RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 CCT4P50991 539 aaKnown RBP12.53□□□□□ -0.4
CDH1-206ENST00000564676 C1QTNF8P60827 252 aa12.53□□□□□ -0.4
CDH1-206ENST00000564676 FOXO4P98177 505 aa12.53□□□□□ -0.4
CDH1-206ENST00000564676 IFIT5Q13325 482 aaKnown RBP12.53□□□□□ -0.4
CDH1-206ENST00000564676 LMBR1LQ6UX01 489 aa12.53□□□□□ -0.4
CDH1-206ENST00000564676 EYA3Q99504 573 aa12.53□□□□□ -0.4
CDH1-206ENST00000564676 MPHOSPH8Q99549 860 aa12.53□□□□□ -0.4
CDH1-206ENST00000564676 KIF16BQ96L93 1317 aa12.53□□□□□ -0.4
CDH1-206ENST00000564676 COL4A1P02462 1669 aa12.52□□□□□ -0.4
CDH1-206ENST00000564676 RIMBP2O15034 1052 aa12.52□□□□□ -0.41
CDH1-206ENST00000564676 BCAR3O75815 825 aa12.52□□□□□ -0.41
CDH1-206ENST00000564676 UFL1O94874 794 aa12.52□□□□□ -0.41
CDH1-206ENST00000564676 KIAA2012Q0VF49 1180 aa12.52□□□□□ -0.41
CDH1-206ENST00000564676 WASHC4Q2M389 1173 aa12.52□□□□□ -0.41
CDH1-206ENST00000564676 TAF7LQ5H9L4 462 aa12.52□□□□□ -0.41
CDH1-206ENST00000564676 EPHA10Q5JZY3 1008 aa12.52□□□□□ -0.41
CDH1-206ENST00000564676 TBC1D16Q8TBP0 767 aa12.52□□□□□ -0.41
CDH1-206ENST00000564676 ARHGAP45Q92619 1136 aa12.52□□□□□ -0.41
CDH1-206ENST00000564676 FRAT1Q92837 279 aaPredicted RBP12.52□□□□□ -0.41
CDH1-206ENST00000564676 SUCLG2Q96I99 432 aa12.52□□□□□ -0.41
CDH1-206ENST00000564676 BSDC1Q9NW68 430 aaPredicted RBP12.52□□□□□ -0.41
CDH1-206ENST00000564676 POLLQ9UGP5 575 aa12.52□□□□□ -0.41
CDH1-206ENST00000564676 GGA1Q9UJY5 639 aa12.52□□□□□ -0.41
CDH1-206ENST00000564676 GJA3Q9Y6H8 435 aa12.52□□□□□ -0.41
CDH1-206ENST00000564676 ZNF541Q9H0D2 1346 aa12.52□□□□□ -0.41
CDH1-206ENST00000564676 TOMM70O94826 608 aa12.51□□□□□ -0.41
CDH1-206ENST00000564676 CCDC57Q2TAC2 916 aa12.51□□□□□ -0.41
CDH1-206ENST00000564676 ZC3H12CQ9C0D7 883 aaKnown RBP12.51□□□□□ -0.41
CDH1-206ENST00000564676 USP44Q9H0E7 712 aa12.51□□□□□ -0.41
CDH1-206ENST00000564676 PODXL2Q9NZ53 605 aa12.51□□□□□ -0.41
CDH1-206ENST00000564676 ZNRF3Q9ULT6 936 aa12.51□□□□□ -0.41
CDH1-206ENST00000564676 MINPP1Q9UNW1 487 aa12.51□□□□□ -0.41
CDH1-206ENST00000564676 UTYO14607 1347 aa12.51□□□□□ -0.41
CDH1-206ENST00000564676 G3V3G9 751 aa12.5□□□□□ -0.41
CDH1-206ENST00000564676 ATP2B4P23634 1241 aa12.5□□□□□ -0.41
CDH1-206ENST00000564676 DCAF8Q5TAQ9 597 aa12.5□□□□□ -0.41
CDH1-206ENST00000564676 GPR101Q96P66 508 aaPredicted RBP12.5□□□□□ -0.41
CDH1-206ENST00000564676 XDHP47989 1333 aa12.5□□□□□ -0.41
CDH1-206ENST00000564676 LRRC37AA6NMS7 1700 aa12.5□□□□□ -0.41
CDH1-206ENST00000564676 COL4A5P29400 1685 aa12.49□□□□□ -0.41
CDH1-206ENST00000564676 IQCA1LA6NCM1 817 aa12.49□□□□□ -0.41
CDH1-206ENST00000564676 POTECB2RU33 542 aa12.49□□□□□ -0.41
CDH1-206ENST00000564676 ZKSCAN2Q63HK3 967 aa12.49□□□□□ -0.41
CDH1-206ENST00000564676 ATF7IPQ6VMQ6 1270 aa12.49□□□□□ -0.41
CDH1-206ENST00000564676 GPC2Q8N158 579 aa12.49□□□□□ -0.41
CDH1-206ENST00000564676 KAZALD1Q96I82 304 aa12.49□□□□□ -0.41
CDH1-206ENST00000564676 ANKRD2Q9GZV1 360 aa12.49□□□□□ -0.41
CDH1-206ENST00000564676 BICC1Q9H694 974 aaKnown RBP12.49□□□□□ -0.41
CDH1-206ENST00000564676 DBNDD1Q9H9R9 158 aa12.49□□□□□ -0.41
CDH1-206ENST00000564676 RAD17O75943 681 aa12.48□□□□□ -0.41
CDH1-206ENST00000564676 UBTFL1P0CB47 393 aaPredicted RBP12.48□□□□□ -0.41
CDH1-206ENST00000564676 TRIM27P14373 513 aa12.48□□□□□ -0.41
CDH1-206ENST00000564676 CXCL9Q07325 125 aa12.48□□□□□ -0.41
CDH1-206ENST00000564676 DOK7Q18PE1 504 aa12.48□□□□□ -0.41
CDH1-206ENST00000564676 CIAPIN1Q6FI81 312 aa12.48□□□□□ -0.41
CDH1-206ENST00000564676 REM2Q8IYK8 340 aaPredicted RBP12.48□□□□□ -0.41
CDH1-206ENST00000564676 RBM46Q8TBY0 533 aaKnown RBP12.48□□□□□ -0.41
CDH1-206ENST00000564676 ZNF594Q96JF6 807 aaPredicted RBP12.48□□□□□ -0.41
CDH1-206ENST00000564676 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
CDH1-206ENST00000564676 HACL1Q9UJ83 578 aa12.48□□□□□ -0.41
CDH1-206ENST00000564676 HDAC5Q9UQL6 1122 aa12.48□□□□□ -0.41
CDH1-206ENST00000564676 SPEF2Q9C093 1822 aa12.48□□□□□ -0.41
CDH1-206ENST00000564676 WDR90Q96KV7 1748 aa12.48□□□□□ -0.41
CDH1-206ENST00000564676 DUOX1Q9NRD9 1551 aa12.47□□□□□ -0.41
CDH1-206ENST00000564676 LMOD1P29536 600 aaPredicted RBP12.47□□□□□ -0.41
CDH1-206ENST00000564676 KCNJ4P48050 445 aa12.47□□□□□ -0.41
CDH1-206ENST00000564676 CHRNDQ07001 517 aa12.47□□□□□ -0.41
CDH1-206ENST00000564676 TNIP1Q15025 636 aa12.47□□□□□ -0.41
CDH1-206ENST00000564676 RABL6Q3YEC7 729 aaPredicted RBP12.47□□□□□ -0.41
CDH1-206ENST00000564676 INTS3Q68E01 1043 aaKnown RBP12.47□□□□□ -0.41
CDH1-206ENST00000564676 LDHAL6AQ6ZMR3 332 aa12.47□□□□□ -0.41
CDH1-206ENST00000564676 ANKRD44Q8N8A2 993 aa12.47□□□□□ -0.41
CDH1-206ENST00000564676 CLUAP1Q96AJ1 413 aa12.47□□□□□ -0.41
CDH1-206ENST00000564676 CNNM1Q9NRU3 951 aa12.47□□□□□ -0.41
CDH1-206ENST00000564676 LEMD3Q9Y2U8 911 aa12.47□□□□□ -0.41
CDH1-206ENST00000564676 YDJCA8MPS7 323 aa12.46□□□□□ -0.41
CDH1-206ENST00000564676 ECE2O60344 883 aa12.46□□□□□ -0.41
CDH1-206ENST00000564676 HELBQ8NG08 1087 aaPredicted RBP12.46□□□□□ -0.41
CDH1-206ENST00000564676 TAF1DQ9H5J8 278 aaPredicted RBP12.46□□□□□ -0.41
CDH1-206ENST00000564676 TNNQ9UQP3 1299 aa12.46□□□□□ -0.41
CDH1-206ENST00000564676 ZNF804BA4D1E1 1349 aa12.45□□□□□ -0.42
CDH1-206ENST00000564676 WTIPA6NIX2 430 aaPredicted RBP12.45□□□□□ -0.42
CDH1-206ENST00000564676 PLIN1O60240 522 aa12.45□□□□□ -0.42
CDH1-206ENST00000564676 TAF5LO75529 589 aa12.45□□□□□ -0.42
CDH1-206ENST00000564676 EPHX2P34913 555 aa12.45□□□□□ -0.42
CDH1-206ENST00000564676 EAPPQ56P03 285 aaPredicted RBP12.45□□□□□ -0.42
CDH1-206ENST00000564676 SMC1BQ8NDV3 1235 aa12.45□□□□□ -0.42
CDH1-206ENST00000564676 MEIS3Q99687 375 aa12.45□□□□□ -0.42
CDH1-206ENST00000564676 LTBP1Q14766 1721 aa12.45□□□□□ -0.42
CDH1-206ENST00000564676 SCN4AP35499 1836 aa12.44□□□□□ -0.42
CDH1-206ENST00000564676 PSMD14O00487 310 aa12.44□□□□□ -0.42
CDH1-206ENST00000564676 GNAI3P08754 354 aa12.44□□□□□ -0.42
CDH1-206ENST00000564676 GMPSP49915 693 aaPredicted RBP12.44□□□□□ -0.42
CDH1-206ENST00000564676 FSTL1Q12841 308 aa12.44□□□□□ -0.42
CDH1-206ENST00000564676 MKRN4PQ13434 485 aaPredicted RBP12.44□□□□□ -0.42
CDH1-206ENST00000564676 FTSJ3Q8IY81 847 aaKnown RBP12.44□□□□□ -0.42
CDH1-206ENST00000564676 CLEC11AQ9Y240 323 aa12.44□□□□□ -0.42
CDH1-206ENST00000564676 LRRFIP2Q9Y608 721 aaKnown RBP12.44□□□□□ -0.42
CDH1-206ENST00000564676 MED23Q9ULK4 1368 aa12.43□□□□□ -0.42
CDH1-206ENST00000564676 EPS15P42566 896 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms