RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 TTLL11Q8NHH1 800 aa12.83□□□□□ -0.36
CMTM3-209ENST00000565003 EYA3Q99504 573 aa12.83□□□□□ -0.36
CMTM3-209ENST00000565003 BCL2L13Q9BXK5 485 aa12.83□□□□□ -0.36
CMTM3-209ENST00000565003 MYH16Q9H6N6 1097 aa12.83□□□□□ -0.36
CMTM3-209ENST00000565003 GREM2Q9H772 168 aa12.83□□□□□ -0.36
CMTM3-209ENST00000565003 KCNQ5Q9NR82 932 aa12.83□□□□□ -0.36
CMTM3-209ENST00000565003 ANKIB1Q9P2G1 1089 aa12.83□□□□□ -0.36
CMTM3-209ENST00000565003 ZNF521Q96K83 1311 aa12.83□□□□□ -0.36
CMTM3-209ENST00000565003 RTL9Q8NET4 1388 aa12.82□□□□□ -0.36
CMTM3-209ENST00000565003 SCN9AQ15858 1988 aa12.82□□□□□ -0.36
CMTM3-209ENST00000565003 PSMD14O00487 310 aa12.82□□□□□ -0.36
CMTM3-209ENST00000565003 CASP7P55210 303 aa12.82□□□□□ -0.36
CMTM3-209ENST00000565003 LINS1Q8NG48 757 aa12.82□□□□□ -0.36
CMTM3-209ENST00000565003 TRPM4Q8TD43 1214 aa12.82□□□□□ -0.36
CMTM3-209ENST00000565003 CDC5LQ99459 802 aaKnown RBP12.82□□□□□ -0.36
CMTM3-209ENST00000565003 GGA1Q9UJY5 639 aa12.82□□□□□ -0.36
CMTM3-209ENST00000565003 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
CMTM3-209ENST00000565003 SPEF2Q9C093 1822 aa12.82□□□□□ -0.36
CMTM3-209ENST00000565003 PCNTO95613 3336 aa12.82□□□□□ -0.36
CMTM3-209ENST00000565003 WTIPA6NIX2 430 aaPredicted RBP12.81□□□□□ -0.36
CMTM3-209ENST00000565003 F6X3S4 739 aa12.81□□□□□ -0.36
CMTM3-209ENST00000565003 TRAF5O00463 557 aa12.81□□□□□ -0.36
CMTM3-209ENST00000565003 HSPA1AP0DMV8 641 aaKnown RBP12.81□□□□□ -0.36
CMTM3-209ENST00000565003 HSPA1BP0DMV9 641 aaKnown RBP12.81□□□□□ -0.36
CMTM3-209ENST00000565003 HIRAP54198 1017 aaPredicted RBP12.81□□□□□ -0.36
CMTM3-209ENST00000565003 MICALL2Q8IY33 904 aa12.81□□□□□ -0.36
CMTM3-209ENST00000565003 PLA2G12BQ9BX93 195 aa12.81□□□□□ -0.36
CMTM3-209ENST00000565003 CNOT7Q9UIV1 285 aaKnown RBP12.81□□□□□ -0.36
CMTM3-209ENST00000565003 XDHP47989 1333 aa12.81□□□□□ -0.36
CMTM3-209ENST00000565003 FAM161AQ3B820 660 aa12.8□□□□□ -0.36
CMTM3-209ENST00000565003 ZC3H12CQ9C0D7 883 aaKnown RBP12.8□□□□□ -0.36
CMTM3-209ENST00000565003 EGFRP00533 1210 aa12.79□□□□□ -0.36
CMTM3-209ENST00000565003 VEGFBP49765 207 aa12.79□□□□□ -0.36
CMTM3-209ENST00000565003 BEND3Q5T5X7 828 aa12.79□□□□□ -0.36
CMTM3-209ENST00000565003 IFFO2Q5TF58 517 aa12.79□□□□□ -0.36
CMTM3-209ENST00000565003 GLIS2Q9BZE0 524 aaPredicted RBP12.79□□□□□ -0.36
CMTM3-209ENST00000565003 BSDC1Q9NW68 430 aaPredicted RBP12.79□□□□□ -0.36
CMTM3-209ENST00000565003 PGAP2Q9UHJ9 254 aa12.79□□□□□ -0.36
CMTM3-209ENST00000565003 ABT1Q9ULW3 272 aaKnown RBP12.79□□□□□ -0.36
CMTM3-209ENST00000565003 MINPP1Q9UNW1 487 aa12.79□□□□□ -0.36
CMTM3-209ENST00000565003 RASSF10A6NK89 507 aa12.78□□□□□ -0.36
CMTM3-209ENST00000565003 H7C1D1 291 aa12.78□□□□□ -0.36
CMTM3-209ENST00000565003 CSF1RP07333 972 aa12.78□□□□□ -0.36
CMTM3-209ENST00000565003 ITGA6P23229 1130 aa12.78□□□□□ -0.36
CMTM3-209ENST00000565003 COL13A1Q5TAT6 717 aaPredicted RBP12.78□□□□□ -0.36
CMTM3-209ENST00000565003 CST9Q5W186 159 aa12.78□□□□□ -0.36
CMTM3-209ENST00000565003 SAMD7Q7Z3H4 446 aa12.78□□□□□ -0.36
CMTM3-209ENST00000565003 DPF2Q92785 391 aa12.78□□□□□ -0.36
CMTM3-209ENST00000565003 TRPM7Q96QT4 1865 aa12.78□□□□□ -0.36
CMTM3-209ENST00000565003 PSME4Q14997 1843 aa12.77□□□□□ -0.37
CMTM3-209ENST00000565003 VIL1P09327 827 aaKnown RBP12.77□□□□□ -0.37
CMTM3-209ENST00000565003 ATP2B4P23634 1241 aa12.77□□□□□ -0.37
CMTM3-209ENST00000565003 RPS12P25398 132 aaKnown RBP12.77□□□□□ -0.37
CMTM3-209ENST00000565003 TBC1D10BQ4KMP7 808 aaPredicted RBP12.77□□□□□ -0.37
CMTM3-209ENST00000565003 ZC3H15Q8WU90 426 aaKnown RBP12.77□□□□□ -0.37
CMTM3-209ENST00000565003 MED23Q9ULK4 1368 aa12.77□□□□□ -0.37
CMTM3-209ENST00000565003 G3V3G9 751 aa12.76□□□□□ -0.37
CMTM3-209ENST00000565003 IGHMBP2P38935 993 aaKnown RBP12.76□□□□□ -0.37
CMTM3-209ENST00000565003 CCT4P50991 539 aaKnown RBP12.76□□□□□ -0.37
CMTM3-209ENST00000565003 FOXO4P98177 505 aa12.76□□□□□ -0.37
CMTM3-209ENST00000565003 DEFB115Q30KQ5 88 aa12.76□□□□□ -0.37
CMTM3-209ENST00000565003 DCAF8Q5TAQ9 597 aa12.76□□□□□ -0.37
CMTM3-209ENST00000565003 ZNF609O15014 1411 aa12.76□□□□□ -0.37
CMTM3-209ENST00000565003 CELF2O95319 508 aaKnown RBP12.75□□□□□ -0.37
CMTM3-209ENST00000565003 KLRK1P26718 216 aa12.75□□□□□ -0.37
CMTM3-209ENST00000565003 EPHA10Q5JZY3 1008 aa12.75□□□□□ -0.37
CMTM3-209ENST00000565003 TXNRD3Q86VQ6 643 aa12.75□□□□□ -0.37
CMTM3-209ENST00000565003 ZNF646O15015 1829 aaPredicted RBP12.74□□□□□ -0.37
CMTM3-209ENST00000565003 THSD7BQ9C0I4 1608 aa12.74□□□□□ -0.37
CMTM3-209ENST00000565003 ANKRD18BA2A2Z9 1011 aa12.74□□□□□ -0.37
CMTM3-209ENST00000565003 E9PSI1 815 aa12.74□□□□□ -0.37
CMTM3-209ENST00000565003 GRM8O00222 908 aa12.74□□□□□ -0.37
CMTM3-209ENST00000565003 KIF4BQ2VIQ3 1234 aa12.74□□□□□ -0.37
CMTM3-209ENST00000565003 RBM26Q5T8P6 1007 aaKnown RBP12.74□□□□□ -0.37
CMTM3-209ENST00000565003 RSBN1LQ6PCB5 846 aaPredicted RBP12.74□□□□□ -0.37
CMTM3-209ENST00000565003 SLC4A10Q6U841 1118 aa12.74□□□□□ -0.37
CMTM3-209ENST00000565003 DLK2Q6UY11 383 aa12.74□□□□□ -0.37
CMTM3-209ENST00000565003 CDC37L1Q7L3B6 337 aa12.74□□□□□ -0.37
CMTM3-209ENST00000565003 MPHOSPH8Q99549 860 aa12.74□□□□□ -0.37
CMTM3-209ENST00000565003 LEMD3Q9Y2U8 911 aa12.74□□□□□ -0.37
CMTM3-209ENST00000565003 TLL2Q9Y6L7 1015 aa12.74□□□□□ -0.37
CMTM3-209ENST00000565003 ZNF804BA4D1E1 1349 aa12.73□□□□□ -0.37
CMTM3-209ENST00000565003 ASTN2O75129 1339 aaPredicted RBP12.73□□□□□ -0.37
CMTM3-209ENST00000565003 WDR33Q9C0J8 1336 aaKnown RBP12.73□□□□□ -0.37
CMTM3-209ENST00000565003 USP17L3A6NCW0 530 aa12.73□□□□□ -0.37
CMTM3-209ENST00000565003 USP17L4A6NCW7 530 aa12.73□□□□□ -0.37
CMTM3-209ENST00000565003 FOXN1O15353 648 aa12.73□□□□□ -0.37
CMTM3-209ENST00000565003 ZNF280AP59817 542 aaPredicted RBP12.73□□□□□ -0.37
CMTM3-209ENST00000565003 CHRNDQ07001 517 aa12.73□□□□□ -0.37
CMTM3-209ENST00000565003 SLFN5Q08AF3 891 aa12.73□□□□□ -0.37
CMTM3-209ENST00000565003 USP17L1Q7RTZ2 530 aa12.73□□□□□ -0.37
CMTM3-209ENST00000565003 PODNQ7Z5L7 613 aa12.73□□□□□ -0.37
CMTM3-209ENST00000565003 SAPCD2Q86UD0 394 aa12.73□□□□□ -0.37
CMTM3-209ENST00000565003 USP48Q86UV5 1035 aa12.73□□□□□ -0.37
CMTM3-209ENST00000565003 MRPL50Q8N5N7 158 aaKnown RBP12.73□□□□□ -0.37
CMTM3-209ENST00000565003 AGBL3Q8NEM8 1001 aa12.73□□□□□ -0.37
CMTM3-209ENST00000565003 CAPNS2Q96L46 248 aa12.73□□□□□ -0.37
CMTM3-209ENST00000565003 GMLQ99445 158 aa12.73□□□□□ -0.37
CMTM3-209ENST00000565003 ZNF408Q9H9D4 720 aa12.73□□□□□ -0.37
CMTM3-209ENST00000565003 CHMP3Q9Y3E7 222 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms