 MUC3BQ9H195 1237 aa9.49□□□□□ -0.89
CHD9-214ENST00000565119 LINC01387J3KSC0 135 aa9.48□□□□□ -0.89
CHD9-214ENST00000565119 CD68P34810 354 aaPredicted RBP9.48□□□□□ -0.89
CHD9-214ENST00000565119 C11orf91Q3C1V1 193 aa9.48□□□□□ -0.89
CHD9-214ENST00000565119 SHKBP1Q8TBC3 707 aa9.48□□□□□ -0.89
CHD9-214ENST00000565119 MYRFLQ96LU7 910 aa9.48□□□□□ -0.89
CHD9-214ENST00000565119 RBSNQ9H1K0 784 aa9.48□□□□□ -0.89
CHD9-214ENST00000565119 SOX18P35713 384 aa9.47□□□□□ -0.89
CHD9-214ENST00000565119 OGFOD2Q6N063 350 aa9.47□□□□□ -0.89
CHD9-214ENST00000565119 KIAA1211Q6ZU35 1233 aa9.47□□□□□ -0.89
CHD9-214ENST00000565119 CMTR1Q8N1G2 835 aaKnown RBP9.47□□□□□ -0.89
CHD9-214ENST00000565119 TXNDC11Q6PKC3 985 aa9.46□□□□□ -0.9
CHD9-214ENST00000565119 RGL4Q8IZJ4 473 aa9.46□□□□□ -0.9
CHD9-214ENST00000565119 ABI1Q8IZP0 508 aa9.46□□□□□ -0.9
CHD9-214ENST00000565119 CACTIN-AS1Q8N1I8 211 aa9.46□□□□□ -0.9
CHD9-214ENST00000565119 KCNMB2Q9Y691 235 aa9.46□□□□□ -0.9
CHD9-214ENST00000565119 HOXA10P31260 410 aaPredicted RBP9.45□□□□□ -0.9
CHD9-214ENST00000565119 FAM20CQ8IXL6 584 aa9.45□□□□□ -0.9
CHD9-214ENST00000565119 MYO19Q96H55 970 aa9.45□□□□□ -0.9
CHD9-214ENST00000565119 DPYDQ12882 1025 aa9.44□□□□□ -0.9
CHD9-214ENST00000565119 CLEC10AQ8IUN9 316 aa9.44□□□□□ -0.9
CHD9-214ENST00000565119 FAM83CQ9BQN1 747 aa9.44□□□□□ -0.9
CHD9-214ENST00000565119 CRTC2Q53ET0 693 aaPredicted RBP9.43□□□□□ -0.9
CHD9-214ENST00000565119 CARD10Q9BWT7 1032 aa9.43□□□□□ -0.9
CHD9-214ENST00000565119 LRFN2Q9ULH4 789 aa9.43□□□□□ -0.9
CHD9-214ENST00000565119 ADAMTSL4Q6UY14 1074 aa9.42□□□□□ -0.9
CHD9-214ENST00000565119 TREML1Q86YW5 311 aa9.42□□□□□ -0.9
CHD9-214ENST00000565119 LACRTQ9GZZ8 138 aa9.42□□□□□ -0.9
CHD9-214ENST00000565119 C8AP07357 584 aa9.41□□□□□ -0.9
CHD9-214ENST00000565119 CDC25BP30305 580 aa9.41□□□□□ -0.9
CHD9-214ENST00000565119 PTK7Q13308 1070 aa9.41□□□□□ -0.9
CHD9-214ENST00000565119 LARP1Q6PKG0 1096 aaKnown RBP9.41□□□□□ -0.9
CHD9-214ENST00000565119 COL26A1Q96A83 441 aa9.41□□□□□ -0.9
CHD9-214ENST00000565119 WDR64B1ANS9 1081 aa9.4□□□□□ -0.9
CHD9-214ENST00000565119 DDX3YO15523 660 aaKnown RBP9.4□□□□□ -0.9
CHD9-214ENST00000565119 BMP3P12645 472 aa9.4□□□□□ -0.9
CHD9-214ENST00000565119 ATP11AP98196 1134 aa9.4□□□□□ -0.9
CHD9-214ENST00000565119 DUOXA2Q1HG44 320 aa9.4□□□□□ -0.9
CHD9-214ENST00000565119 LCE4AQ5TA78 99 aa9.4□□□□□ -0.9
CHD9-214ENST00000565119 COL13A1Q5TAT6 717 aaPredicted RBP9.4□□□□□ -0.9
CHD9-214ENST00000565119 BEND4Q6ZU67 534 aa9.4□□□□□ -0.9
CHD9-214ENST00000565119 UBASH3BQ8TF42 649 aa9.4□□□□□ -0.9
CHD9-214ENST00000565119 FOXD4L4Q8WXT5 416 aaPredicted RBP9.4□□□□□ -0.9
CHD9-214ENST00000565119 TFIP11Q9UBB9 837 aaKnown RBP9.4□□□□□ -0.9
CHD9-214ENST00000565119 MAFBQ9Y5Q3 323 aaPredicted RBP9.4□□□□□ -0.9
CHD9-214ENST00000565119 ADAM11O75078 769 aa9.39□□□□□ -0.91
CHD9-214ENST00000565119 CDC27P30260 824 aa9.39□□□□□ -0.91
CHD9-214ENST00000565119 WEE1P30291 646 aa9.39□□□□□ -0.91
CHD9-214ENST00000565119 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.39□□□□□ -0.91
CHD9-214ENST00000565119 KCNF1Q9H3M0 494 aa9.39□□□□□ -0.91
CHD9-214ENST00000565119 FSCN2O14926 492 aa9.38□□□□□ -0.91
CHD9-214ENST00000565119 FOXO3O43524 673 aa9.38□□□□□ -0.91
CHD9-214ENST00000565119 RAD21O60216 631 aa9.38□□□□□ -0.91
CHD9-214ENST00000565119 TRIP4Q15650 581 aaPredicted RBP9.38□□□□□ -0.91
CHD9-214ENST00000565119 CEP135Q66GS9 1140 aa9.38□□□□□ -0.91
CHD9-214ENST00000565119 NLRP13Q86W25 1043 aa9.38□□□□□ -0.91
CHD9-214ENST00000565119 POU5F2Q8N7G0 328 aa9.38□□□□□ -0.91
CHD9-214ENST00000565119 PREPP48147 710 aa9.37□□□□□ -0.91
CHD9-214ENST00000565119 CBLL1Q75N03 491 aa9.37□□□□□ -0.91
CHD9-214ENST00000565119 KLHL23Q8NBE8 558 aa9.37□□□□□ -0.91
CHD9-214ENST00000565119 VTI1AQ96AJ9 217 aa9.37□□□□□ -0.91
CHD9-214ENST00000565119 PIM2Q9P1W9 311 aa9.37□□□□□ -0.91
CHD9-214ENST00000565119 NFXL1Q6ZNB6 911 aa9.36□□□□□ -0.91
CHD9-214ENST00000565119 ANKMY2Q8IV38 441 aa9.36□□□□□ -0.91
CHD9-214ENST00000565119 OR13H1Q8NG92 308 aa9.36□□□□□ -0.91
CHD9-214ENST00000565119 MFSD14AQ96MC6 490 aa9.36□□□□□ -0.91
CHD9-214ENST00000565119 SART1O43290 800 aaKnown RBP9.35□□□□□ -0.91
CHD9-214ENST00000565119 KANK4Q5T7N3 995 aaPredicted RBP9.35□□□□□ -0.91
CHD9-214ENST00000565119 KLHDC7BQ96G42 594 aa9.35□□□□□ -0.91
CHD9-214ENST00000565119 ANGEL1Q9UNK9 670 aaKnown RBP9.35□□□□□ -0.91
CHD9-214ENST00000565119 EPHA1P21709 976 aa9.34□□□□□ -0.91
CHD9-214ENST00000565119 MSMPQ1L6U9 139 aa9.34□□□□□ -0.91
CHD9-214ENST00000565119 RASSF4Q9H2L5 321 aa9.34□□□□□ -0.91
CHD9-214ENST00000565119 SH2B1Q9NRF2 756 aaPredicted RBP9.34□□□□□ -0.91
CHD9-214ENST00000565119 CCDC39Q9UFE4 941 aa9.34□□□□□ -0.91
CHD9-214ENST00000565119 USP17L15C9J2P7 530 aa9.33□□□□□ -0.92
CHD9-214ENST00000565119 USP17L10C9JJH3 530 aa9.33□□□□□ -0.92
CHD9-214ENST00000565119 USP17L13C9JLJ4 530 aa9.33□□□□□ -0.92
CHD9-214ENST00000565119 USP17L12C9JPN9 530 aa9.33□□□□□ -0.92
CHD9-214ENST00000565119 USP17L11C9JVI0 530 aa9.33□□□□□ -0.92
CHD9-214ENST00000565119 USP17L21D6R901 530 aa9.33□□□□□ -0.92
CHD9-214ENST00000565119 USP17L18D6R9N7 530 aa9.33□□□□□ -0.92
CHD9-214ENST00000565119 USP17L22D6RA61 530 aa9.33□□□□□ -0.92
CHD9-214ENST00000565119 USP17L17D6RBQ6 530 aa9.33□□□□□ -0.92
CHD9-214ENST00000565119 USP17L19D6RCP7 530 aa9.33□□□□□ -0.92
CHD9-214ENST00000565119 USP17L20D6RJB6 530 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms