RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 EXOC6Q8TAG9 804 aa21.51■■□□□ 1.03
SPSB3-202ENST00000563668 SRCIN1Q9C0H9 1055 aa21.51■■□□□ 1.03
SPSB3-202ENST00000563668 PODXL2Q9NZ53 605 aa21.51■■□□□ 1.03
SPSB3-202ENST00000563668 ALDH1L1O75891 902 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 RAD17O75943 681 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 ITGA6P23229 1130 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 SCNN1DP51172 638 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 HTRA3P83110 453 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 DOK7Q18PE1 504 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 ALDH1L2Q3SY69 923 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 SMC1BQ8NDV3 1235 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 CDC5LQ99459 802 aaKnown RBP21.5■■□□□ 1.03
SPSB3-202ENST00000563668 DBNDD1Q9H9R9 158 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 KCNQ5Q9NR82 932 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 SMC4Q9NTJ3 1288 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 ANKIB1Q9P2G1 1089 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 HACL1Q9UJ83 578 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 MINPP1Q9UNW1 487 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 SPEF2Q9C093 1822 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 NBPF7P0C2Y1 421 aaPredicted RBP21.5■■□□□ 1.03
SPSB3-202ENST00000563668 KAZALD1Q96I82 304 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 CCDC136Q96JN2 1154 aa21.5■■□□□ 1.03
SPSB3-202ENST00000563668 SCN4AP35499 1836 aa21.49■■□□□ 1.03
SPSB3-202ENST00000563668 PTPRCP08575 1304 aa21.49■■□□□ 1.03
SPSB3-202ENST00000563668 IQCA1LA6NCM1 817 aa21.49■■□□□ 1.03
SPSB3-202ENST00000563668 UFL1O94874 794 aa21.49■■□□□ 1.03
SPSB3-202ENST00000563668 EPHX2P34913 555 aa21.49■■□□□ 1.03
SPSB3-202ENST00000563668 EPS15P42566 896 aa21.49■■□□□ 1.03
SPSB3-202ENST00000563668 BSDC1Q9NW68 430 aaPredicted RBP21.49■■□□□ 1.03
SPSB3-202ENST00000563668 C9orf78Q9NZ63 289 aaPredicted RBP21.49■■□□□ 1.03
SPSB3-202ENST00000563668 PLIN1O60240 522 aa21.48■■□□□ 1.03
SPSB3-202ENST00000563668 LMBR1LQ6UX01 489 aa21.48■■□□□ 1.03
SPSB3-202ENST00000563668 EAPPQ56P03 285 aaPredicted RBP21.47■■□□□ 1.03
SPSB3-202ENST00000563668 SUCLG2Q96I99 432 aa21.47■■□□□ 1.03
SPSB3-202ENST00000563668 GGA1Q9UJY5 639 aa21.47■■□□□ 1.03
SPSB3-202ENST00000563668 NOB1Q9ULX3 412 aaKnown RBP21.47■■□□□ 1.03
SPSB3-202ENST00000563668 RARSP54136 660 aaKnown RBP21.46■■□□□ 1.03
SPSB3-202ENST00000563668 CIAPIN1Q6FI81 312 aa21.46■■□□□ 1.03
SPSB3-202ENST00000563668 XDHP47989 1333 aa21.46■■□□□ 1.03
SPSB3-202ENST00000563668 CT47B1P0C2W7 299 aaPredicted RBP21.45■■□□□ 1.02
SPSB3-202ENST00000563668 GMPSP49915 693 aaPredicted RBP21.45■■□□□ 1.02
SPSB3-202ENST00000563668 CHADLQ6NUI6 762 aa21.45■■□□□ 1.02
SPSB3-202ENST00000563668 CHMP3Q9Y3E7 222 aa21.45■■□□□ 1.02
SPSB3-202ENST00000563668 UTYO14607 1347 aa21.45■■□□□ 1.02
SPSB3-202ENST00000563668 SHTN1A0MZ66 631 aa21.45■■□□□ 1.02
SPSB3-202ENST00000563668 ECE2O60344 883 aa21.45■■□□□ 1.02
SPSB3-202ENST00000563668 ZNF594Q96JF6 807 aaPredicted RBP21.45■■□□□ 1.02
SPSB3-202ENST00000563668 EYA3Q99504 573 aa21.45■■□□□ 1.02
SPSB3-202ENST00000563668 ZC3H12CQ9C0D7 883 aaKnown RBP21.45■■□□□ 1.02
SPSB3-202ENST00000563668 ZBTB12Q9Y330 459 aaPredicted RBP21.45■■□□□ 1.02
SPSB3-202ENST00000563668 IGHMBP2P38935 993 aaKnown RBP21.44■■□□□ 1.02
SPSB3-202ENST00000563668 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.44■■□□□ 1.02
SPSB3-202ENST00000563668 USP44Q9H0E7 712 aa21.44■■□□□ 1.02
SPSB3-202ENST00000563668 ANKRD18BA2A2Z9 1011 aa21.43■■□□□ 1.02
SPSB3-202ENST00000563668 SNAP23O00161 211 aa21.43■■□□□ 1.02
SPSB3-202ENST00000563668 PSMD14O00487 310 aa21.43■■□□□ 1.02
SPSB3-202ENST00000563668 ATP2B4P23634 1241 aa21.43■■□□□ 1.02
SPSB3-202ENST00000563668 APLP1P51693 650 aa21.43■■□□□ 1.02
SPSB3-202ENST00000563668 LDHDQ86WU2 507 aa21.43■■□□□ 1.02
SPSB3-202ENST00000563668 GPRC5DQ9NZD1 345 aa21.43■■□□□ 1.02
SPSB3-202ENST00000563668 ADAMTSL1Q8N6G6 1762 aa21.43■■□□□ 1.02
SPSB3-202ENST00000563668 SCN9AQ15858 1988 aa21.42■■□□□ 1.02
SPSB3-202ENST00000563668 CCT4P50991 539 aaKnown RBP21.42■■□□□ 1.02
SPSB3-202ENST00000563668 BRPF1P55201 1214 aaPredicted RBP21.42■■□□□ 1.02
SPSB3-202ENST00000563668 IFIT5Q13325 482 aaKnown RBP21.42■■□□□ 1.02
SPSB3-202ENST00000563668 TXNRD3Q86VQ6 643 aa21.42■■□□□ 1.02
SPSB3-202ENST00000563668 CRBNQ96SW2 442 aa21.42■■□□□ 1.02
SPSB3-202ENST00000563668 MPHOSPH8Q99549 860 aa21.42■■□□□ 1.02
SPSB3-202ENST00000563668 KLRK1P26718 216 aa21.41■■□□□ 1.02
SPSB3-202ENST00000563668 LMOD1P29536 600 aaPredicted RBP21.41■■□□□ 1.02
SPSB3-202ENST00000563668 DNAJC5GQ8N7S2 189 aa21.41■■□□□ 1.02
SPSB3-202ENST00000563668 HELBQ8NG08 1087 aaPredicted RBP21.41■■□□□ 1.02
SPSB3-202ENST00000563668 BICC1Q9H694 974 aaKnown RBP21.41■■□□□ 1.02
SPSB3-202ENST00000563668 CLEC11AQ9Y240 323 aa21.41■■□□□ 1.02
SPSB3-202ENST00000563668 BCAR3O75815 825 aa21.4■■□□□ 1.02
SPSB3-202ENST00000563668 CHRNDQ07001 517 aa21.4■■□□□ 1.02
SPSB3-202ENST00000563668 TNIP1Q15025 636 aa21.4■■□□□ 1.02
SPSB3-202ENST00000563668 MAP1SQ66K74 1059 aaPredicted RBP21.4■■□□□ 1.02
SPSB3-202ENST00000563668 TAF5LO75529 589 aa21.39■■□□□ 1.02
SPSB3-202ENST00000563668 ITGBL1O95965 494 aaPredicted RBP21.39■■□□□ 1.02
SPSB3-202ENST00000563668 C20orf194Q5TEA3 1177 aa21.39■■□□□ 1.02
SPSB3-202ENST00000563668 PNMA8AQ86V59 439 aaPredicted RBP21.39■■□□□ 1.02
SPSB3-202ENST00000563668 ANKRD44Q8N8A2 993 aa21.39■■□□□ 1.02
SPSB3-202ENST00000563668 TNNQ9UQP3 1299 aa21.39■■□□□ 1.02
SPSB3-202ENST00000563668 HIRAP54198 1017 aaPredicted RBP21.38■■□□□ 1.01
SPSB3-202ENST00000563668 CCDC57Q2TAC2 916 aa21.38■■□□□ 1.01
SPSB3-202ENST00000563668 PUS3Q9BZE2 481 aaKnown RBP21.38■■□□□ 1.01
SPSB3-202ENST00000563668 CNOT7Q9UIV1 285 aaKnown RBP21.38■■□□□ 1.01
SPSB3-202ENST00000563668 FMR1Q06787 632 aaKnown RBP eCLIP21.37■■□□□ 1.01
SPSB3-202ENST00000563668 RABL6Q3YEC7 729 aaPredicted RBP21.37■■□□□ 1.01
SPSB3-202ENST00000563668 TRPM4Q8TD43 1214 aa21.37■■□□□ 1.01
SPSB3-202ENST00000563668 ADARB2Q9NS39 739 aaKnown RBP21.37■■□□□ 1.01
SPSB3-202ENST00000563668 LEMD3Q9Y2U8 911 aa21.37■■□□□ 1.01
SPSB3-202ENST00000563668 ZNF804BA4D1E1 1349 aa21.37■■□□□ 1.01
SPSB3-202ENST00000563668 MED23Q9ULK4 1368 aa21.37■■□□□ 1.01
SPSB3-202ENST00000563668 G3V3G9 751 aa21.36■■□□□ 1.01
SPSB3-202ENST00000563668 EGFRP00533 1210 aa21.36■■□□□ 1.01
SPSB3-202ENST00000563668 DCAF8Q5TAQ9 597 aa21.36■■□□□ 1.01
SPSB3-202ENST00000563668 USP50Q70EL3 339 aaPredicted RBP21.36■■□□□ 1.01
SPSB3-202ENST00000563668 CNTROBQ8N137 903 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms