RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 DOK7Q18PE1 504 aa27.02■■□□□ 1.92
CHD9-208ENST00000563410 CCDC27Q2M243 656 aa27.02■■□□□ 1.92
CHD9-208ENST00000563410 CYP4F22Q6NT55 531 aa27.02■■□□□ 1.92
CHD9-208ENST00000563410 MAP3K2Q9Y2U5 619 aa27.02■■□□□ 1.92
CHD9-208ENST00000563410 PSME4Q14997 1843 aa27.02■■□□□ 1.92
CHD9-208ENST00000563410 CELF2O95319 508 aaKnown RBP27.01■■□□□ 1.91
CHD9-208ENST00000563410 MAP2K1Q02750 393 aaPredicted RBP27.01■■□□□ 1.91
CHD9-208ENST00000563410 CCDC152Q4G0S7 254 aa27.01■■□□□ 1.91
CHD9-208ENST00000563410 LBX1P52954 281 aa27■■□□□ 1.91
CHD9-208ENST00000563410 KSR2Q6VAB6 950 aa27■■□□□ 1.91
CHD9-208ENST00000563410 PAXIP1Q6ZW49 1069 aaPredicted RBP27■■□□□ 1.91
CHD9-208ENST00000563410 SAPCD2Q86UD0 394 aa27■■□□□ 1.91
CHD9-208ENST00000563410 WWC1Q8IX03 1113 aa27■■□□□ 1.91
CHD9-208ENST00000563410 SPEF2Q9C093 1822 aa27■■□□□ 1.91
CHD9-208ENST00000563410 PI4KAP2A4QPH2 592 aa26.99■■□□□ 1.91
CHD9-208ENST00000563410 IGKV5-2P06315 115 aa26.99■■□□□ 1.91
CHD9-208ENST00000563410 ECE1P42892 770 aa26.99■■□□□ 1.91
CHD9-208ENST00000563410 SAMD7Q7Z3H4 446 aa26.99■■□□□ 1.91
CHD9-208ENST00000563410 PI4KAP1Q8N8J0 262 aa26.99■■□□□ 1.91
CHD9-208ENST00000563410 CCDC85AQ96PX6 553 aaPredicted RBP26.99■■□□□ 1.91
CHD9-208ENST00000563410 CACNA1FO60840 1977 aa26.98■■□□□ 1.91
CHD9-208ENST00000563410 EGFRP00533 1210 aa26.98■■□□□ 1.91
CHD9-208ENST00000563410 HSPA8P11142 646 aaKnown RBP26.98■■□□□ 1.91
CHD9-208ENST00000563410 CDC37L1Q7L3B6 337 aa26.98■■□□□ 1.91
CHD9-208ENST00000563410 UFL1O94874 794 aa26.97■■□□□ 1.91
CHD9-208ENST00000563410 RPS12P25398 132 aaKnown RBP26.97■■□□□ 1.91
CHD9-208ENST00000563410 GRM1Q13255 1194 aa26.97■■□□□ 1.91
CHD9-208ENST00000563410 ZC3H12CQ9C0D7 883 aaKnown RBP26.97■■□□□ 1.91
CHD9-208ENST00000563410 ANKIB1Q9P2G1 1089 aa26.97■■□□□ 1.91
CHD9-208ENST00000563410 TBC1D10BQ4KMP7 808 aaPredicted RBP26.96■■□□□ 1.91
CHD9-208ENST00000563410 GGA1Q9UJY5 639 aa26.96■■□□□ 1.91
CHD9-208ENST00000563410 VIL1P09327 827 aaKnown RBP26.95■■□□□ 1.9
CHD9-208ENST00000563410 TWISTNBQ3B726 338 aaPredicted RBP26.95■■□□□ 1.9
CHD9-208ENST00000563410 G2E3Q7L622 706 aa26.95■■□□□ 1.9
CHD9-208ENST00000563410 STK31Q9BXU1 1019 aa26.95■■□□□ 1.9
CHD9-208ENST00000563410 IL16Q14005 1332 aa26.94■■□□□ 1.9
CHD9-208ENST00000563410 DLK2Q6UY11 383 aa26.94■■□□□ 1.9
CHD9-208ENST00000563410 USP48Q86UV5 1035 aa26.94■■□□□ 1.9
CHD9-208ENST00000563410 ANKRD18AQ8IVF6 992 aa26.94■■□□□ 1.9
CHD9-208ENST00000563410 HHIPL1Q96JK4 782 aa26.94■■□□□ 1.9
CHD9-208ENST00000563410 ZNF408Q9H9D4 720 aa26.94■■□□□ 1.9
CHD9-208ENST00000563410 AOC2O75106 756 aa26.93■■□□□ 1.9
CHD9-208ENST00000563410 CTSWP56202 376 aa26.93■■□□□ 1.9
CHD9-208ENST00000563410 CWF19L2Q2TBE0 894 aaKnown RBP26.93■■□□□ 1.9
CHD9-208ENST00000563410 NCBP3Q53F19 620 aaKnown RBP26.93■■□□□ 1.9
CHD9-208ENST00000563410 TTLL11Q8NHH1 800 aa26.92■■□□□ 1.9
CHD9-208ENST00000563410 XDHP47989 1333 aa26.91■■□□□ 1.9
CHD9-208ENST00000563410 NEURL1BA8MQ27 555 aa26.91■■□□□ 1.9
CHD9-208ENST00000563410 SLC4A2P04920 1241 aa26.91■■□□□ 1.9
CHD9-208ENST00000563410 MAP2K2P36507 400 aa26.91■■□□□ 1.9
CHD9-208ENST00000563410 NEXNQ0ZGT2 675 aa26.91■■□□□ 1.9
CHD9-208ENST00000563410 RBM26Q5T8P6 1007 aaKnown RBP26.9■■□□□ 1.9
CHD9-208ENST00000563410 ZNF646O15015 1829 aaPredicted RBP26.9■■□□□ 1.9
CHD9-208ENST00000563410 ZNF609O15014 1411 aa26.9■■□□□ 1.9
CHD9-208ENST00000563410 WTIPA6NIX2 430 aaPredicted RBP26.89■■□□□ 1.9
CHD9-208ENST00000563410 G3V3G9 751 aa26.89■■□□□ 1.9
CHD9-208ENST00000563410 DCAF8Q5TAQ9 597 aa26.89■■□□□ 1.9
CHD9-208ENST00000563410 CDC5LQ99459 802 aaKnown RBP26.89■■□□□ 1.9
CHD9-208ENST00000563410 GREM2Q9H772 168 aa26.89■■□□□ 1.9
CHD9-208ENST00000563410 MRS2Q9HD23 443 aa26.89■■□□□ 1.9
CHD9-208ENST00000563410 H7C1W4 665 aa26.88■■□□□ 1.89
CHD9-208ENST00000563410 ATP2B4P23634 1241 aa26.88■■□□□ 1.89
CHD9-208ENST00000563410 KIF4BQ2VIQ3 1234 aa26.88■■□□□ 1.89
CHD9-208ENST00000563410 KRT26Q7Z3Y9 468 aa26.88■■□□□ 1.89
CHD9-208ENST00000563410 FANCIQ9NVI1 1328 aa26.88■■□□□ 1.89
CHD9-208ENST00000563410 BEGAINQ9BUH8 593 aa26.87■■□□□ 1.89
CHD9-208ENST00000563410 BSDC1Q9NW68 430 aaPredicted RBP26.87■■□□□ 1.89
CHD9-208ENST00000563410 MINPP1Q9UNW1 487 aa26.87■■□□□ 1.89
CHD9-208ENST00000563410 ADM5C9JUS6 153 aa26.86■■□□□ 1.89
CHD9-208ENST00000563410 FLIIQ13045 1269 aa26.86■■□□□ 1.89
CHD9-208ENST00000563410 RSBN1LQ6PCB5 846 aaPredicted RBP26.86■■□□□ 1.89
CHD9-208ENST00000563410 UBE3BQ7Z3V4 1068 aa26.86■■□□□ 1.89
CHD9-208ENST00000563410 AGBL3Q8NEM8 1001 aa26.86■■□□□ 1.89
CHD9-208ENST00000563410 DCPSQ96C86 337 aaKnown RBP26.86■■□□□ 1.89
CHD9-208ENST00000563410 ZNF280AP59817 542 aaPredicted RBP26.85■■□□□ 1.89
CHD9-208ENST00000563410 GMLQ99445 158 aa26.85■■□□□ 1.89
CHD9-208ENST00000563410 ASTN2O75129 1339 aaPredicted RBP26.85■■□□□ 1.89
CHD9-208ENST00000563410 HUNKP57058 714 aa26.84■■□□□ 1.89
CHD9-208ENST00000563410 GCKRQ14397 625 aa26.84■■□□□ 1.89
CHD9-208ENST00000563410 GGA3Q9NZ52 723 aa26.84■■□□□ 1.89
CHD9-208ENST00000563410 CASP8AP2Q9UKL3 1982 aa26.84■■□□□ 1.89
CHD9-208ENST00000563410 MED23Q9ULK4 1368 aa26.84■■□□□ 1.89
CHD9-208ENST00000563410 VAMP4O75379 141 aa26.83■■□□□ 1.89
CHD9-208ENST00000563410 CASP7P55210 303 aa26.83■■□□□ 1.89
CHD9-208ENST00000563410 PODNQ7Z5L7 613 aa26.83■■□□□ 1.89
CHD9-208ENST00000563410 PLA2G12BQ9BX93 195 aa26.83■■□□□ 1.89
CHD9-208ENST00000563410 TSKSQ9UJT2 592 aa26.83■■□□□ 1.89
CHD9-208ENST00000563410 BRPF1P55201 1214 aaPredicted RBP26.82■■□□□ 1.88
CHD9-208ENST00000563410 WDR63Q8IWG1 891 aa26.82■■□□□ 1.88
CHD9-208ENST00000563410 DNAAF4Q8WXU2 420 aa26.82■■□□□ 1.88
CHD9-208ENST00000563410 ZIC5Q96T25 663 aa26.82■■□□□ 1.88
CHD9-208ENST00000563410 GBA2Q9HCG7 927 aaPredicted RBP26.82■■□□□ 1.88
CHD9-208ENST00000563410 SALL2Q9Y467 1007 aaPredicted RBP26.82■■□□□ 1.88
CHD9-208ENST00000563410 USP17L3A6NCW0 530 aa26.81■■□□□ 1.88
CHD9-208ENST00000563410 USP17L4A6NCW7 530 aa26.81■■□□□ 1.88
CHD9-208ENST00000563410 ANP32CO43423 234 aa26.81■■□□□ 1.88
CHD9-208ENST00000563410 CCT4P50991 539 aaKnown RBP26.81■■□□□ 1.88
CHD9-208ENST00000563410 FKBP5Q13451 457 aaPredicted RBP26.81■■□□□ 1.88
CHD9-208ENST00000563410 USP17L1Q7RTZ2 530 aa26.81■■□□□ 1.88
CHD9-208ENST00000563410 ZNF316A6NFI3 1004 aaPredicted RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms