RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 ITGA6P23229 1130 aa17.25■□□□□ 0.35
CNOT1-206ENST00000564557 LMOD1P29536 600 aaPredicted RBP17.25■□□□□ 0.35
CNOT1-206ENST00000564557 ZC3H12CQ9C0D7 883 aaKnown RBP17.25■□□□□ 0.35
CNOT1-206ENST00000564557 GGA1Q9UJY5 639 aa17.25■□□□□ 0.35
CNOT1-206ENST00000564557 ZNRF3Q9ULT6 936 aa17.25■□□□□ 0.35
CNOT1-206ENST00000564557 MYH3P11055 1940 aa17.25■□□□□ 0.35
CNOT1-206ENST00000564557 CASP7P55210 303 aa17.24■□□□□ 0.35
CNOT1-206ENST00000564557 IFIT5Q13325 482 aaKnown RBP17.24■□□□□ 0.35
CNOT1-206ENST00000564557 TAF7LQ5H9L4 462 aa17.24■□□□□ 0.35
CNOT1-206ENST00000564557 SMC1BQ8NDV3 1235 aa17.24■□□□□ 0.35
CNOT1-206ENST00000564557 BSDC1Q9NW68 430 aaPredicted RBP17.24■□□□□ 0.35
CNOT1-206ENST00000564557 HACL1Q9UJ83 578 aa17.24■□□□□ 0.35
CNOT1-206ENST00000564557 RTL9Q8NET4 1388 aa17.24■□□□□ 0.35
CNOT1-206ENST00000564557 UFL1O94874 794 aa17.23■□□□□ 0.35
CNOT1-206ENST00000564557 CSF1RP07333 972 aa17.23■□□□□ 0.35
CNOT1-206ENST00000564557 FSTL1Q12841 308 aa17.23■□□□□ 0.35
CNOT1-206ENST00000564557 CCDC57Q2TAC2 916 aa17.23■□□□□ 0.35
CNOT1-206ENST00000564557 FAM161AQ3B820 660 aa17.23■□□□□ 0.35
CNOT1-206ENST00000564557 TBC1D16Q8TBP0 767 aa17.23■□□□□ 0.35
CNOT1-206ENST00000564557 L3MBTL3Q96JM7 780 aaPredicted RBP17.23■□□□□ 0.35
CNOT1-206ENST00000564557 API5Q9BZZ5 524 aaKnown RBP17.23■□□□□ 0.35
CNOT1-206ENST00000564557 NOB1Q9ULX3 412 aaKnown RBP17.23■□□□□ 0.35
CNOT1-206ENST00000564557 WDR90Q96KV7 1748 aa17.23■□□□□ 0.35
CNOT1-206ENST00000564557 XDHP47989 1333 aa17.22■□□□□ 0.35
CNOT1-206ENST00000564557 ATP2B4P23634 1241 aa17.22■□□□□ 0.35
CNOT1-206ENST00000564557 TNIP1Q15025 636 aa17.22■□□□□ 0.35
CNOT1-206ENST00000564557 CIAPIN1Q6FI81 312 aa17.22■□□□□ 0.35
CNOT1-206ENST00000564557 LMBR1LQ6UX01 489 aa17.22■□□□□ 0.35
CNOT1-206ENST00000564557 PODXL2Q9NZ53 605 aa17.22■□□□□ 0.35
CNOT1-206ENST00000564557 POLLQ9UGP5 575 aa17.22■□□□□ 0.35
CNOT1-206ENST00000564557 POTECB2RU33 542 aa17.21■□□□□ 0.35
CNOT1-206ENST00000564557 IPO8O15397 1037 aaKnown RBP17.21■□□□□ 0.35
CNOT1-206ENST00000564557 HSPA6P17066 643 aa17.21■□□□□ 0.35
CNOT1-206ENST00000564557 CCT4P50991 539 aaKnown RBP17.21■□□□□ 0.35
CNOT1-206ENST00000564557 RARSP54136 660 aaKnown RBP17.21■□□□□ 0.35
CNOT1-206ENST00000564557 EAPPQ56P03 285 aaPredicted RBP17.21■□□□□ 0.35
CNOT1-206ENST00000564557 MINPP1Q9UNW1 487 aa17.21■□□□□ 0.35
CNOT1-206ENST00000564557 CLEC11AQ9Y240 323 aa17.21■□□□□ 0.35
CNOT1-206ENST00000564557 KIF16BQ96L93 1317 aa17.21■□□□□ 0.34
CNOT1-206ENST00000564557 BRPF1P55201 1214 aaPredicted RBP17.2■□□□□ 0.34
CNOT1-206ENST00000564557 FOXO4P98177 505 aa17.2■□□□□ 0.34
CNOT1-206ENST00000564557 CXCL9Q07325 125 aa17.2■□□□□ 0.34
CNOT1-206ENST00000564557 ANKRD2Q9GZV1 360 aa17.2■□□□□ 0.34
CNOT1-206ENST00000564557 TAF1DQ9H5J8 278 aaPredicted RBP17.2■□□□□ 0.34
CNOT1-206ENST00000564557 DBNDD1Q9H9R9 158 aa17.2■□□□□ 0.34
CNOT1-206ENST00000564557 LRRC37AA6NMS7 1700 aa17.2■□□□□ 0.34
CNOT1-206ENST00000564557 ZBED9Q6R2W3 1325 aa17.2■□□□□ 0.34
CNOT1-206ENST00000564557 RAD17O75943 681 aa17.19■□□□□ 0.34
CNOT1-206ENST00000564557 NBPF7P0C2Y1 421 aaPredicted RBP17.19■□□□□ 0.34
CNOT1-206ENST00000564557 EPHX2P34913 555 aa17.19■□□□□ 0.34
CNOT1-206ENST00000564557 KCNJ4P48050 445 aa17.19■□□□□ 0.34
CNOT1-206ENST00000564557 DOK7Q18PE1 504 aa17.19■□□□□ 0.34
CNOT1-206ENST00000564557 PNMA8AQ86V59 439 aaPredicted RBP17.19■□□□□ 0.34
CNOT1-206ENST00000564557 ECE2O60344 883 aa17.18■□□□□ 0.34
CNOT1-206ENST00000564557 FRAT1Q92837 279 aaPredicted RBP17.18■□□□□ 0.34
CNOT1-206ENST00000564557 SUCLG2Q96I99 432 aa17.18■□□□□ 0.34
CNOT1-206ENST00000564557 GPR101Q96P66 508 aaPredicted RBP17.18■□□□□ 0.34
CNOT1-206ENST00000564557 CNNM1Q9NRU3 951 aa17.18■□□□□ 0.34
CNOT1-206ENST00000564557 HDAC5Q9UQL6 1122 aa17.18■□□□□ 0.34
CNOT1-206ENST00000564557 SCN4AP35499 1836 aa17.18■□□□□ 0.34
CNOT1-206ENST00000564557 COL4A1P02462 1669 aa17.17■□□□□ 0.34
CNOT1-206ENST00000564557 COL4A5P29400 1685 aa17.17■□□□□ 0.34
CNOT1-206ENST00000564557 APLP1P51693 650 aa17.17■□□□□ 0.34
CNOT1-206ENST00000564557 EPHA10Q5JZY3 1008 aa17.17■□□□□ 0.34
CNOT1-206ENST00000564557 CHADLQ6NUI6 762 aa17.17■□□□□ 0.34
CNOT1-206ENST00000564557 LDHAL6AQ6ZMR3 332 aa17.17■□□□□ 0.34
CNOT1-206ENST00000564557 LDHDQ86WU2 507 aa17.17■□□□□ 0.34
CNOT1-206ENST00000564557 ARHGAP45Q92619 1136 aa17.17■□□□□ 0.34
CNOT1-206ENST00000564557 LEMD3Q9Y2U8 911 aa17.17■□□□□ 0.34
CNOT1-206ENST00000564557 UTYO14607 1347 aa17.16■□□□□ 0.34
CNOT1-206ENST00000564557 DUOX1Q9NRD9 1551 aa17.15■□□□□ 0.34
CNOT1-206ENST00000564557 SPEF2Q9C093 1822 aa17.15■□□□□ 0.34
CNOT1-206ENST00000564557 UBTFL1P0CB47 393 aaPredicted RBP17.15■□□□□ 0.34
CNOT1-206ENST00000564557 CHRNDQ07001 517 aa17.15■□□□□ 0.34
CNOT1-206ENST00000564557 USP44Q9H0E7 712 aa17.15■□□□□ 0.34
CNOT1-206ENST00000564557 BICC1Q9H694 974 aaKnown RBP17.15■□□□□ 0.34
CNOT1-206ENST00000564557 SPDYE2BA6NHP3 402 aa17.14■□□□□ 0.33
CNOT1-206ENST00000564557 YDJCA8MPS7 323 aa17.14■□□□□ 0.33
CNOT1-206ENST00000564557 H7C1D1 291 aa17.14■□□□□ 0.33
CNOT1-206ENST00000564557 PLIN1O60240 522 aa17.14■□□□□ 0.33
CNOT1-206ENST00000564557 BCAR3O75815 825 aa17.14■□□□□ 0.33
CNOT1-206ENST00000564557 SPDYE6P0CI01 402 aa17.14■□□□□ 0.33
CNOT1-206ENST00000564557 EPS15P42566 896 aa17.14■□□□□ 0.33
CNOT1-206ENST00000564557 GMPSP49915 693 aaPredicted RBP17.14■□□□□ 0.33
CNOT1-206ENST00000564557 SCNN1DP51172 638 aa17.14■□□□□ 0.33
CNOT1-206ENST00000564557 SPDYE2Q495Y8 402 aa17.14■□□□□ 0.33
CNOT1-206ENST00000564557 ZNF594Q96JF6 807 aaPredicted RBP17.14■□□□□ 0.33
CNOT1-206ENST00000564557 GPRC5DQ9NZD1 345 aa17.14■□□□□ 0.33
CNOT1-206ENST00000564557 ZNF804BA4D1E1 1349 aa17.14■□□□□ 0.33
CNOT1-206ENST00000564557 PSMD14O00487 310 aa17.13■□□□□ 0.33
CNOT1-206ENST00000564557 USP50Q70EL3 339 aaPredicted RBP17.13■□□□□ 0.33
CNOT1-206ENST00000564557 PODNQ7Z5L7 613 aa17.13■□□□□ 0.33
CNOT1-206ENST00000564557 ADARB2Q9NS39 739 aaKnown RBP17.13■□□□□ 0.33
CNOT1-206ENST00000564557 MED23Q9ULK4 1368 aa17.13■□□□□ 0.33
CNOT1-206ENST00000564557 POTEIP0CG38 1075 aa17.12■□□□□ 0.33
CNOT1-206ENST00000564557 POTEJP0CG39 1038 aa17.12■□□□□ 0.33
CNOT1-206ENST00000564557 ATF7IPQ6VMQ6 1270 aa17.12■□□□□ 0.33
CNOT1-206ENST00000564557 HELBQ8NG08 1087 aaPredicted RBP17.12■□□□□ 0.33
CNOT1-206ENST00000564557 FBXW7Q969H0 707 aa17.12■□□□□ 0.33
CNOT1-206ENST00000564557 CNOT7Q9UIV1 285 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms