RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 NSFL1CQ9UNZ2 370 aaKnown RBP20.84■□□□□ 0.93
RNF40-206ENST00000564260 LEMD3Q9Y2U8 911 aa20.84■□□□□ 0.93
RNF40-206ENST00000564260 OLFM4Q6UX06 510 aa20.83■□□□□ 0.93
RNF40-206ENST00000564260 ANKIB1Q9P2G1 1089 aa20.83■□□□□ 0.93
RNF40-206ENST00000564260 GGA1Q9UJY5 639 aa20.83■□□□□ 0.93
RNF40-206ENST00000564260 MROH5Q6ZUA9 1318 aa20.82■□□□□ 0.92
RNF40-206ENST00000564260 LTBP1Q14766 1721 aa20.82■□□□□ 0.92
RNF40-206ENST00000564260 KIAA2012Q0VF49 1180 aa20.82■□□□□ 0.92
RNF40-206ENST00000564260 JDP2Q8WYK2 163 aa20.82■□□□□ 0.92
RNF40-206ENST00000564260 PLIN1O60240 522 aa20.81■□□□□ 0.92
RNF40-206ENST00000564260 CIAO1O76071 339 aa20.81■□□□□ 0.92
RNF40-206ENST00000564260 YY1P25490 414 aa20.81■□□□□ 0.92
RNF40-206ENST00000564260 GPSM2P81274 684 aa20.81■□□□□ 0.92
RNF40-206ENST00000564260 TBC1D16Q8TBP0 767 aa20.81■□□□□ 0.92
RNF40-206ENST00000564260 COPRSQ9NQ92 184 aa20.81■□□□□ 0.92
RNF40-206ENST00000564260 CNNM1Q9NRU3 951 aa20.81■□□□□ 0.92
RNF40-206ENST00000564260 RFX5P48382 616 aaPredicted RBP20.8■□□□□ 0.92
RNF40-206ENST00000564260 AAMPQ13685 434 aa20.8■□□□□ 0.92
RNF40-206ENST00000564260 ZNF277Q9NRM2 450 aaPredicted RBP20.8■□□□□ 0.92
RNF40-206ENST00000564260 DUOX1Q9NRD9 1551 aa20.8■□□□□ 0.92
RNF40-206ENST00000564260 COL4A1P02462 1669 aa20.8■□□□□ 0.92
RNF40-206ENST00000564260 SRGAP3O43295 1099 aa20.79■□□□□ 0.92
RNF40-206ENST00000564260 PTPN12Q05209 780 aaKnown RBP20.79■□□□□ 0.92
RNF40-206ENST00000564260 CHRNDQ07001 517 aa20.79■□□□□ 0.92
RNF40-206ENST00000564260 WASHC4Q2M389 1173 aa20.79■□□□□ 0.92
RNF40-206ENST00000564260 ZBTB40Q9NUA8 1239 aa20.79■□□□□ 0.92
RNF40-206ENST00000564260 COG6Q9Y2V7 657 aa20.79■□□□□ 0.92
RNF40-206ENST00000564260 RIPOR2Q9Y4F9 1068 aa20.79■□□□□ 0.92
RNF40-206ENST00000564260 MED23Q9ULK4 1368 aa20.79■□□□□ 0.92
RNF40-206ENST00000564260 SBF1O95248 1867 aa20.79■□□□□ 0.92
RNF40-206ENST00000564260 C6orf229H3BNL8 230 aa20.78■□□□□ 0.92
RNF40-206ENST00000564260 PPIP5K2O43314 1243 aa20.78■□□□□ 0.92
RNF40-206ENST00000564260 UFL1O94874 794 aa20.78■□□□□ 0.92
RNF40-206ENST00000564260 PRELPP51888 382 aa20.78■□□□□ 0.92
RNF40-206ENST00000564260 C15orf52Q6ZUT6 534 aaKnown RBP20.78■□□□□ 0.92
RNF40-206ENST00000564260 LARGE2Q8N3Y3 721 aa20.78■□□□□ 0.92
RNF40-206ENST00000564260 ZC3H12CQ9C0D7 883 aaKnown RBP20.78■□□□□ 0.92
RNF40-206ENST00000564260 POLLQ9UGP5 575 aa20.78■□□□□ 0.92
RNF40-206ENST00000564260 TAF1P21675 1872 aa20.77■□□□□ 0.92
RNF40-206ENST00000564260 FZD9O00144 591 aa20.77■□□□□ 0.92
RNF40-206ENST00000564260 EYA2O00167 538 aa20.77■□□□□ 0.92
RNF40-206ENST00000564260 RPAP2Q8IXW5 612 aaPredicted RBP20.77■□□□□ 0.92
RNF40-206ENST00000564260 NIM1KQ8IY84 436 aa20.77■□□□□ 0.92
RNF40-206ENST00000564260 DICER1Q9UPY3 1922 aaKnown RBP20.76■□□□□ 0.91
RNF40-206ENST00000564260 IL15P40933 162 aaPredicted RBP20.76■□□□□ 0.91
RNF40-206ENST00000564260 ATP8B2P98198 1209 aa20.76■□□□□ 0.91
RNF40-206ENST00000564260 UBE4AQ14139 1066 aa20.76■□□□□ 0.91
RNF40-206ENST00000564260 DPY19L2Q6NUT2 758 aa20.76■□□□□ 0.91
RNF40-206ENST00000564260 SSH3Q8TE77 659 aa20.76■□□□□ 0.91
RNF40-206ENST00000564260 ZNF594Q96JF6 807 aaPredicted RBP20.76■□□□□ 0.91
RNF40-206ENST00000564260 ZNF804BA4D1E1 1349 aa20.76■□□□□ 0.91
RNF40-206ENST00000564260 KDM2BQ8NHM5 1336 aa20.76■□□□□ 0.91
RNF40-206ENST00000564260 KCNJ4P48050 445 aa20.75■□□□□ 0.91
RNF40-206ENST00000564260 POLA2Q14181 598 aa20.75■□□□□ 0.91
RNF40-206ENST00000564260 ZNRF3Q9ULT6 936 aa20.75■□□□□ 0.91
RNF40-206ENST00000564260 GLTPD2A6NH11 291 aa20.74■□□□□ 0.91
RNF40-206ENST00000564260 HMMRO75330 724 aa20.74■□□□□ 0.91
RNF40-206ENST00000564260 AOC3Q16853 763 aa20.74■□□□□ 0.91
RNF40-206ENST00000564260 C20orf194Q5TEA3 1177 aa20.74■□□□□ 0.91
RNF40-206ENST00000564260 PDE8BO95263 885 aa20.73■□□□□ 0.91
RNF40-206ENST00000564260 EIF6P56537 245 aaKnown RBP20.73■□□□□ 0.91
RNF40-206ENST00000564260 METTL24Q5JXM2 366 aa20.73■□□□□ 0.91
RNF40-206ENST00000564260 CEP85Q6P2H3 762 aa20.73■□□□□ 0.91
RNF40-206ENST00000564260 PODNQ7Z5L7 613 aa20.73■□□□□ 0.91
RNF40-206ENST00000564260 TIAM2Q8IVF5 1701 aa20.73■□□□□ 0.91
RNF40-206ENST00000564260 VGLL2Q8N8G2 317 aa20.72■□□□□ 0.91
RNF40-206ENST00000564260 COA1Q9GZY4 146 aa20.72■□□□□ 0.91
RNF40-206ENST00000564260 PUM3Q15397 648 aaKnown RBP20.71■□□□□ 0.91
RNF40-206ENST00000564260 LRRC24Q50LG9 513 aa20.71■□□□□ 0.91
RNF40-206ENST00000564260 SLC51AQ86UW1 340 aa20.71■□□□□ 0.91
RNF40-206ENST00000564260 GPC2Q8N158 579 aa20.71■□□□□ 0.91
RNF40-206ENST00000564260 PUS3Q9BZE2 481 aaKnown RBP20.71■□□□□ 0.91
RNF40-206ENST00000564260 CEP126Q9P2H0 1117 aa20.71■□□□□ 0.91
RNF40-206ENST00000564260 NOP58Q9Y2X3 529 aaKnown RBP20.71■□□□□ 0.91
RNF40-206ENST00000564260 PNMA6EA0A0J9YXQ4 647 aa20.7■□□□□ 0.9
RNF40-206ENST00000564260 ZBTB22O15209 634 aa20.7■□□□□ 0.9
RNF40-206ENST00000564260 TNIP1Q15025 636 aa20.7■□□□□ 0.9
RNF40-206ENST00000564260 HSP90AB4PQ58FF6 505 aa20.7■□□□□ 0.9
RNF40-206ENST00000564260 ATG9AQ7Z3C6 839 aa20.7■□□□□ 0.9
RNF40-206ENST00000564260 L3MBTL3Q96JM7 780 aaPredicted RBP20.7■□□□□ 0.9
RNF40-206ENST00000564260 SPEF2Q9C093 1822 aa20.69■□□□□ 0.9
RNF40-206ENST00000564260 G3V3G9 751 aa20.69■□□□□ 0.9
RNF40-206ENST00000564260 DCAF8Q5TAQ9 597 aa20.69■□□□□ 0.9
RNF40-206ENST00000564260 KLHDC4Q8TBB5 520 aa20.69■□□□□ 0.9
RNF40-206ENST00000564260 AKAP2Q9Y2D5 859 aa20.69■□□□□ 0.9
RNF40-206ENST00000564260 ZNF609O15014 1411 aa20.69■□□□□ 0.9
RNF40-206ENST00000564260 TAF5LO75529 589 aa20.68■□□□□ 0.9
RNF40-206ENST00000564260 G3BP1Q13283 466 aaKnown RBP eCLIP20.68■□□□□ 0.97e-7■■□□□ 13.3
RNF40-206ENST00000564260 ZNF804AQ7Z570 1209 aa20.68■□□□□ 0.9
RNF40-206ENST00000564260 LPIN2Q92539 896 aa20.68■□□□□ 0.9
RNF40-206ENST00000564260 C1orf115Q9H7X2 142 aa20.68■□□□□ 0.9
RNF40-206ENST00000564260 IRS2Q9Y4H2 1338 aa20.68■□□□□ 0.9
RNF40-206ENST00000564260 ECE2O60344 883 aa20.67■□□□□ 0.9
RNF40-206ENST00000564260 IFIT1P09914 478 aaKnown RBP20.67■□□□□ 0.9
RNF40-206ENST00000564260 FGFR2P21802 821 aa20.67■□□□□ 0.9
RNF40-206ENST00000564260 MMP14P50281 582 aa20.67■□□□□ 0.9
RNF40-206ENST00000564260 ERC1Q8IUD2 1116 aa20.67■□□□□ 0.9
RNF40-206ENST00000564260 ZNF784Q8NCA9 323 aaPredicted RBP20.67■□□□□ 0.9
RNF40-206ENST00000564260 COL4A5P29400 1685 aa20.67■□□□□ 0.9
RNF40-206ENST00000564260 A0A1B0GUL6 1792 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms