RNA–Protein interactions for RNA: ENST00000564534.1

LINC01858-201, Transcript of long intergenic non-protein coding RNA 1858, humanhuman

TSL 1 (best) BASIC

Gene LINC01858, Length 1,838 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01858-201ENST00000564534 PCDHGA4Q9Y5G9 962 aa11.3□□□□□ -0.6
LINC01858-201ENST00000564534 POLRMTO00411 1230 aaKnown RBP11.3□□□□□ -0.6
LINC01858-201ENST00000564534 SERPINB2P05120 415 aa11.3□□□□□ -0.6
LINC01858-201ENST00000564534 PCCAP05165 728 aaPredicted RBP11.3□□□□□ -0.6
LINC01858-201ENST00000564534 UBTFL1P0CB47 393 aaPredicted RBP11.3□□□□□ -0.6
LINC01858-201ENST00000564534 DDR1Q08345 913 aa11.3□□□□□ -0.6
LINC01858-201ENST00000564534 CNBD1Q8NA66 436 aa11.3□□□□□ -0.6
LINC01858-201ENST00000564534 NTSR2O95665 410 aa11.29□□□□□ -0.6
LINC01858-201ENST00000564534 ST5P78524 1137 aa11.29□□□□□ -0.6
LINC01858-201ENST00000564534 DSG2Q14126 1118 aa11.29□□□□□ -0.6
LINC01858-201ENST00000564534 UBE3BQ7Z3V4 1068 aa11.29□□□□□ -0.6
LINC01858-201ENST00000564534 CRBNQ96SW2 442 aa11.29□□□□□ -0.6
LINC01858-201ENST00000564534 USP44Q9H0E7 712 aa11.29□□□□□ -0.6
LINC01858-201ENST00000564534 UTYO14607 1347 aa11.29□□□□□ -0.6
LINC01858-201ENST00000564534 H7C1W4 665 aa11.28□□□□□ -0.6
LINC01858-201ENST00000564534 ZBTB7BO15156 539 aaPredicted RBP11.28□□□□□ -0.6
LINC01858-201ENST00000564534 IRX6P78412 446 aaPredicted RBP11.28□□□□□ -0.6
LINC01858-201ENST00000564534 RTL5Q5HYW3 569 aaPredicted RBP11.28□□□□□ -0.6
LINC01858-201ENST00000564534 FAM89AQ96GI7 184 aa11.28□□□□□ -0.6
LINC01858-201ENST00000564534 MEIS3Q99687 375 aa11.28□□□□□ -0.6
LINC01858-201ENST00000564534 CDHR2Q9BYE9 1310 aa11.28□□□□□ -0.6
LINC01858-201ENST00000564534 POTEB3A0JP26 581 aa11.28□□□□□ -0.6
LINC01858-201ENST00000564534 IRS4O14654 1257 aaPredicted RBP11.28□□□□□ -0.6
LINC01858-201ENST00000564534 NBPF7P0C2Y1 421 aaPredicted RBP11.28□□□□□ -0.6
LINC01858-201ENST00000564534 AAMPQ13685 434 aa11.28□□□□□ -0.6
LINC01858-201ENST00000564534 POTEBQ6S5H4 581 aa11.28□□□□□ -0.6
LINC01858-201ENST00000564534 NUTM1Q86Y26 1132 aa11.28□□□□□ -0.6
LINC01858-201ENST00000564534 KHSRPQ92945 711 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC01858-201ENST00000564534 TBC1D12O60347 775 aa11.27□□□□□ -0.61
LINC01858-201ENST00000564534 GNAI2P04899 355 aa11.27□□□□□ -0.61
LINC01858-201ENST00000564534 ERFEQ4G0M1 354 aa11.27□□□□□ -0.61
LINC01858-201ENST00000564534 PRR5LQ6MZQ0 368 aa11.27□□□□□ -0.61
LINC01858-201ENST00000564534 CRISPLD2Q9H0B8 497 aa11.27□□□□□ -0.61
LINC01858-201ENST00000564534 SPON1Q9HCB6 807 aa11.27□□□□□ -0.61
LINC01858-201ENST00000564534 NUDT7P0C024 238 aa11.26□□□□□ -0.61
LINC01858-201ENST00000564534 CASP7P55210 303 aa11.26□□□□□ -0.61
LINC01858-201ENST00000564534 JARID2Q92833 1246 aaPredicted RBP11.26□□□□□ -0.61
LINC01858-201ENST00000564534 ZBTB40Q9NUA8 1239 aa11.26□□□□□ -0.61
LINC01858-201ENST00000564534 NRXN2Q9P2S2 1712 aa11.26□□□□□ -0.61
LINC01858-201ENST00000564534 PDE8AO60658 829 aa11.25□□□□□ -0.61
LINC01858-201ENST00000564534 SLC10A5Q5PT55 438 aa11.25□□□□□ -0.61
LINC01858-201ENST00000564534 RIC1Q4ADV7 1423 aa11.25□□□□□ -0.61
LINC01858-201ENST00000564534 PPP1R15BQ5SWA1 713 aa11.25□□□□□ -0.61
LINC01858-201ENST00000564534 SYNE4Q8N205 404 aa11.25□□□□□ -0.61
LINC01858-201ENST00000564534 EXOC6Q8TAG9 804 aa11.25□□□□□ -0.61
LINC01858-201ENST00000564534 SUCLG2Q96I99 432 aa11.25□□□□□ -0.61
LINC01858-201ENST00000564534 NLRP3Q96P20 1036 aa11.25□□□□□ -0.61
LINC01858-201ENST00000564534 PLA2G12BQ9BX93 195 aa11.25□□□□□ -0.61
LINC01858-201ENST00000564534 LRRFIP2Q9Y608 721 aaKnown RBP11.25□□□□□ -0.61
LINC01858-201ENST00000564534 ABCC12Q96J65 1359 aa11.25□□□□□ -0.61
LINC01858-201ENST00000564534 LAMB2P55268 1798 aa11.25□□□□□ -0.61
LINC01858-201ENST00000564534 HCLS1P14317 486 aaPredicted RBP11.24□□□□□ -0.61
LINC01858-201ENST00000564534 BRIP1Q9BX63 1249 aa11.24□□□□□ -0.61
LINC01858-201ENST00000564534 PDE6BP35913 854 aa11.23□□□□□ -0.61
LINC01858-201ENST00000564534 PTGER2P43116 358 aa11.23□□□□□ -0.61
LINC01858-201ENST00000564534 CTSWP56202 376 aa11.23□□□□□ -0.61
LINC01858-201ENST00000564534 CCDC24Q8N4L8 307 aa11.23□□□□□ -0.61
LINC01858-201ENST00000564534 PTCD2Q8WV60 388 aaKnown RBP11.23□□□□□ -0.61
LINC01858-201ENST00000564534 BICC1Q9H694 974 aaKnown RBP11.23□□□□□ -0.61
LINC01858-201ENST00000564534 C1orf115Q9H7X2 142 aa11.23□□□□□ -0.61
LINC01858-201ENST00000564534 DDX60Q8IY21 1712 aaKnown RBP11.23□□□□□ -0.61
LINC01858-201ENST00000564534 CCDC152Q4G0S7 254 aa11.23□□□□□ -0.61
LINC01858-201ENST00000564534 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
LINC01858-201ENST00000564534 PDZRN3Q9UPQ7 1066 aa11.23□□□□□ -0.61
LINC01858-201ENST00000564534 CHMP3Q9Y3E7 222 aa11.23□□□□□ -0.61
LINC01858-201ENST00000564534 C10orf71Q711Q0 1435 aa11.23□□□□□ -0.61
LINC01858-201ENST00000564534 MYH3P11055 1940 aa11.23□□□□□ -0.61
LINC01858-201ENST00000564534 FOXO4P98177 505 aa11.22□□□□□ -0.61
LINC01858-201ENST00000564534 RABL6Q3YEC7 729 aaPredicted RBP11.22□□□□□ -0.61
LINC01858-201ENST00000564534 LMBR1LQ6UX01 489 aa11.22□□□□□ -0.61
LINC01858-201ENST00000564534 ZNF687Q8N1G0 1237 aa11.22□□□□□ -0.61
LINC01858-201ENST00000564534 KAZALD1Q96I82 304 aa11.22□□□□□ -0.61
LINC01858-201ENST00000564534 SF3B3Q15393 1217 aaKnown RBP11.21□□□□□ -0.61
LINC01858-201ENST00000564534 EPHA10Q5JZY3 1008 aa11.21□□□□□ -0.61
LINC01858-201ENST00000564534 ERICH6BQ5W0A0 696 aa11.21□□□□□ -0.61
LINC01858-201ENST00000564534 RPAP2Q8IXW5 612 aaPredicted RBP11.21□□□□□ -0.61
LINC01858-201ENST00000564534 TTLL11Q8NHH1 800 aa11.21□□□□□ -0.61
LINC01858-201ENST00000564534 RPGRQ92834 1020 aaKnown RBP11.21□□□□□ -0.61
LINC01858-201ENST00000564534 DDX27Q96GQ7 796 aaKnown RBP11.21□□□□□ -0.61
LINC01858-201ENST00000564534 LARP6Q9BRS8 491 aaKnown RBP11.21□□□□□ -0.61
LINC01858-201ENST00000564534 SRGAP3O43295 1099 aa11.21□□□□□ -0.62
LINC01858-201ENST00000564534 CSF1RP07333 972 aa11.21□□□□□ -0.62
LINC01858-201ENST00000564534 MTX1Q13505 466 aa11.21□□□□□ -0.62
LINC01858-201ENST00000564534 CEP85Q6P2H3 762 aa11.21□□□□□ -0.62
LINC01858-201ENST00000564534 ANKRD44Q8N8A2 993 aa11.21□□□□□ -0.62
LINC01858-201ENST00000564534 PPP1R1BQ9UD71 204 aaPredicted RBP11.21□□□□□ -0.62
LINC01858-201ENST00000564534 TNRC6CQ9HCJ0 1690 aaKnown RBP11.2□□□□□ -0.62
LINC01858-201ENST00000564534 RTL9Q8NET4 1388 aa11.2□□□□□ -0.62
LINC01858-201ENST00000564534 KLRG2A4D1S0 409 aaPredicted RBP11.2□□□□□ -0.62
LINC01858-201ENST00000564534 H0YIN7 160 aa11.2□□□□□ -0.62
LINC01858-201ENST00000564534 HMMRO75330 724 aa11.2□□□□□ -0.62
LINC01858-201ENST00000564534 IFIT5Q13325 482 aaKnown RBP11.2□□□□□ -0.62
LINC01858-201ENST00000564534 CCDC57Q2TAC2 916 aa11.2□□□□□ -0.62
LINC01858-201ENST00000564534 FAM161AQ3B820 660 aa11.2□□□□□ -0.62
LINC01858-201ENST00000564534 CRY2Q49AN0 593 aa11.2□□□□□ -0.62
LINC01858-201ENST00000564534 DDX46Q7L014 1031 aaKnown RBP11.2□□□□□ -0.62
LINC01858-201ENST00000564534 CCDC85AQ96PX6 553 aaPredicted RBP11.2□□□□□ -0.62
LINC01858-201ENST00000564534 CD2APQ9Y5K6 639 aa11.2□□□□□ -0.62
LINC01858-201ENST00000564534 ANKRD31Q8N7Z5 1873 aa11.2□□□□□ -0.62
LINC01858-201ENST00000564534 ANKRD18BA2A2Z9 1011 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms