RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 SCNN1DP51172 638 aa18.79■□□□□ 0.6
SNX29-203ENST00000564111 BCL2L13Q9BXK5 485 aa18.79■□□□□ 0.6
SNX29-203ENST00000564111 ANKRD2Q9GZV1 360 aa18.79■□□□□ 0.6
SNX29-203ENST00000564111 SEC31BQ9NQW1 1179 aa18.79■□□□□ 0.6
SNX29-203ENST00000564111 TRPM7Q96QT4 1865 aa18.79■□□□□ 0.6
SNX29-203ENST00000564111 COL4A1P02462 1669 aa18.79■□□□□ 0.6
SNX29-203ENST00000564111 BEND3Q5T5X7 828 aa18.78■□□□□ 0.6
SNX29-203ENST00000564111 DPF2Q92785 391 aa18.78■□□□□ 0.6
SNX29-203ENST00000564111 CASP7P55210 303 aa18.78■□□□□ 0.6
SNX29-203ENST00000564111 MED23Q9ULK4 1368 aa18.78■□□□□ 0.6
SNX29-203ENST00000564111 PASKQ96RG2 1323 aa18.78■□□□□ 0.6
SNX29-203ENST00000564111 CSF1RP07333 972 aa18.77■□□□□ 0.6
SNX29-203ENST00000564111 SRCIN1Q9C0H9 1055 aa18.77■□□□□ 0.6
SNX29-203ENST00000564111 POLLQ9UGP5 575 aa18.77■□□□□ 0.6
SNX29-203ENST00000564111 ECE2O60344 883 aa18.77■□□□□ 0.59
SNX29-203ENST00000564111 GMPSP49915 693 aaPredicted RBP18.77■□□□□ 0.59
SNX29-203ENST00000564111 GREM2Q9H772 168 aa18.77■□□□□ 0.59
SNX29-203ENST00000564111 LEMD3Q9Y2U8 911 aa18.77■□□□□ 0.59
SNX29-203ENST00000564111 A0A1B0GUL6 1792 aa18.77■□□□□ 0.59
SNX29-203ENST00000564111 ANKRD18BA2A2Z9 1011 aa18.76■□□□□ 0.59
SNX29-203ENST00000564111 H7C1D1 291 aa18.76■□□□□ 0.59
SNX29-203ENST00000564111 GRM8O00222 908 aa18.76■□□□□ 0.59
SNX29-203ENST00000564111 ZC3H15Q8WU90 426 aaKnown RBP18.76■□□□□ 0.59
SNX29-203ENST00000564111 MMP14P50281 582 aa18.76■□□□□ 0.59
SNX29-203ENST00000564111 MPHOSPH8Q99549 860 aa18.76■□□□□ 0.59
SNX29-203ENST00000564111 MRPL50Q8N5N7 158 aaKnown RBP18.75■□□□□ 0.59
SNX29-203ENST00000564111 C9orf78Q9NZ63 289 aaPredicted RBP18.75■□□□□ 0.59
SNX29-203ENST00000564111 JARID2Q92833 1246 aaPredicted RBP18.74■□□□□ 0.59
SNX29-203ENST00000564111 RAD17O75943 681 aa18.74■□□□□ 0.59
SNX29-203ENST00000564111 ITGA6P23229 1130 aa18.74■□□□□ 0.59
SNX29-203ENST00000564111 IFIT5Q13325 482 aaKnown RBP18.74■□□□□ 0.59
SNX29-203ENST00000564111 SLC51AQ86UW1 340 aa18.74■□□□□ 0.59
SNX29-203ENST00000564111 TMEM88BA6NKF7 163 aa18.73■□□□□ 0.59
SNX29-203ENST00000564111 YDJCA8MPS7 323 aa18.73■□□□□ 0.59
SNX29-203ENST00000564111 RIMBP2O15034 1052 aa18.73■□□□□ 0.59
SNX29-203ENST00000564111 EPS15P42566 896 aa18.73■□□□□ 0.59
SNX29-203ENST00000564111 PODNQ7Z5L7 613 aa18.73■□□□□ 0.59
SNX29-203ENST00000564111 TRMT2AQ8IZ69 625 aaKnown RBP18.73■□□□□ 0.59
SNX29-203ENST00000564111 CNTROBQ8N137 903 aa18.73■□□□□ 0.59
SNX29-203ENST00000564111 CCDC85AQ96PX6 553 aaPredicted RBP18.73■□□□□ 0.59
SNX29-203ENST00000564111 POTEIP0CG38 1075 aa18.73■□□□□ 0.59
SNX29-203ENST00000564111 POTEJP0CG39 1038 aa18.73■□□□□ 0.59
SNX29-203ENST00000564111 MINPP1Q9UNW1 487 aa18.73■□□□□ 0.59
SNX29-203ENST00000564111 F6X3S4 739 aa18.72■□□□□ 0.59
SNX29-203ENST00000564111 ITGBL1O95965 494 aaPredicted RBP18.72■□□□□ 0.59
SNX29-203ENST00000564111 DBNDD1Q9H9R9 158 aa18.72■□□□□ 0.59
SNX29-203ENST00000564111 CCT4P50991 539 aaKnown RBP18.72■□□□□ 0.59
SNX29-203ENST00000564111 FAM161AQ3B820 660 aa18.72■□□□□ 0.59
SNX29-203ENST00000564111 AGBL3Q8NEM8 1001 aa18.72■□□□□ 0.59
SNX29-203ENST00000564111 HDAC5Q9UQL6 1122 aa18.72■□□□□ 0.59
SNX29-203ENST00000564111 UTYO14607 1347 aa18.71■□□□□ 0.59
SNX29-203ENST00000564111 MYO3BQ8WXR4 1341 aa18.71■□□□□ 0.59
SNX29-203ENST00000564111 PSMD14O00487 310 aa18.71■□□□□ 0.59
SNX29-203ENST00000564111 SLC4A10Q6U841 1118 aa18.71■□□□□ 0.59
SNX29-203ENST00000564111 PGAP2Q9UHJ9 254 aa18.71■□□□□ 0.59
SNX29-203ENST00000564111 VIL1P09327 827 aaKnown RBP18.7■□□□□ 0.58
SNX29-203ENST00000564111 CCDC57Q2TAC2 916 aa18.7■□□□□ 0.58
SNX29-203ENST00000564111 COA1Q9GZY4 146 aa18.7■□□□□ 0.58
SNX29-203ENST00000564111 CNOT7Q9UIV1 285 aaKnown RBP18.7■□□□□ 0.58
SNX29-203ENST00000564111 SCN9AQ15858 1988 aa18.7■□□□□ 0.58
SNX29-203ENST00000564111 CNTNAP1P78357 1384 aa18.7■□□□□ 0.58
SNX29-203ENST00000564111 KCNJ4P48050 445 aa18.7■□□□□ 0.58
SNX29-203ENST00000564111 BRPF1P55201 1214 aaPredicted RBP18.7■□□□□ 0.58
SNX29-203ENST00000564111 FOXO4P98177 505 aa18.7■□□□□ 0.58
SNX29-203ENST00000564111 TAF7LQ5H9L4 462 aa18.7■□□□□ 0.58
SNX29-203ENST00000564111 DOK7Q18PE1 504 aa18.69■□□□□ 0.58
SNX29-203ENST00000564111 MICALL2Q8IY33 904 aa18.69■□□□□ 0.58
SNX29-203ENST00000564111 SMC4Q9NTJ3 1288 aa18.69■□□□□ 0.58
SNX29-203ENST00000564111 MAP1SQ66K74 1059 aaPredicted RBP18.69■□□□□ 0.58
SNX29-203ENST00000564111 C15orf52Q6ZUT6 534 aaKnown RBP18.69■□□□□ 0.58
SNX29-203ENST00000564111 SSH1Q8WYL5 1049 aa18.69■□□□□ 0.58
SNX29-203ENST00000564111 ZNF804BA4D1E1 1349 aa18.68■□□□□ 0.58
SNX29-203ENST00000564111 USP17L3A6NCW0 530 aa18.68■□□□□ 0.58
SNX29-203ENST00000564111 USP17L4A6NCW7 530 aa18.68■□□□□ 0.58
SNX29-203ENST00000564111 DIEXFQ68CQ4 756 aaKnown RBP18.68■□□□□ 0.58
SNX29-203ENST00000564111 RSBN1LQ6PCB5 846 aaPredicted RBP18.68■□□□□ 0.58
SNX29-203ENST00000564111 USP17L1Q7RTZ2 530 aa18.68■□□□□ 0.58
SNX29-203ENST00000564111 API5Q9BZZ5 524 aaKnown RBP18.68■□□□□ 0.58
SNX29-203ENST00000564111 CHMP3Q9Y3E7 222 aa18.68■□□□□ 0.58
SNX29-203ENST00000564111 KIF16BQ96L93 1317 aa18.68■□□□□ 0.58
SNX29-203ENST00000564111 ZNF646O15015 1829 aaPredicted RBP18.68■□□□□ 0.58
SNX29-203ENST00000564111 LMBR1LQ6UX01 489 aa18.66■□□□□ 0.58
SNX29-203ENST00000564111 THSD7BQ9C0I4 1608 aa18.66■□□□□ 0.58
SNX29-203ENST00000564111 CDC37L1Q7L3B6 337 aa18.66■□□□□ 0.58
SNX29-203ENST00000564111 CHRNDQ07001 517 aa18.65■□□□□ 0.58
SNX29-203ENST00000564111 RASSF10A6NK89 507 aa18.65■□□□□ 0.58
SNX29-203ENST00000564111 ZNF280AP59817 542 aaPredicted RBP18.65■□□□□ 0.58
SNX29-203ENST00000564111 GPR101Q96P66 508 aaPredicted RBP18.65■□□□□ 0.58
SNX29-203ENST00000564111 KIF4BQ2VIQ3 1234 aa18.64■□□□□ 0.57
SNX29-203ENST00000564111 STRIP1Q5VSL9 837 aa18.64■□□□□ 0.57
SNX29-203ENST00000564111 ZNF804AQ7Z570 1209 aa18.64■□□□□ 0.57
SNX29-203ENST00000564111 CNNM1Q9NRU3 951 aa18.64■□□□□ 0.57
SNX29-203ENST00000564111 ECE1P42892 770 aa18.64■□□□□ 0.57
SNX29-203ENST00000564111 HTRA3P83110 453 aa18.64■□□□□ 0.57
SNX29-203ENST00000564111 RABL6Q3YEC7 729 aaPredicted RBP18.64■□□□□ 0.57
SNX29-203ENST00000564111 LDHAL6AQ6ZMR3 332 aa18.63■□□□□ 0.57
SNX29-203ENST00000564111 ARHGAP45Q92619 1136 aa18.63■□□□□ 0.57
SNX29-203ENST00000564111 DCPSQ96C86 337 aaKnown RBP18.63■□□□□ 0.57
SNX29-203ENST00000564111 CDCA7LQ96GN5 454 aa18.63■□□□□ 0.57
SNX29-203ENST00000564111 HHIPL1Q96JK4 782 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms