RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ECE2O60344 883 aa23.77■■□□□ 1.4
CLN6-204ENST00000564752 MAP2K1Q02750 393 aaPredicted RBP23.77■■□□□ 1.4
CLN6-204ENST00000564752 DOK7Q18PE1 504 aa23.77■■□□□ 1.4
CLN6-204ENST00000564752 PI4KAP1Q8N8J0 262 aa23.77■■□□□ 1.4
CLN6-204ENST00000564752 KCNQ5Q9NR82 932 aa23.77■■□□□ 1.4
CLN6-204ENST00000564752 CELF2O95319 508 aaKnown RBP23.76■■□□□ 1.39
CLN6-204ENST00000564752 ECE1P42892 770 aa23.76■■□□□ 1.39
CLN6-204ENST00000564752 NCBP3Q53F19 620 aaKnown RBP23.76■■□□□ 1.39
CLN6-204ENST00000564752 CAPNS2Q96L46 248 aa23.76■■□□□ 1.39
CLN6-204ENST00000564752 GPR101Q96P66 508 aaPredicted RBP23.76■■□□□ 1.39
CLN6-204ENST00000564752 ZC3H12CQ9C0D7 883 aaKnown RBP23.76■■□□□ 1.39
CLN6-204ENST00000564752 IGKV5-2P06315 115 aa23.75■■□□□ 1.39
CLN6-204ENST00000564752 CYP4F22Q6NT55 531 aa23.75■■□□□ 1.39
CLN6-204ENST00000564752 CDC37L1Q7L3B6 337 aa23.75■■□□□ 1.39
CLN6-204ENST00000564752 STK31Q9BXU1 1019 aa23.75■■□□□ 1.39
CLN6-204ENST00000564752 ANKIB1Q9P2G1 1089 aa23.75■■□□□ 1.39
CLN6-204ENST00000564752 TRPM7Q96QT4 1865 aa23.75■■□□□ 1.39
CLN6-204ENST00000564752 RPS12P25398 132 aaKnown RBP23.74■■□□□ 1.39
CLN6-204ENST00000564752 PAXIP1Q6ZW49 1069 aaPredicted RBP23.74■■□□□ 1.39
CLN6-204ENST00000564752 SAPCD2Q86UD0 394 aa23.74■■□□□ 1.39
CLN6-204ENST00000564752 CCDC85AQ96PX6 553 aaPredicted RBP23.74■■□□□ 1.39
CLN6-204ENST00000564752 GGA1Q9UJY5 639 aa23.74■■□□□ 1.39
CLN6-204ENST00000564752 RTL9Q8NET4 1388 aa23.74■■□□□ 1.39
CLN6-204ENST00000564752 UFL1O94874 794 aa23.73■■□□□ 1.39
CLN6-204ENST00000564752 TWISTNBQ3B726 338 aaPredicted RBP23.73■■□□□ 1.39
CLN6-204ENST00000564752 SAMD7Q7Z3H4 446 aa23.73■■□□□ 1.39
CLN6-204ENST00000564752 IL16Q14005 1332 aa23.73■■□□□ 1.39
CLN6-204ENST00000564752 VIL1P09327 827 aaKnown RBP23.72■■□□□ 1.39
CLN6-204ENST00000564752 LBX1P52954 281 aa23.72■■□□□ 1.39
CLN6-204ENST00000564752 ANKRD18AQ8IVF6 992 aa23.72■■□□□ 1.39
CLN6-204ENST00000564752 FAM9BQ8IZU0 186 aa23.72■■□□□ 1.39
CLN6-204ENST00000564752 SLC4A2P04920 1241 aa23.71■■□□□ 1.39
CLN6-204ENST00000564752 NEXNQ0ZGT2 675 aa23.71■■□□□ 1.39
CLN6-204ENST00000564752 TBC1D10BQ4KMP7 808 aaPredicted RBP23.71■■□□□ 1.39
CLN6-204ENST00000564752 G2E3Q7L622 706 aa23.71■■□□□ 1.39
CLN6-204ENST00000564752 HHIPL1Q96JK4 782 aa23.71■■□□□ 1.39
CLN6-204ENST00000564752 SALL2Q9Y467 1007 aaPredicted RBP23.71■■□□□ 1.39
CLN6-204ENST00000564752 EGFRP00533 1210 aa23.7■■□□□ 1.38
CLN6-204ENST00000564752 HSPA8P11142 646 aaKnown RBP23.7■■□□□ 1.38
CLN6-204ENST00000564752 CTSWP56202 376 aa23.7■■□□□ 1.38
CLN6-204ENST00000564752 GRM1Q13255 1194 aa23.7■■□□□ 1.38
CLN6-204ENST00000564752 USP48Q86UV5 1035 aa23.7■■□□□ 1.38
CLN6-204ENST00000564752 TTLL11Q8NHH1 800 aa23.7■■□□□ 1.38
CLN6-204ENST00000564752 NEURL1BA8MQ27 555 aa23.69■■□□□ 1.38
CLN6-204ENST00000564752 G3V3G9 751 aa23.69■■□□□ 1.38
CLN6-204ENST00000564752 CWF19L2Q2TBE0 894 aaKnown RBP23.69■■□□□ 1.38
CLN6-204ENST00000564752 DCAF8Q5TAQ9 597 aa23.69■■□□□ 1.38
CLN6-204ENST00000564752 CDC5LQ99459 802 aaKnown RBP23.69■■□□□ 1.38
CLN6-204ENST00000564752 ZNF408Q9H9D4 720 aa23.69■■□□□ 1.38
CLN6-204ENST00000564752 XDHP47989 1333 aa23.68■■□□□ 1.38
CLN6-204ENST00000564752 H7C1W4 665 aa23.68■■□□□ 1.38
CLN6-204ENST00000564752 MAP2K2P36507 400 aa23.68■■□□□ 1.38
CLN6-204ENST00000564752 AOC2O75106 756 aa23.67■■□□□ 1.38
CLN6-204ENST00000564752 ATP2B4P23634 1241 aa23.67■■□□□ 1.38
CLN6-204ENST00000564752 RBM26Q5T8P6 1007 aaKnown RBP23.67■■□□□ 1.38
CLN6-204ENST00000564752 DLK2Q6UY11 383 aa23.67■■□□□ 1.38
CLN6-204ENST00000564752 BSDC1Q9NW68 430 aaPredicted RBP23.67■■□□□ 1.38
CLN6-204ENST00000564752 KRT26Q7Z3Y9 468 aa23.66■■□□□ 1.38
CLN6-204ENST00000564752 WDR63Q8IWG1 891 aa23.66■■□□□ 1.38
CLN6-204ENST00000564752 BEGAINQ9BUH8 593 aa23.66■■□□□ 1.38
CLN6-204ENST00000564752 GREM2Q9H772 168 aa23.66■■□□□ 1.38
CLN6-204ENST00000564752 FANCIQ9NVI1 1328 aa23.65■■□□□ 1.38
CLN6-204ENST00000564752 FLIIQ13045 1269 aa23.65■■□□□ 1.38
CLN6-204ENST00000564752 AGBL3Q8NEM8 1001 aa23.65■■□□□ 1.38
CLN6-204ENST00000564752 DCPSQ96C86 337 aaKnown RBP23.65■■□□□ 1.38
CLN6-204ENST00000564752 MINPP1Q9UNW1 487 aa23.65■■□□□ 1.38
CLN6-204ENST00000564752 THSD7BQ9C0I4 1608 aa23.65■■□□□ 1.38
CLN6-204ENST00000564752 WTIPA6NIX2 430 aaPredicted RBP23.64■■□□□ 1.37
CLN6-204ENST00000564752 VAMP4O75379 141 aa23.64■■□□□ 1.37
CLN6-204ENST00000564752 GCKRQ14397 625 aa23.64■■□□□ 1.37
CLN6-204ENST00000564752 KIF4BQ2VIQ3 1234 aa23.64■■□□□ 1.37
CLN6-204ENST00000564752 RSBN1LQ6PCB5 846 aaPredicted RBP23.64■■□□□ 1.37
CLN6-204ENST00000564752 UBE3BQ7Z3V4 1068 aa23.64■■□□□ 1.37
CLN6-204ENST00000564752 PODNQ7Z5L7 613 aa23.63■■□□□ 1.37
CLN6-204ENST00000564752 PLA2G12BQ9BX93 195 aa23.63■■□□□ 1.37
CLN6-204ENST00000564752 ZNF280AP59817 542 aaPredicted RBP23.62■■□□□ 1.37
CLN6-204ENST00000564752 GMLQ99445 158 aa23.62■■□□□ 1.37
CLN6-204ENST00000564752 ADM5C9JUS6 153 aa23.61■■□□□ 1.37
CLN6-204ENST00000564752 CASP7P55210 303 aa23.61■■□□□ 1.37
CLN6-204ENST00000564752 HUNKP57058 714 aa23.61■■□□□ 1.37
CLN6-204ENST00000564752 FKBP5Q13451 457 aaPredicted RBP23.61■■□□□ 1.37
CLN6-204ENST00000564752 DNAAF4Q8WXU2 420 aa23.61■■□□□ 1.37
CLN6-204ENST00000564752 SCN9AQ15858 1988 aa23.61■■□□□ 1.37
CLN6-204ENST00000564752 ZNF609O15014 1411 aa23.6■■□□□ 1.37
CLN6-204ENST00000564752 USP17L3A6NCW0 530 aa23.6■■□□□ 1.37
CLN6-204ENST00000564752 USP17L4A6NCW7 530 aa23.6■■□□□ 1.37
CLN6-204ENST00000564752 USP17L1Q7RTZ2 530 aa23.6■■□□□ 1.37
CLN6-204ENST00000564752 LINS1Q8NG48 757 aa23.6■■□□□ 1.37
CLN6-204ENST00000564752 CSF1RP07333 972 aa23.59■■□□□ 1.37
CLN6-204ENST00000564752 IGHMBP2P38935 993 aaKnown RBP23.59■■□□□ 1.37
CLN6-204ENST00000564752 CCT4P50991 539 aaKnown RBP23.59■■□□□ 1.37
CLN6-204ENST00000564752 BRPF1P55201 1214 aaPredicted RBP23.59■■□□□ 1.37
CLN6-204ENST00000564752 EXOSC9Q06265 439 aaKnown RBP23.59■■□□□ 1.37
CLN6-204ENST00000564752 MYH16Q9H6N6 1097 aa23.59■■□□□ 1.37
CLN6-204ENST00000564752 GBA2Q9HCG7 927 aaPredicted RBP23.59■■□□□ 1.37
CLN6-204ENST00000564752 GGA3Q9NZ52 723 aa23.59■■□□□ 1.37
CLN6-204ENST00000564752 MED23Q9ULK4 1368 aa23.59■■□□□ 1.37
CLN6-204ENST00000564752 CACNA1FO60840 1977 aa23.59■■□□□ 1.37
CLN6-204ENST00000564752 ASTN2O75129 1339 aaPredicted RBP23.59■■□□□ 1.37
CLN6-204ENST00000564752 USP17L8P0C7I0 530 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms