RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 FNDC3AQ9Y2H6 1198 aaKnown RBP6.81□□□□□ -1.32
HMGB1P33-201ENST00000563485 C9orf172C9J069 976 aa6.8□□□□□ -1.32
HMGB1P33-201ENST00000563485 MPSTP25325 297 aa6.8□□□□□ -1.32
HMGB1P33-201ENST00000563485 MTMR3Q13615 1198 aa6.8□□□□□ -1.32
HMGB1P33-201ENST00000563485 ADGRE1Q14246 886 aa6.8□□□□□ -1.32
HMGB1P33-201ENST00000563485 GDF6Q6KF10 455 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P33-201ENST00000563485 MBTPS1Q14703 1052 aa6.79□□□□□ -1.32
HMGB1P33-201ENST00000563485 TTC39BQ5VTQ0 682 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P33-201ENST00000563485 PHLDB3Q6NSJ2 640 aa6.79□□□□□ -1.32
HMGB1P33-201ENST00000563485 FBXO11Q86XK2 927 aa6.79□□□□□ -1.32
HMGB1P33-201ENST00000563485 DTWD1Q8N5C7 304 aa6.79□□□□□ -1.32
HMGB1P33-201ENST00000563485 EDEM1Q92611 657 aa6.79□□□□□ -1.32
HMGB1P33-201ENST00000563485 LENG1Q96BZ8 264 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P33-201ENST00000563485 RBSNQ9H1K0 784 aa6.79□□□□□ -1.32
HMGB1P33-201ENST00000563485 ABI2Q9NYB9 513 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P33-201ENST00000563485 TRIM33Q9UPN9 1127 aa6.79□□□□□ -1.32
HMGB1P33-201ENST00000563485 DEAF1O75398 565 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P33-201ENST00000563485 CYP2E1P05181 493 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P33-201ENST00000563485 ITGB7P26010 798 aa6.78□□□□□ -1.32
HMGB1P33-201ENST00000563485 EIF1AXP47813 144 aaKnown RBP6.78□□□□□ -1.32
HMGB1P33-201ENST00000563485 ATP11AP98196 1134 aa6.78□□□□□ -1.32
HMGB1P33-201ENST00000563485 DNM1Q05193 864 aaKnown RBP6.78□□□□□ -1.32
HMGB1P33-201ENST00000563485 HYAL2Q12891 473 aa6.78□□□□□ -1.32
HMGB1P33-201ENST00000563485 RSPO4Q2I0M5 234 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P33-201ENST00000563485 NOM1Q5C9Z4 860 aaKnown RBP6.78□□□□□ -1.32
HMGB1P33-201ENST00000563485 IL22RA1Q8N6P7 574 aa6.78□□□□□ -1.32
HMGB1P33-201ENST00000563485 TMEM63CQ9P1W3 806 aa6.78□□□□□ -1.32
HMGB1P33-201ENST00000563485 USP21Q9UK80 565 aa6.78□□□□□ -1.32
HMGB1P33-201ENST00000563485 A6NHS1 94 aa6.77□□□□□ -1.33
HMGB1P33-201ENST00000563485 PDGFAP04085 211 aa6.77□□□□□ -1.33
HMGB1P33-201ENST00000563485 PDE12Q6L8Q7 609 aaKnown RBP6.77□□□□□ -1.33
HMGB1P33-201ENST00000563485 TXNRD3Q86VQ6 643 aa6.77□□□□□ -1.33
HMGB1P33-201ENST00000563485 SEMA6BQ9H3T3 888 aa6.77□□□□□ -1.33
HMGB1P33-201ENST00000563485 ELP3Q9H9T3 547 aa6.77□□□□□ -1.33
HMGB1P33-201ENST00000563485 KIF4AO95239 1232 aa6.76□□□□□ -1.33
HMGB1P33-201ENST00000563485 NRG1Q02297 640 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P33-201ENST00000563485 NKAPLQ5M9Q1 402 aa6.76□□□□□ -1.33
HMGB1P33-201ENST00000563485 ZNF438Q7Z4V0 828 aa6.76□□□□□ -1.33
HMGB1P33-201ENST00000563485 ARID3AQ99856 593 aa6.76□□□□□ -1.33
HMGB1P33-201ENST00000563485 GGNBP2Q9H3C7 697 aa6.76□□□□□ -1.33
HMGB1P33-201ENST00000563485 CNTN3Q9P232 1028 aa6.76□□□□□ -1.33
HMGB1P33-201ENST00000563485 KANSL3Q9P2N6 904 aa6.76□□□□□ -1.33
HMGB1P33-201ENST00000563485 SUPT5HO00267 1087 aaKnown RBP6.75□□□□□ -1.33
HMGB1P33-201ENST00000563485 MZF1P28698 734 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P33-201ENST00000563485 CEP135Q66GS9 1140 aa6.75□□□□□ -1.33
HMGB1P33-201ENST00000563485 ADAMTSL4Q6UY14 1074 aa6.75□□□□□ -1.33
HMGB1P33-201ENST00000563485 SPACA7Q96KW9 195 aa6.75□□□□□ -1.33
HMGB1P33-201ENST00000563485 RASSF4Q9H2L5 321 aa6.75□□□□□ -1.33
HMGB1P33-201ENST00000563485 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P33-201ENST00000563485 DLL1O00548 723 aa6.74□□□□□ -1.33
HMGB1P33-201ENST00000563485 RPLP1P05386 114 aaKnown RBP6.74□□□□□ -1.33
HMGB1P33-201ENST00000563485 PCSK2P16519 638 aa6.74□□□□□ -1.33
HMGB1P33-201ENST00000563485 NPR3P17342 541 aa6.74□□□□□ -1.33
HMGB1P33-201ENST00000563485 ZNF211Q13398 564 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P33-201ENST00000563485 C8orf34Q49A92 452 aa6.74□□□□□ -1.33
HMGB1P33-201ENST00000563485 IGF2-ASQ6U949 168 aa6.74□□□□□ -1.33
HMGB1P33-201ENST00000563485 C1orf127Q8N9H9 656 aa6.74□□□□□ -1.33
HMGB1P33-201ENST00000563485 LACRTQ9GZZ8 138 aa6.74□□□□□ -1.33
HMGB1P33-201ENST00000563485 ANO2Q9NQ90 1003 aa6.74□□□□□ -1.33
HMGB1P33-201ENST00000563485 POLIQ9UNA4 740 aa6.74□□□□□ -1.33
HMGB1P33-201ENST00000563485 USTQ9Y2C2 406 aa6.74□□□□□ -1.33
HMGB1P33-201ENST00000563485 DYRK3O43781 588 aa6.73□□□□□ -1.33
HMGB1P33-201ENST00000563485 ABL1P00519 1130 aa6.73□□□□□ -1.33
HMGB1P33-201ENST00000563485 ALKBH2Q6NS38 261 aa6.73□□□□□ -1.33
HMGB1P33-201ENST00000563485 XKR5Q6UX68 686 aa6.73□□□□□ -1.33
HMGB1P33-201ENST00000563485 NCAPG2Q86XI2 1143 aa6.73□□□□□ -1.33
HMGB1P33-201ENST00000563485 CEP120Q8N960 986 aa6.73□□□□□ -1.33
HMGB1P33-201ENST00000563485 WFDC12Q8WWY7 111 aa6.73□□□□□ -1.33
HMGB1P33-201ENST00000563485 SMNDC1O75940 238 aaKnown RBP eCLIP6.72□□□□□ -1.33
HMGB1P33-201ENST00000563485 FAM13AO94988 1023 aa6.72□□□□□ -1.33
HMGB1P33-201ENST00000563485 ACPPP15309 386 aa6.72□□□□□ -1.33
HMGB1P33-201ENST00000563485 NOS3P29474 1203 aa6.72□□□□□ -1.33
HMGB1P33-201ENST00000563485 IREB2P48200 963 aaKnown RBP6.72□□□□□ -1.33
HMGB1P33-201ENST00000563485 AAMPQ13685 434 aa6.72□□□□□ -1.33
HMGB1P33-201ENST00000563485 SETDB1Q15047 1291 aa6.72□□□□□ -1.33
HMGB1P33-201ENST00000563485 TXNDC11Q6PKC3 985 aa6.72□□□□□ -1.33
HMGB1P33-201ENST00000563485 TTC16Q8NEE8 873 aa6.72□□□□□ -1.33
HMGB1P33-201ENST00000563485 SSBP4Q9BWG4 385 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P33-201ENST00000563485 PBX4Q9BYU1 374 aa6.72□□□□□ -1.33
HMGB1P33-201ENST00000563485 CHRDQ9H2X0 955 aa6.72□□□□□ -1.33
HMGB1P33-201ENST00000563485 MTMR7Q9Y216 660 aa6.72□□□□□ -1.33
HMGB1P33-201ENST00000563485 PPME1Q9Y570 386 aa6.72□□□□□ -1.33
HMGB1P33-201ENST00000563485 LINC01387J3KSC0 135 aa6.71□□□□□ -1.34
HMGB1P33-201ENST00000563485 FZD6O60353 706 aa6.71□□□□□ -1.34
HMGB1P33-201ENST00000563485 CES1P23141 567 aa6.71□□□□□ -1.34
HMGB1P33-201ENST00000563485 FKBP4Q02790 459 aaKnown RBP eCLIP6.71□□□□□ -1.34
HMGB1P33-201ENST00000563485 SF3B2Q13435 895 aaKnown RBP6.71□□□□□ -1.34
HMGB1P33-201ENST00000563485 CACTIN-AS1Q8N1I8 211 aa6.71□□□□□ -1.34
HMGB1P33-201ENST00000563485 TP53INP1Q96A56 240 aa6.71□□□□□ -1.34
HMGB1P33-201ENST00000563485 SRA1Q9HD15 236 aaKnown RBP6.71□□□□□ -1.34
HMGB1P33-201ENST00000563485 SALL4Q9UJQ4 1053 aa6.71□□□□□ -1.34
HMGB1P33-201ENST00000563485 CDC27P30260 824 aa6.7□□□□□ -1.34
HMGB1P33-201ENST00000563485 CDC25BP30305 580 aa6.7□□□□□ -1.34
HMGB1P33-201ENST00000563485 MAP4K3Q8IVH8 894 aa6.7□□□□□ -1.34
HMGB1P33-201ENST00000563485 GALNT11Q8NCW6 608 aa6.7□□□□□ -1.34
HMGB1P33-201ENST00000563485 MEGF10Q96KG7 1140 aa6.7□□□□□ -1.34
HMGB1P33-201ENST00000563485 POP1Q99575 1024 aaKnown RBP6.7□□□□□ -1.34
HMGB1P33-201ENST00000563485 MUC3BQ9H195 1237 aa6.7□□□□□ -1.34
HMGB1P33-201ENST00000563485 CCDC87Q9NVE4 849 aa6.7□□□□□ -1.34
HMGB1P33-201ENST00000563485 TRPA1O75762 1119 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms