RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 BICC1Q9H694 974 aaKnown RBP11.95□□□□□ -0.5
UBFD1-202ENST00000563366 UPF2Q9HAU5 1272 aaKnown RBP11.95□□□□□ -0.5
UBFD1-202ENST00000563366 GPBP1L1Q9HC44 474 aaPredicted RBP11.95□□□□□ -0.5
UBFD1-202ENST00000563366 NOP58Q9Y2X3 529 aaKnown RBP11.95□□□□□ -0.5
UBFD1-202ENST00000563366 LAMB2P55268 1798 aa11.95□□□□□ -0.5
UBFD1-202ENST00000563366 AOX1Q06278 1338 aa11.94□□□□□ -0.5
UBFD1-202ENST00000563366 KCNQ2O43526 872 aa11.94□□□□□ -0.5
UBFD1-202ENST00000563366 SURF6O75683 361 aaKnown RBP11.94□□□□□ -0.5
UBFD1-202ENST00000563366 ANP32AP39687 249 aaKnown RBP11.94□□□□□ -0.5
UBFD1-202ENST00000563366 EIF5P55010 431 aaKnown RBP11.94□□□□□ -0.5
UBFD1-202ENST00000563366 RBM6P78332 1123 aaKnown RBP11.94□□□□□ -0.5
UBFD1-202ENST00000563366 RABL6Q3YEC7 729 aaPredicted RBP11.94□□□□□ -0.5
UBFD1-202ENST00000563366 C6orf132Q5T0Z8 1188 aa11.94□□□□□ -0.5
UBFD1-202ENST00000563366 FAM196AQ6ZSG2 479 aa11.94□□□□□ -0.5
UBFD1-202ENST00000563366 UBE3BQ7Z3V4 1068 aa11.94□□□□□ -0.5
UBFD1-202ENST00000563366 DZIP3Q86Y13 1208 aaKnown RBP11.94□□□□□ -0.5
UBFD1-202ENST00000563366 LHX6Q9UPM6 363 aa11.94□□□□□ -0.5
UBFD1-202ENST00000563366 EXOC6BQ9Y2D4 811 aa11.94□□□□□ -0.5
UBFD1-202ENST00000563366 ZNF652Q9Y2D9 606 aa11.94□□□□□ -0.5
UBFD1-202ENST00000563366 AK9Q5TCS8 1911 aa11.94□□□□□ -0.5
UBFD1-202ENST00000563366 TUBGCP6Q96RT7 1819 aa11.93□□□□□ -0.5
UBFD1-202ENST00000563366 PSDA5PKW4 1024 aaPredicted RBP11.93□□□□□ -0.5
UBFD1-202ENST00000563366 ATP5J2-PTCD1G3V325 749 aa11.93□□□□□ -0.5
UBFD1-202ENST00000563366 H7C1W4 665 aa11.93□□□□□ -0.5
UBFD1-202ENST00000563366 HSP90B1P14625 803 aaKnown RBP11.93□□□□□ -0.5
UBFD1-202ENST00000563366 OS9Q13438 667 aaPredicted RBP11.93□□□□□ -0.5
UBFD1-202ENST00000563366 RC3H1Q5TC82 1133 aaKnown RBP11.93□□□□□ -0.5
UBFD1-202ENST00000563366 KRT27Q7Z3Y8 459 aa11.93□□□□□ -0.5
UBFD1-202ENST00000563366 ARXQ96QS3 562 aa11.93□□□□□ -0.5
UBFD1-202ENST00000563366 OSBPL3Q9H4L5 887 aa11.93□□□□□ -0.5
UBFD1-202ENST00000563366 CDHR2Q9BYE9 1310 aa11.92□□□□□ -0.5
UBFD1-202ENST00000563366 C4BP0C0L5 1744 aa11.92□□□□□ -0.5
UBFD1-202ENST00000563366 PCCAP05165 728 aaPredicted RBP11.92□□□□□ -0.5
UBFD1-202ENST00000563366 ITPK1Q13572 414 aa11.92□□□□□ -0.5
UBFD1-202ENST00000563366 PPP4R3BQ5MIZ7 849 aa11.92□□□□□ -0.5
UBFD1-202ENST00000563366 INTS5Q6P9B9 1019 aaKnown RBP11.92□□□□□ -0.5
UBFD1-202ENST00000563366 PLEKHM2Q8IWE5 1019 aa11.92□□□□□ -0.5
UBFD1-202ENST00000563366 RHPN1Q8TCX5 695 aa11.92□□□□□ -0.5
UBFD1-202ENST00000563366 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
UBFD1-202ENST00000563366 ADAM33Q9BZ11 813 aa11.92□□□□□ -0.5
UBFD1-202ENST00000563366 APBB1O00213 710 aa11.91□□□□□ -0.5
UBFD1-202ENST00000563366 CASP7P55210 303 aa11.91□□□□□ -0.5
UBFD1-202ENST00000563366 G3BP1Q13283 466 aaKnown RBP eCLIP11.91□□□□□ -0.5
UBFD1-202ENST00000563366 PARP10Q53GL7 1025 aa11.91□□□□□ -0.5
UBFD1-202ENST00000563366 CASC1Q6TDU7 716 aa11.91□□□□□ -0.5
UBFD1-202ENST00000563366 CLASRPQ8N2M8 674 aaKnown RBP11.91□□□□□ -0.5
UBFD1-202ENST00000563366 ZBTB38Q8NAP3 1195 aaPredicted RBP11.91□□□□□ -0.5
UBFD1-202ENST00000563366 GPATCH3Q96I76 525 aa11.91□□□□□ -0.5
UBFD1-202ENST00000563366 KAZALD1Q96I82 304 aa11.91□□□□□ -0.5
UBFD1-202ENST00000563366 KDM4CQ9H3R0 1056 aa11.91□□□□□ -0.5
UBFD1-202ENST00000563366 COPRSQ9NQ92 184 aa11.91□□□□□ -0.5
UBFD1-202ENST00000563366 RGPD3A6NKT7 1758 aaPredicted RBP11.91□□□□□ -0.5
UBFD1-202ENST00000563366 RGPD4Q7Z3J3 1758 aa11.91□□□□□ -0.5
UBFD1-202ENST00000563366 HOXB1P14653 301 aaPredicted RBP11.9□□□□□ -0.5
UBFD1-202ENST00000563366 MX1P20591 662 aa11.9□□□□□ -0.5
UBFD1-202ENST00000563366 AMHR2Q16671 573 aa11.9□□□□□ -0.5
UBFD1-202ENST00000563366 TTC22Q5TAA0 569 aa11.9□□□□□ -0.5
UBFD1-202ENST00000563366 CLEC4GQ6UXB4 293 aa11.9□□□□□ -0.5
UBFD1-202ENST00000563366 PLA2G12BQ9BX93 195 aa11.9□□□□□ -0.5
UBFD1-202ENST00000563366 CCNL1Q9UK58 526 aaPredicted RBP11.9□□□□□ -0.5
UBFD1-202ENST00000563366 TTC41PQ6P2S7 1318 aa11.89□□□□□ -0.51
UBFD1-202ENST00000563366 C4AP0C0L4 1744 aa11.89□□□□□ -0.51
UBFD1-202ENST00000563366 SMARCA5O60264 1052 aaPredicted RBP11.89□□□□□ -0.51
UBFD1-202ENST00000563366 CDC45O75419 566 aa11.89□□□□□ -0.51
UBFD1-202ENST00000563366 PDE1AP54750 535 aa11.89□□□□□ -0.51
UBFD1-202ENST00000563366 NLRP10Q86W26 655 aa11.89□□□□□ -0.51
UBFD1-202ENST00000563366 STAP2Q9UGK3 403 aa11.89□□□□□ -0.51
UBFD1-202ENST00000563366 SALL3Q9BXA9 1300 aa11.88□□□□□ -0.51
UBFD1-202ENST00000563366 ERC2O15083 957 aa11.88□□□□□ -0.51
UBFD1-202ENST00000563366 SLC27A3Q5K4L6 730 aa11.88□□□□□ -0.51
UBFD1-202ENST00000563366 LHX8Q68G74 356 aa11.88□□□□□ -0.51
UBFD1-202ENST00000563366 LMBR1LQ6UX01 489 aa11.88□□□□□ -0.51
UBFD1-202ENST00000563366 ZNF34Q8IZ26 560 aa11.88□□□□□ -0.51
UBFD1-202ENST00000563366 LINC00116Q8NCU8 138 aa11.88□□□□□ -0.51
UBFD1-202ENST00000563366 FBXO41Q8TF61 875 aa11.88□□□□□ -0.51
UBFD1-202ENST00000563366 DAXXQ9UER7 740 aaPredicted RBP11.88□□□□□ -0.51
UBFD1-202ENST00000563366 TBC1D2BQ9UPU7 963 aa11.88□□□□□ -0.51
UBFD1-202ENST00000563366 COL24A1Q17RW2 1714 aa11.88□□□□□ -0.51
UBFD1-202ENST00000563366 UBR3Q6ZT12 1888 aa11.87□□□□□ -0.51
UBFD1-202ENST00000563366 DDX60Q8IY21 1712 aaKnown RBP11.87□□□□□ -0.51
UBFD1-202ENST00000563366 RPS6KA4O75676 772 aa11.87□□□□□ -0.51
UBFD1-202ENST00000563366 CAMTA2O94983 1202 aa11.87□□□□□ -0.51
UBFD1-202ENST00000563366 FOXO4P98177 505 aa11.87□□□□□ -0.51
UBFD1-202ENST00000563366 HLFQ16534 295 aa11.87□□□□□ -0.51
UBFD1-202ENST00000563366 CCDC57Q2TAC2 916 aa11.87□□□□□ -0.51
UBFD1-202ENST00000563366 DDRGK1Q96HY6 314 aa11.87□□□□□ -0.51
UBFD1-202ENST00000563366 TRMT112Q9UI30 125 aaKnown RBP11.87□□□□□ -0.51
UBFD1-202ENST00000563366 RTCBQ9Y3I0 505 aaKnown RBP11.87□□□□□ -0.51
UBFD1-202ENST00000563366 SH3TC1Q8TE82 1336 aa11.86□□□□□ -0.51
UBFD1-202ENST00000563366 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
UBFD1-202ENST00000563366 IFIT2P09913 472 aaKnown RBP11.86□□□□□ -0.51
UBFD1-202ENST00000563366 RXRBP28702 533 aa11.86□□□□□ -0.51
UBFD1-202ENST00000563366 TTLL12Q14166 644 aaPredicted RBP11.86□□□□□ -0.51
UBFD1-202ENST00000563366 EPHA10Q5JZY3 1008 aa11.86□□□□□ -0.51
UBFD1-202ENST00000563366 FAM182BQ5T319 152 aa11.86□□□□□ -0.51
UBFD1-202ENST00000563366 CHMP3Q9Y3E7 222 aa11.86□□□□□ -0.51
UBFD1-202ENST00000563366 CASZ1Q86V15 1759 aa11.85□□□□□ -0.51
UBFD1-202ENST00000563366 PDE8AO60658 829 aa11.85□□□□□ -0.51
UBFD1-202ENST00000563366 GLRX3O76003 335 aaKnown RBP11.85□□□□□ -0.51
UBFD1-202ENST00000563366 CIAO1O76071 339 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms