RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 G3V3G9 751 aa19.95■□□□□ 0.78
RAB40C-208ENST00000564703 ZBTB7BO15156 539 aaPredicted RBP19.95■□□□□ 0.78
RAB40C-208ENST00000564703 PPIP5K2O43314 1243 aa19.95■□□□□ 0.78
RAB40C-208ENST00000564703 ATP2B4P23634 1241 aa19.95■□□□□ 0.78
RAB40C-208ENST00000564703 WASHC4Q2M389 1173 aa19.95■□□□□ 0.78
RAB40C-208ENST00000564703 DCAF8Q5TAQ9 597 aa19.95■□□□□ 0.78
RAB40C-208ENST00000564703 DPY19L2Q6NUT2 758 aa19.95■□□□□ 0.78
RAB40C-208ENST00000564703 ZNF594Q96JF6 807 aaPredicted RBP19.95■□□□□ 0.78
RAB40C-208ENST00000564703 ZC3H12CQ9C0D7 883 aaKnown RBP19.95■□□□□ 0.78
RAB40C-208ENST00000564703 PODXL2Q9NZ53 605 aa19.95■□□□□ 0.78
RAB40C-208ENST00000564703 DDX19BQ9UMR2 479 aa19.95■□□□□ 0.78
RAB40C-208ENST00000564703 COG6Q9Y2V7 657 aa19.95■□□□□ 0.78
RAB40C-208ENST00000564703 XDHP47989 1333 aa19.95■□□□□ 0.78
RAB40C-208ENST00000564703 SBF1O95248 1867 aa19.94■□□□□ 0.78
RAB40C-208ENST00000564703 MVPQ14764 893 aaKnown RBP19.94■□□□□ 0.78
RAB40C-208ENST00000564703 UFL1O94874 794 aa19.93■□□□□ 0.78
RAB40C-208ENST00000564703 KCNJ4P48050 445 aa19.93■□□□□ 0.78
RAB40C-208ENST00000564703 PRELPP51888 382 aa19.93■□□□□ 0.78
RAB40C-208ENST00000564703 SLC51AQ86UW1 340 aa19.93■□□□□ 0.78
RAB40C-208ENST00000564703 TBC1D16Q8TBP0 767 aa19.93■□□□□ 0.78
RAB40C-208ENST00000564703 POLLQ9UGP5 575 aa19.93■□□□□ 0.78
RAB40C-208ENST00000564703 ZC3H4Q9UPT8 1303 aaKnown RBP19.93■□□□□ 0.78
RAB40C-208ENST00000564703 CHRNDQ07001 517 aa19.92■□□□□ 0.78
RAB40C-208ENST00000564703 AOC3Q16853 763 aa19.92■□□□□ 0.78
RAB40C-208ENST00000564703 NIM1KQ8IY84 436 aa19.92■□□□□ 0.78
RAB40C-208ENST00000564703 LEMD3Q9Y2U8 911 aa19.92■□□□□ 0.78
RAB40C-208ENST00000564703 RIMBP2O15034 1052 aa19.91■□□□□ 0.78
RAB40C-208ENST00000564703 SRGAP3O43295 1099 aa19.91■□□□□ 0.78
RAB40C-208ENST00000564703 GOLGB1Q14789 3259 aaKnown RBP19.91■□□□□ 0.78
RAB40C-208ENST00000564703 RRP1P56182 461 aaKnown RBP19.9■□□□□ 0.78
RAB40C-208ENST00000564703 EIF6P56537 245 aaKnown RBP19.9■□□□□ 0.78
RAB40C-208ENST00000564703 KIAA2012Q0VF49 1180 aa19.9■□□□□ 0.78
RAB40C-208ENST00000564703 HELBQ8NG08 1087 aaPredicted RBP19.9■□□□□ 0.78
RAB40C-208ENST00000564703 C20orf194Q5TEA3 1177 aa19.89■□□□□ 0.77
RAB40C-208ENST00000564703 MROH5Q6ZUA9 1318 aa19.89■□□□□ 0.77
RAB40C-208ENST00000564703 KDM2BQ8NHM5 1336 aa19.89■□□□□ 0.77
RAB40C-208ENST00000564703 KLHDC4Q8TBB5 520 aa19.89■□□□□ 0.77
RAB40C-208ENST00000564703 SNED1Q8TER0 1413 aa19.89■□□□□ 0.77
RAB40C-208ENST00000564703 ZNF526Q8TF50 670 aaPredicted RBP19.89■□□□□ 0.77
RAB40C-208ENST00000564703 PUS3Q9BZE2 481 aaKnown RBP19.89■□□□□ 0.77
RAB40C-208ENST00000564703 ZNF804BA4D1E1 1349 aa19.88■□□□□ 0.77
RAB40C-208ENST00000564703 GLTPD2A6NH11 291 aa19.88■□□□□ 0.77
RAB40C-208ENST00000564703 EYA2O00167 538 aa19.88■□□□□ 0.77
RAB40C-208ENST00000564703 TAF5LO75529 589 aa19.88■□□□□ 0.77
RAB40C-208ENST00000564703 ATP8B2P98198 1209 aa19.88■□□□□ 0.77
RAB40C-208ENST00000564703 MTX1Q13505 466 aa19.88■□□□□ 0.77
RAB40C-208ENST00000564703 METTL24Q5JXM2 366 aa19.88■□□□□ 0.77
RAB40C-208ENST00000564703 FBXO3Q9UK99 471 aa19.88■□□□□ 0.77
RAB40C-208ENST00000564703 ZNRF3Q9ULT6 936 aa19.88■□□□□ 0.77
RAB40C-208ENST00000564703 RIPOR2Q9Y4F9 1068 aa19.88■□□□□ 0.77
RAB40C-208ENST00000564703 SPEF2Q9C093 1822 aa19.88■□□□□ 0.77
RAB40C-208ENST00000564703 COL4A1P02462 1669 aa19.87■□□□□ 0.77
RAB40C-208ENST00000564703 DICER1Q9UPY3 1922 aaKnown RBP19.87■□□□□ 0.77
RAB40C-208ENST00000564703 RFX5P48382 616 aaPredicted RBP19.87■□□□□ 0.77
RAB40C-208ENST00000564703 PTPN12Q05209 780 aaKnown RBP19.87■□□□□ 0.77
RAB40C-208ENST00000564703 SIL1Q9H173 461 aa19.87■□□□□ 0.77
RAB40C-208ENST00000564703 C1orf115Q9H7X2 142 aa19.87■□□□□ 0.77
RAB40C-208ENST00000564703 GPBP1L1Q9HC44 474 aaPredicted RBP19.87■□□□□ 0.77
RAB40C-208ENST00000564703 LRRC37AA6NMS7 1700 aa19.87■□□□□ 0.77
RAB40C-208ENST00000564703 FZD9O00144 591 aa19.86■□□□□ 0.77
RAB40C-208ENST00000564703 LRRC24Q50LG9 513 aa19.86■□□□□ 0.77
RAB40C-208ENST00000564703 ZNF784Q8NCA9 323 aaPredicted RBP19.86■□□□□ 0.77
RAB40C-208ENST00000564703 COPRSQ9NQ92 184 aa19.86■□□□□ 0.77
RAB40C-208ENST00000564703 CIAO1O76071 339 aa19.85■□□□□ 0.77
RAB40C-208ENST00000564703 G3BP1Q13283 466 aaKnown RBP eCLIP19.85■□□□□ 0.77
RAB40C-208ENST00000564703 DOK7Q18PE1 504 aa19.85■□□□□ 0.77
RAB40C-208ENST00000564703 GPR101Q96P66 508 aaPredicted RBP19.85■□□□□ 0.77
RAB40C-208ENST00000564703 ZBTB40Q9NUA8 1239 aa19.85■□□□□ 0.77
RAB40C-208ENST00000564703 CEP126Q9P2H0 1117 aa19.85■□□□□ 0.77
RAB40C-208ENST00000564703 IL15P40933 162 aaPredicted RBP19.84■□□□□ 0.77
RAB40C-208ENST00000564703 UBE4AQ14139 1066 aa19.84■□□□□ 0.77
RAB40C-208ENST00000564703 TNIP1Q15025 636 aa19.84■□□□□ 0.77
RAB40C-208ENST00000564703 DBNDD1Q9H9R9 158 aa19.84■□□□□ 0.77
RAB40C-208ENST00000564703 SUPT16HQ9Y5B9 1047 aaKnown RBP19.84■□□□□ 0.77
RAB40C-208ENST00000564703 PNMA6EA0A0J9YXQ4 647 aa19.83■□□□□ 0.77
RAB40C-208ENST00000564703 DDNO94850 711 aaPredicted RBP19.83■□□□□ 0.77
RAB40C-208ENST00000564703 PDE8BO95263 885 aa19.83■□□□□ 0.77
RAB40C-208ENST00000564703 RPAP2Q8IXW5 612 aaPredicted RBP19.83■□□□□ 0.77
RAB40C-208ENST00000564703 PA2G4Q9UQ80 394 aaKnown RBP19.83■□□□□ 0.77
RAB40C-208ENST00000564703 GJA3Q9Y6H8 435 aa19.83■□□□□ 0.77
RAB40C-208ENST00000564703 WTIPA6NIX2 430 aaPredicted RBP19.82■□□□□ 0.76
RAB40C-208ENST00000564703 ECE2O60344 883 aa19.82■□□□□ 0.76
RAB40C-208ENST00000564703 CIAPIN1Q6FI81 312 aa19.82■□□□□ 0.76
RAB40C-208ENST00000564703 GPC2Q8N158 579 aa19.82■□□□□ 0.76
RAB40C-208ENST00000564703 COA1Q9GZY4 146 aa19.82■□□□□ 0.76
RAB40C-208ENST00000564703 HMMRO75330 724 aa19.81■□□□□ 0.76
RAB40C-208ENST00000564703 OS9Q13438 667 aaPredicted RBP19.81■□□□□ 0.76
RAB40C-208ENST00000564703 PODNQ7Z5L7 613 aa19.81■□□□□ 0.76
RAB40C-208ENST00000564703 SSH3Q8TE77 659 aa19.81■□□□□ 0.76
RAB40C-208ENST00000564703 MED23Q9ULK4 1368 aa19.81■□□□□ 0.76
RAB40C-208ENST00000564703 UTRNP46939 3433 aa19.8■□□□□ 0.76
RAB40C-208ENST00000564703 SNAP23O00161 211 aa19.8■□□□□ 0.76
RAB40C-208ENST00000564703 SURF6O75683 361 aaKnown RBP19.8■□□□□ 0.76
RAB40C-208ENST00000564703 RAD17O75943 681 aa19.8■□□□□ 0.76
RAB40C-208ENST00000564703 IFIT1P09914 478 aaKnown RBP19.8■□□□□ 0.76
RAB40C-208ENST00000564703 CXCL9Q07325 125 aa19.8■□□□□ 0.76
RAB40C-208ENST00000564703 POLA2Q14181 598 aa19.8■□□□□ 0.76
RAB40C-208ENST00000564703 CAVIN4Q5BKX8 364 aa19.8■□□□□ 0.76
RAB40C-208ENST00000564703 CEP85Q6P2H3 762 aa19.8■□□□□ 0.76
RAB40C-208ENST00000564703 C15orf52Q6ZUT6 534 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms