RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 GOLGA2Q08379 1002 aa24.22■■□□□ 1.47
NME3-204ENST00000563498 FAM161AQ3B820 660 aa24.22■■□□□ 1.47
NME3-204ENST00000563498 DCPSQ96C86 337 aaKnown RBP24.22■■□□□ 1.47
NME3-204ENST00000563498 ZC3H12CQ9C0D7 883 aaKnown RBP24.22■■□□□ 1.47
NME3-204ENST00000563498 RGS19P49795 217 aa24.21■■□□□ 1.47
NME3-204ENST00000563498 DOK7Q18PE1 504 aa24.21■■□□□ 1.47
NME3-204ENST00000563498 RIC3Q7Z5B4 369 aa24.21■■□□□ 1.47
NME3-204ENST00000563498 KCNQ5Q9NR82 932 aa24.21■■□□□ 1.47
NME3-204ENST00000563498 VIL1P09327 827 aaKnown RBP24.2■■□□□ 1.46
NME3-204ENST00000563498 C2orf69Q8N8R5 385 aa24.2■■□□□ 1.46
NME3-204ENST00000563498 GBA2Q9HCG7 927 aaPredicted RBP24.2■■□□□ 1.46
NME3-204ENST00000563498 ZNF609O15014 1411 aa24.19■■□□□ 1.46
NME3-204ENST00000563498 RGMBQ6NW40 437 aa24.19■■□□□ 1.46
NME3-204ENST00000563498 DLK2Q6UY11 383 aa24.19■■□□□ 1.46
NME3-204ENST00000563498 CCDC191Q8NCU4 936 aa24.19■■□□□ 1.46
NME3-204ENST00000563498 MCOLN1Q9GZU1 580 aa24.19■■□□□ 1.46
NME3-204ENST00000563498 IFT57Q9NWB7 429 aa24.19■■□□□ 1.46
NME3-204ENST00000563498 FAM155AB1AL88 458 aaPredicted RBP24.18■■□□□ 1.46
NME3-204ENST00000563498 CALD1Q05682 793 aaKnown RBP24.18■■□□□ 1.46
NME3-204ENST00000563498 KIF4BQ2VIQ3 1234 aa24.18■■□□□ 1.46
NME3-204ENST00000563498 RBM26Q5T8P6 1007 aaKnown RBP24.18■■□□□ 1.46
NME3-204ENST00000563498 CCDC102AQ96A19 550 aa24.18■■□□□ 1.46
NME3-204ENST00000563498 ZIC5Q96T25 663 aa24.18■■□□□ 1.46
NME3-204ENST00000563498 SEC31BQ9NQW1 1179 aa24.18■■□□□ 1.46
NME3-204ENST00000563498 SCN9AQ15858 1988 aa24.17■■□□□ 1.46
NME3-204ENST00000563498 ADM5C9JUS6 153 aa24.17■■□□□ 1.46
NME3-204ENST00000563498 UFL1O94874 794 aa24.17■■□□□ 1.46
NME3-204ENST00000563498 PCCAP05165 728 aaPredicted RBP24.17■■□□□ 1.46
NME3-204ENST00000563498 GNAI1P63096 354 aa24.17■■□□□ 1.46
NME3-204ENST00000563498 MLLT1Q03111 559 aaPredicted RBP24.17■■□□□ 1.46
NME3-204ENST00000563498 CCDC152Q4G0S7 254 aa24.17■■□□□ 1.46
NME3-204ENST00000563498 PHAXQ9H814 394 aaKnown RBP24.17■■□□□ 1.46
NME3-204ENST00000563498 ANKIB1Q9P2G1 1089 aa24.17■■□□□ 1.46
NME3-204ENST00000563498 GGA1Q9UJY5 639 aa24.17■■□□□ 1.46
NME3-204ENST00000563498 SULF1Q8IWU6 871 aa24.16■■□□□ 1.46
NME3-204ENST00000563498 SAGE1Q9NXZ1 904 aa24.16■■□□□ 1.46
NME3-204ENST00000563498 POLR2AP24928 1970 aaKnown RBP24.16■■□□□ 1.46
NME3-204ENST00000563498 CASP8AP2Q9UKL3 1982 aa24.16■■□□□ 1.46
NME3-204ENST00000563498 G3V3G9 751 aa24.15■■□□□ 1.46
NME3-204ENST00000563498 PDE8AO60658 829 aa24.15■■□□□ 1.46
NME3-204ENST00000563498 ZNF280AP59817 542 aaPredicted RBP24.15■■□□□ 1.46
NME3-204ENST00000563498 DCAF8Q5TAQ9 597 aa24.15■■□□□ 1.46
NME3-204ENST00000563498 AGBL3Q8NEM8 1001 aa24.15■■□□□ 1.46
NME3-204ENST00000563498 MYD88Q99836 296 aa24.15■■□□□ 1.46
NME3-204ENST00000563498 CHMP4AQ9BY43 222 aa24.15■■□□□ 1.46
NME3-204ENST00000563498 GGA3Q9NZ52 723 aa24.15■■□□□ 1.46
NME3-204ENST00000563498 CWC25Q9NXE8 425 aaPredicted RBP24.14■■□□□ 1.45
NME3-204ENST00000563498 DGKZQ13574 1117 aa24.13■■□□□ 1.45
NME3-204ENST00000563498 RSBN1LQ6PCB5 846 aaPredicted RBP24.13■■□□□ 1.45
NME3-204ENST00000563498 METTL22Q9BUU2 404 aaPredicted RBP24.13■■□□□ 1.45
NME3-204ENST00000563498 XDHP47989 1333 aa24.12■■□□□ 1.45
NME3-204ENST00000563498 ELL2O00472 640 aaPredicted RBP24.12■■□□□ 1.45
NME3-204ENST00000563498 APAF1O14727 1248 aa24.12■■□□□ 1.45
NME3-204ENST00000563498 DDX58O95786 925 aaKnown RBP24.12■■□□□ 1.45
NME3-204ENST00000563498 ZNF157P51786 506 aaPredicted RBP24.12■■□□□ 1.45
NME3-204ENST00000563498 PSME4Q14997 1843 aa24.12■■□□□ 1.45
NME3-204ENST00000563498 KIF23Q02241 960 aaPredicted RBP24.11■■□□□ 1.45
NME3-204ENST00000563498 PRKRIP1Q9H875 184 aaPredicted RBP24.11■■□□□ 1.45
NME3-204ENST00000563498 CCDC30Q5VVM6 783 aa24.1■■□□□ 1.45
NME3-204ENST00000563498 PODNQ7Z5L7 613 aa24.1■■□□□ 1.45
NME3-204ENST00000563498 ANKRD18AQ8IVF6 992 aa24.1■■□□□ 1.45
NME3-204ENST00000563498 C8orf58Q8NAV2 365 aa24.1■■□□□ 1.45
NME3-204ENST00000563498 CDCA5Q96FF9 252 aa24.1■■□□□ 1.45
NME3-204ENST00000563498 GMLQ99445 158 aa24.1■■□□□ 1.45
NME3-204ENST00000563498 ASTN2O75129 1339 aaPredicted RBP24.1■■□□□ 1.45
NME3-204ENST00000563498 SLC10A3P09131 477 aa24.09■■□□□ 1.45
NME3-204ENST00000563498 ATP2B4P23634 1241 aa24.09■■□□□ 1.45
NME3-204ENST00000563498 ANGEL2Q5VTE6 544 aaKnown RBP24.09■■□□□ 1.45
NME3-204ENST00000563498 PITPNM2Q9BZ72 1349 aa24.09■■□□□ 1.45
NME3-204ENST00000563498 USP17L8P0C7I0 530 aa24.08■■□□□ 1.45
NME3-204ENST00000563498 FKBP1BP68106 108 aa24.08■■□□□ 1.45
NME3-204ENST00000563498 SCARF1Q14162 830 aa24.08■■□□□ 1.45
NME3-204ENST00000563498 REM2Q8IYK8 340 aaPredicted RBP24.08■■□□□ 1.45
NME3-204ENST00000563498 CCDC85AQ96PX6 553 aaPredicted RBP24.08■■□□□ 1.45
NME3-204ENST00000563498 JARID2Q92833 1246 aaPredicted RBP24.07■■□□□ 1.44
NME3-204ENST00000563498 CDC5LQ99459 802 aaKnown RBP24.07■■□□□ 1.44
NME3-204ENST00000563498 RNF186Q9NXI6 227 aa24.07■■□□□ 1.44
NME3-204ENST00000563498 USP17L3A6NCW0 530 aa24.06■■□□□ 1.44
NME3-204ENST00000563498 USP17L4A6NCW7 530 aa24.06■■□□□ 1.44
NME3-204ENST00000563498 SLC34A2O95436 690 aa24.06■■□□□ 1.44
NME3-204ENST00000563498 CTSWP56202 376 aa24.06■■□□□ 1.44
NME3-204ENST00000563498 USP17L1Q7RTZ2 530 aa24.06■■□□□ 1.44
NME3-204ENST00000563498 MYOZ2Q9NPC6 264 aa24.06■■□□□ 1.44
NME3-204ENST00000563498 MAP3K2Q9Y2U5 619 aa24.06■■□□□ 1.44
NME3-204ENST00000563498 TRPA1O75762 1119 aa24.05■■□□□ 1.44
NME3-204ENST00000563498 KSR2Q6VAB6 950 aa24.05■■□□□ 1.44
NME3-204ENST00000563498 CSRNP1Q96S65 589 aa24.05■■□□□ 1.44
NME3-204ENST00000563498 PAPPA2Q9BXP8 1791 aa24.05■■□□□ 1.44
NME3-204ENST00000563498 MED23Q9ULK4 1368 aa24.04■■□□□ 1.44
NME3-204ENST00000563498 AKAP11Q9UKA4 1901 aa24.04■■□□□ 1.44
NME3-204ENST00000563498 BSDC1Q9NW68 430 aaPredicted RBP24.04■■□□□ 1.44
NME3-204ENST00000563498 IGKV5-2P06315 115 aa24.03■■□□□ 1.44
NME3-204ENST00000563498 RASAL3Q86YV0 1011 aa24.03■■□□□ 1.44
NME3-204ENST00000563498 TTLL11Q8NHH1 800 aa24.03■■□□□ 1.44
NME3-204ENST00000563498 PI4KAP2A4QPH2 592 aa24.02■■□□□ 1.44
NME3-204ENST00000563498 PI4KAP1Q8N8J0 262 aa24.02■■□□□ 1.44
NME3-204ENST00000563498 MINPP1Q9UNW1 487 aa24.02■■□□□ 1.44
NME3-204ENST00000563498 NEXNQ0ZGT2 675 aa24.01■■□□□ 1.43
NME3-204ENST00000563498 TSPYL6Q8N831 410 aa24.01■■□□□ 1.43
NME3-204ENST00000563498 MYH3P11055 1940 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms