RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 PLA2G12BQ9BX93 195 aa25.42■■□□□ 1.66
SHCBP1-203ENST00000564272 GPRC5DQ9NZD1 345 aa25.42■■□□□ 1.66
SHCBP1-203ENST00000564272 PASKQ96RG2 1323 aa25.41■■□□□ 1.66
SHCBP1-203ENST00000564272 DOK7Q18PE1 504 aa25.41■■□□□ 1.66
SHCBP1-203ENST00000564272 GGA1Q9UJY5 639 aa25.41■■□□□ 1.66
SHCBP1-203ENST00000564272 ECE2O60344 883 aa25.4■■□□□ 1.66
SHCBP1-203ENST00000564272 TNIP1Q15025 636 aa25.4■■□□□ 1.66
SHCBP1-203ENST00000564272 FAM161AQ3B820 660 aa25.4■■□□□ 1.66
SHCBP1-203ENST00000564272 CDCA7LQ96GN5 454 aa25.4■■□□□ 1.66
SHCBP1-203ENST00000564272 ITGBL1O95965 494 aaPredicted RBP25.39■■□□□ 1.66
SHCBP1-203ENST00000564272 XDHP47989 1333 aa25.38■■□□□ 1.65
SHCBP1-203ENST00000564272 BCL2L13Q9BXK5 485 aa25.38■■□□□ 1.65
SHCBP1-203ENST00000564272 ZC3H12CQ9C0D7 883 aaKnown RBP25.38■■□□□ 1.65
SHCBP1-203ENST00000564272 PSMD14O00487 310 aa25.37■■□□□ 1.65
SHCBP1-203ENST00000564272 ITGA6P23229 1130 aa25.37■■□□□ 1.65
SHCBP1-203ENST00000564272 SLC4A10Q6U841 1118 aa25.37■■□□□ 1.65
SHCBP1-203ENST00000564272 USP50Q70EL3 339 aaPredicted RBP25.37■■□□□ 1.65
SHCBP1-203ENST00000564272 CNTROBQ8N137 903 aa25.37■■□□□ 1.65
SHCBP1-203ENST00000564272 MRPL50Q8N5N7 158 aaKnown RBP25.37■■□□□ 1.65
SHCBP1-203ENST00000564272 KCNQ5Q9NR82 932 aa25.37■■□□□ 1.65
SHCBP1-203ENST00000564272 ADARB2Q9NS39 739 aaKnown RBP25.37■■□□□ 1.65
SHCBP1-203ENST00000564272 BSDC1Q9NW68 430 aaPredicted RBP25.37■■□□□ 1.65
SHCBP1-203ENST00000564272 SCN9AQ15858 1988 aa25.36■■□□□ 1.65
SHCBP1-203ENST00000564272 SHTN1A0MZ66 631 aa25.36■■□□□ 1.65
SHCBP1-203ENST00000564272 CSF1RP07333 972 aa25.36■■□□□ 1.65
SHCBP1-203ENST00000564272 CREBZFQ9NS37 354 aa25.36■■□□□ 1.65
SHCBP1-203ENST00000564272 MINPP1Q9UNW1 487 aa25.36■■□□□ 1.65
SHCBP1-203ENST00000564272 ZBTB12Q9Y330 459 aaPredicted RBP25.36■■□□□ 1.65
SHCBP1-203ENST00000564272 WTIPA6NIX2 430 aaPredicted RBP25.35■■□□□ 1.65
SHCBP1-203ENST00000564272 IGHMBP2P38935 993 aaKnown RBP25.35■■□□□ 1.65
SHCBP1-203ENST00000564272 ATP2B4P23634 1241 aa25.34■■□□□ 1.65
SHCBP1-203ENST00000564272 FOXO4P98177 505 aa25.34■■□□□ 1.65
SHCBP1-203ENST00000564272 SSH1Q8WYL5 1049 aa25.34■■□□□ 1.65
SHCBP1-203ENST00000564272 GRM8O00222 908 aa25.33■■□□□ 1.65
SHCBP1-203ENST00000564272 ALDH1L1O75891 902 aa25.33■■□□□ 1.65
SHCBP1-203ENST00000564272 MICALL2Q8IY33 904 aa25.33■■□□□ 1.65
SHCBP1-203ENST00000564272 JMYQ8N9B5 988 aa25.33■■□□□ 1.65
SHCBP1-203ENST00000564272 SRCIN1Q9C0H9 1055 aa25.33■■□□□ 1.65
SHCBP1-203ENST00000564272 G3V3G9 751 aa25.32■■□□□ 1.64
SHCBP1-203ENST00000564272 EPHA10Q5JZY3 1008 aa25.32■■□□□ 1.64
SHCBP1-203ENST00000564272 DCAF8Q5TAQ9 597 aa25.32■■□□□ 1.64
SHCBP1-203ENST00000564272 TRPM4Q8TD43 1214 aa25.32■■□□□ 1.64
SHCBP1-203ENST00000564272 CNOT7Q9UIV1 285 aaKnown RBP25.32■■□□□ 1.64
SHCBP1-203ENST00000564272 TRMT2AQ8IZ69 625 aaKnown RBP25.31■■□□□ 1.64
SHCBP1-203ENST00000564272 C9orf78Q9NZ63 289 aaPredicted RBP25.31■■□□□ 1.64
SHCBP1-203ENST00000564272 CHMP3Q9Y3E7 222 aa25.31■■□□□ 1.64
SHCBP1-203ENST00000564272 ANKRD18BA2A2Z9 1011 aa25.3■■□□□ 1.64
SHCBP1-203ENST00000564272 TMEM88BA6NKF7 163 aa25.3■■□□□ 1.64
SHCBP1-203ENST00000564272 CCT4P50991 539 aaKnown RBP25.3■■□□□ 1.64
SHCBP1-203ENST00000564272 HIRAP54198 1017 aaPredicted RBP25.3■■□□□ 1.64
SHCBP1-203ENST00000564272 FMR1Q06787 632 aaKnown RBP eCLIP25.3■■□□□ 1.64
SHCBP1-203ENST00000564272 MPHOSPH8Q99549 860 aa25.3■■□□□ 1.64
SHCBP1-203ENST00000564272 MKRN1Q9UHC7 482 aaKnown RBP25.3■■□□□ 1.64
SHCBP1-203ENST00000564272 MED23Q9ULK4 1368 aa25.3■■□□□ 1.64
SHCBP1-203ENST00000564272 PSME4Q14997 1843 aa25.29■■□□□ 1.64
SHCBP1-203ENST00000564272 LMBR1LQ6UX01 489 aa25.29■■□□□ 1.64
SHCBP1-203ENST00000564272 PTPRCP08575 1304 aa25.29■■□□□ 1.64
SHCBP1-203ENST00000564272 H7C1D1 291 aa25.28■■□□□ 1.64
SHCBP1-203ENST00000564272 DIEXFQ68CQ4 756 aaKnown RBP25.28■■□□□ 1.64
SHCBP1-203ENST00000564272 MIER1Q8N108 512 aa25.28■■□□□ 1.64
SHCBP1-203ENST00000564272 DPF2Q92785 391 aa25.28■■□□□ 1.64
SHCBP1-203ENST00000564272 A0A1B0GUL6 1792 aa25.27■■□□□ 1.64
SHCBP1-203ENST00000564272 TRAF5O00463 557 aa25.27■■□□□ 1.64
SHCBP1-203ENST00000564272 VIL1P09327 827 aaKnown RBP25.27■■□□□ 1.64
SHCBP1-203ENST00000564272 RPS12P25398 132 aaKnown RBP25.27■■□□□ 1.64
SHCBP1-203ENST00000564272 IFIT5Q13325 482 aaKnown RBP25.27■■□□□ 1.64
SHCBP1-203ENST00000564272 SUCLG2Q96I99 432 aa25.27■■□□□ 1.64
SHCBP1-203ENST00000564272 EGFRP00533 1210 aa25.26■■□□□ 1.63
SHCBP1-203ENST00000564272 KLRK1P26718 216 aa25.26■■□□□ 1.63
SHCBP1-203ENST00000564272 CHRNDQ07001 517 aa25.26■■□□□ 1.63
SHCBP1-203ENST00000564272 ALDH1L2Q3SY69 923 aa25.26■■□□□ 1.63
SHCBP1-203ENST00000564272 SAMD7Q7Z3H4 446 aa25.26■■□□□ 1.63
SHCBP1-203ENST00000564272 ANKRD2Q9GZV1 360 aa25.26■■□□□ 1.63
SHCBP1-203ENST00000564272 SMC4Q9NTJ3 1288 aa25.26■■□□□ 1.63
SHCBP1-203ENST00000564272 CNTNAP1P78357 1384 aa25.26■■□□□ 1.63
SHCBP1-203ENST00000564272 NBPF7P0C2Y1 421 aaPredicted RBP25.25■■□□□ 1.63
SHCBP1-203ENST00000564272 TBC1D10BQ4KMP7 808 aaPredicted RBP25.25■■□□□ 1.63
SHCBP1-203ENST00000564272 TXNRD3Q86VQ6 643 aa25.25■■□□□ 1.63
SHCBP1-203ENST00000564272 LEMD3Q9Y2U8 911 aa25.25■■□□□ 1.63
SHCBP1-203ENST00000564272 ZNF804BA4D1E1 1349 aa25.25■■□□□ 1.63
SHCBP1-203ENST00000564272 TRPM7Q96QT4 1865 aa25.24■■□□□ 1.63
SHCBP1-203ENST00000564272 KAZALD1Q96I82 304 aa25.24■■□□□ 1.63
SHCBP1-203ENST00000564272 ZNF594Q96JF6 807 aaPredicted RBP25.24■■□□□ 1.63
SHCBP1-203ENST00000564272 GLIS2Q9BZE0 524 aaPredicted RBP25.24■■□□□ 1.63
SHCBP1-203ENST00000564272 PGAP2Q9UHJ9 254 aa25.24■■□□□ 1.63
SHCBP1-203ENST00000564272 UTYO14607 1347 aa25.23■■□□□ 1.63
SHCBP1-203ENST00000564272 CCDC57Q2TAC2 916 aa25.23■■□□□ 1.63
SHCBP1-203ENST00000564272 RSBN1LQ6PCB5 846 aaPredicted RBP25.23■■□□□ 1.63
SHCBP1-203ENST00000564272 PODNQ7Z5L7 613 aa25.23■■□□□ 1.63
SHCBP1-203ENST00000564272 ZNF646O15015 1829 aaPredicted RBP25.23■■□□□ 1.63
SHCBP1-203ENST00000564272 ZNF609O15014 1411 aa25.22■■□□□ 1.63
SHCBP1-203ENST00000564272 KCNJ4P48050 445 aa25.22■■□□□ 1.63
SHCBP1-203ENST00000564272 TAF7LQ5H9L4 462 aa25.22■■□□□ 1.63
SHCBP1-203ENST00000564272 RBM26Q5T8P6 1007 aaKnown RBP25.22■■□□□ 1.63
SHCBP1-203ENST00000564272 HELBQ8NG08 1087 aaPredicted RBP25.22■■□□□ 1.63
SHCBP1-203ENST00000564272 ZC3H15Q8WU90 426 aaKnown RBP25.22■■□□□ 1.63
SHCBP1-203ENST00000564272 USP17L3A6NCW0 530 aa25.21■■□□□ 1.63
SHCBP1-203ENST00000564272 USP17L4A6NCW7 530 aa25.21■■□□□ 1.63
SHCBP1-203ENST00000564272 SNAP23O00161 211 aa25.21■■□□□ 1.63
SHCBP1-203ENST00000564272 TAF5LO75529 589 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms