RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 SMARCE1Q969G3 411 aa19.11■□□□□ 0.65
LINC00554-201ENST00000564841 PI4KAP2A4QPH2 592 aa19.1■□□□□ 0.65
LINC00554-201ENST00000564841 PI4KAP1Q8N8J0 262 aa19.1■□□□□ 0.65
LINC00554-201ENST00000564841 SOS1Q07889 1333 aaPredicted RBP19.1■□□□□ 0.65
LINC00554-201ENST00000564841 TNNT3P45378 269 aaPredicted RBP19.1■□□□□ 0.65
LINC00554-201ENST00000564841 IQCB1Q15051 598 aa19.1■□□□□ 0.65
LINC00554-201ENST00000564841 AMOTQ4VCS5 1084 aa19.1■□□□□ 0.65
LINC00554-201ENST00000564841 PA2G4Q9UQ80 394 aaKnown RBP19.1■□□□□ 0.65
LINC00554-201ENST00000564841 GNAI3P08754 354 aa19.09■□□□□ 0.65
LINC00554-201ENST00000564841 FOSBP53539 338 aa19.09■□□□□ 0.65
LINC00554-201ENST00000564841 PROSER3Q2NL68 480 aa19.09■□□□□ 0.65
LINC00554-201ENST00000564841 TATP17735 454 aaPredicted RBP19.09■□□□□ 0.65
LINC00554-201ENST00000564841 IRX3P78415 501 aaPredicted RBP19.09■□□□□ 0.65
LINC00554-201ENST00000564841 SLAIN2Q9P270 581 aa19.09■□□□□ 0.65
LINC00554-201ENST00000564841 TAF6LQ9Y6J9 622 aa19.09■□□□□ 0.65
LINC00554-201ENST00000564841 FTOQ9C0B1 505 aaKnown RBP eCLIP19.09■□□□□ 0.65
LINC00554-201ENST00000564841 MYL6BP14649 208 aa19.08■□□□□ 0.65
LINC00554-201ENST00000564841 PPFIA3O75145 1194 aa19.07■□□□□ 0.64
LINC00554-201ENST00000564841 SNW1Q13573 536 aaKnown RBP19.07■□□□□ 0.64
LINC00554-201ENST00000564841 E4F1Q66K89 784 aaPredicted RBP19.07■□□□□ 0.64
LINC00554-201ENST00000564841 TOM1L2Q6ZVM7 507 aa19.07■□□□□ 0.64
LINC00554-201ENST00000564841 CYP46A1Q9Y6A2 500 aa19.07■□□□□ 0.64
LINC00554-201ENST00000564841 CCDC34Q96HJ3 373 aa19.07■□□□□ 0.64
LINC00554-201ENST00000564841 SLFNL1Q499Z3 407 aa19.06■□□□□ 0.64
LINC00554-201ENST00000564841 STRCP1A6NGW2 1772 aa19.06■□□□□ 0.64
LINC00554-201ENST00000564841 DDX19AQ9NUU7 478 aaKnown RBP19.06■□□□□ 0.64
LINC00554-201ENST00000564841 CCDC9Q9Y3X0 531 aaKnown RBP19.06■□□□□ 0.64
LINC00554-201ENST00000564841 RHPN1Q8TCX5 695 aa19.06■□□□□ 0.64
LINC00554-201ENST00000564841 BECN2A8MW95 431 aa19.05■□□□□ 0.64
LINC00554-201ENST00000564841 RBM43Q6ZSC3 357 aaKnown RBP19.05■□□□□ 0.64
LINC00554-201ENST00000564841 JAK2O60674 1132 aa19.05■□□□□ 0.64
LINC00554-201ENST00000564841 VPS53Q5VIR6 699 aa19.05■□□□□ 0.64
LINC00554-201ENST00000564841 RGPD5Q99666 1765 aa19.04■□□□□ 0.64
LINC00554-201ENST00000564841 KAT6BQ8WYB5 2073 aa19.04■□□□□ 0.64
LINC00554-201ENST00000564841 RAB11FIP3O75154 756 aa19.04■□□□□ 0.64
LINC00554-201ENST00000564841 SASH3O75995 380 aa19.04■□□□□ 0.64
LINC00554-201ENST00000564841 PTPN21Q16825 1174 aa19.04■□□□□ 0.64
LINC00554-201ENST00000564841 PPP1R13BQ96KQ4 1090 aa19.04■□□□□ 0.64
LINC00554-201ENST00000564841 ZSWIM6Q9HCJ5 1215 aa19.04■□□□□ 0.64
LINC00554-201ENST00000564841 SPATA31A3Q5VYP0 1347 aa19.04■□□□□ 0.64
LINC00554-201ENST00000564841 CEMIPQ8WUJ3 1361 aa19.04■□□□□ 0.64
LINC00554-201ENST00000564841 SIL1Q9H173 461 aa19.03■□□□□ 0.64
LINC00554-201ENST00000564841 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.03■□□□□ 0.64
LINC00554-201ENST00000564841 CWF19L2Q2TBE0 894 aaKnown RBP19.03■□□□□ 0.64
LINC00554-201ENST00000564841 ELP1O95163 1332 aa19.03■□□□□ 0.64
LINC00554-201ENST00000564841 FANCGO15287 622 aa19.03■□□□□ 0.64
LINC00554-201ENST00000564841 AOPEPQ8N6M6 819 aa19.03■□□□□ 0.64
LINC00554-201ENST00000564841 CCDC191Q8NCU4 936 aa19.03■□□□□ 0.64
LINC00554-201ENST00000564841 SCAND2PQ9GZW5 306 aaPredicted RBP19.03■□□□□ 0.64
LINC00554-201ENST00000564841 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.03■□□□□ 0.64
LINC00554-201ENST00000564841 ZRANB2O95218 330 aaKnown RBP eCLIP19.02■□□□□ 0.64
LINC00554-201ENST00000564841 NBPF11Q86T75 865 aa19.02■□□□□ 0.64
LINC00554-201ENST00000564841 DHX40Q8IX18 779 aaKnown RBP19.02■□□□□ 0.64
LINC00554-201ENST00000564841 CNTROBQ8N137 903 aa19.02■□□□□ 0.64
LINC00554-201ENST00000564841 MRFAP1L1Q96HT8 127 aa19.02■□□□□ 0.64
LINC00554-201ENST00000564841 CDC25BP30305 580 aa19.02■□□□□ 0.63
LINC00554-201ENST00000564841 TMCO3Q6UWJ1 677 aa19.02■□□□□ 0.63
LINC00554-201ENST00000564841 FAM177A1Q8N128 213 aaPredicted RBP19.02■□□□□ 0.63
LINC00554-201ENST00000564841 KLHDC4Q8TBB5 520 aa19.02■□□□□ 0.63
LINC00554-201ENST00000564841 L2HGDHQ9H9P8 463 aa19.02■□□□□ 0.63
LINC00554-201ENST00000564841 DNAI1Q9UI46 699 aa19.02■□□□□ 0.63
LINC00554-201ENST00000564841 MYO1CO00159 1063 aa19.01■□□□□ 0.63
LINC00554-201ENST00000564841 GIGYF1O75420 1035 aaPredicted RBP19.01■□□□□ 0.63
LINC00554-201ENST00000564841 OAS2P29728 719 aaKnown RBP19.01■□□□□ 0.63
LINC00554-201ENST00000564841 EVA1CP58658 441 aa19.01■□□□□ 0.63
LINC00554-201ENST00000564841 HOMER1Q86YM7 354 aa19.01■□□□□ 0.63
LINC00554-201ENST00000564841 FMNL2Q96PY5 1086 aa19.01■□□□□ 0.63
LINC00554-201ENST00000564841 SH2B1Q9NRF2 756 aaPredicted RBP19.01■□□□□ 0.63
LINC00554-201ENST00000564841 CCDC93Q567U6 631 aa19.01■□□□□ 0.63
LINC00554-201ENST00000564841 MAP3K2Q9Y2U5 619 aa19.01■□□□□ 0.63
LINC00554-201ENST00000564841 MED1Q15648 1581 aaPredicted RBP19.01■□□□□ 0.63
LINC00554-201ENST00000564841 TUBGCP6Q96RT7 1819 aa19.01■□□□□ 0.63
LINC00554-201ENST00000564841 ZSCAN26Q16670 478 aa19■□□□□ 0.63
LINC00554-201ENST00000564841 DNAAF4Q8WXU2 420 aa19■□□□□ 0.63
LINC00554-201ENST00000564841 ZSCAN31Q96LW9 406 aaPredicted RBP19■□□□□ 0.63
LINC00554-201ENST00000564841 RASSF4Q9H2L5 321 aa19■□□□□ 0.63
LINC00554-201ENST00000564841 GOLPH3LQ9H4A5 285 aa19■□□□□ 0.63
LINC00554-201ENST00000564841 NDUFB9Q9Y6M9 179 aa19■□□□□ 0.63
LINC00554-201ENST00000564841 A0A0G2JS52 829 aa19■□□□□ 0.63
LINC00554-201ENST00000564841 CYP27B1O15528 508 aa19■□□□□ 0.63
LINC00554-201ENST00000564841 ARMCX5Q6P1M9 558 aa19■□□□□ 0.63
LINC00554-201ENST00000564841 UBXN4Q92575 508 aa19■□□□□ 0.63
LINC00554-201ENST00000564841 FAM227BQ96M60 508 aa19■□□□□ 0.63
LINC00554-201ENST00000564841 PHKG2P15735 406 aa19■□□□□ 0.63
LINC00554-201ENST00000564841 CCDC8Q9H0W5 538 aaPredicted RBP19■□□□□ 0.63
LINC00554-201ENST00000564841 ORC3Q9UBD5 711 aaPredicted RBP19■□□□□ 0.63
LINC00554-201ENST00000564841 GOLGA8FQ08AF8 430 aa18.99■□□□□ 0.63
LINC00554-201ENST00000564841 GOLGA8DPQ0D2H9 430 aa18.99■□□□□ 0.63
LINC00554-201ENST00000564841 SARM1Q6SZW1 724 aa18.99■□□□□ 0.63
LINC00554-201ENST00000564841 RBM8AQ9Y5S9 174 aaKnown RBP18.99■□□□□ 0.63
LINC00554-201ENST00000564841 TMC6Q7Z403 805 aa18.99■□□□□ 0.63
LINC00554-201ENST00000564841 CARD6Q9BX69 1037 aa18.99■□□□□ 0.63
LINC00554-201ENST00000564841 ZNF330Q9Y3S2 320 aaPredicted RBP18.99■□□□□ 0.63
LINC00554-201ENST00000564841 TEX35Q5T0J7 233 aa18.98■□□□□ 0.63
LINC00554-201ENST00000564841 ZNF790Q6PG37 636 aa18.98■□□□□ 0.63
LINC00554-201ENST00000564841 IFNL2Q8IZJ0 200 aa18.98■□□□□ 0.63
LINC00554-201ENST00000564841 ZNF496Q96IT1 587 aaPredicted RBP18.98■□□□□ 0.63
LINC00554-201ENST00000564841 C9orf78Q9NZ63 289 aaPredicted RBP18.98■□□□□ 0.63
LINC00554-201ENST00000564841 DBF4Q9UBU7 674 aaPredicted RBP18.98■□□□□ 0.63
LINC00554-201ENST00000564841 TNS3Q68CZ2 1445 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms