RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TDRD7Q8NHU6 1098 aaKnown RBP15.44■□□□□ 0.06
USB1-207ENST00000563149 EDC3Q96F86 508 aaKnown RBP15.44■□□□□ 0.06
USB1-207ENST00000563149 DBNDD2Q9BQY9 259 aa15.44■□□□□ 0.06
USB1-207ENST00000563149 ADAMTSL3P82987 1691 aa15.44■□□□□ 0.06
USB1-207ENST00000563149 H3BQV1 296 aa15.44■□□□□ 0.06
USB1-207ENST00000563149 H7C1W4 665 aa15.44■□□□□ 0.06
USB1-207ENST00000563149 HSP90B1P14625 803 aaKnown RBP15.44■□□□□ 0.06
USB1-207ENST00000563149 IFFO2Q5TF58 517 aa15.44■□□□□ 0.06
USB1-207ENST00000563149 NAA16Q6N069 864 aaPredicted RBP15.44■□□□□ 0.06
USB1-207ENST00000563149 BRF1Q92994 677 aa15.44■□□□□ 0.06
USB1-207ENST00000563149 AGXT2Q9BYV1 514 aa15.44■□□□□ 0.06
USB1-207ENST00000563149 TFIP11Q9UBB9 837 aaKnown RBP15.44■□□□□ 0.06
USB1-207ENST00000563149 CTAGE5O15320 804 aa15.43■□□□□ 0.06
USB1-207ENST00000563149 DHX32Q7L7V1 743 aaKnown RBP15.43■□□□□ 0.06
USB1-207ENST00000563149 DNAJC2Q99543 621 aaKnown RBP15.43■□□□□ 0.06
USB1-207ENST00000563149 KCNF1Q9H3M0 494 aa15.43■□□□□ 0.06
USB1-207ENST00000563149 CBX8Q9HC52 389 aa15.43■□□□□ 0.06
USB1-207ENST00000563149 PARP4Q9UKK3 1724 aaKnown RBP15.43■□□□□ 0.06
USB1-207ENST00000563149 DTNBO60941 627 aa15.42■□□□□ 0.06
USB1-207ENST00000563149 CAMK4Q16566 473 aa15.42■□□□□ 0.06
USB1-207ENST00000563149 ANO6Q4KMQ2 910 aa15.42■□□□□ 0.06
USB1-207ENST00000563149 MPNDQ8N594 471 aa15.42■□□□□ 0.06
USB1-207ENST00000563149 BICD2Q8TD16 824 aa15.42■□□□□ 0.06
USB1-207ENST00000563149 PGBD1Q96JS3 809 aa15.42■□□□□ 0.06
USB1-207ENST00000563149 SPEF2Q9C093 1822 aa15.42■□□□□ 0.06
USB1-207ENST00000563149 JAK2O60674 1132 aa15.41■□□□□ 0.06
USB1-207ENST00000563149 IL15P40933 162 aaPredicted RBP15.41■□□□□ 0.06
USB1-207ENST00000563149 CABP4P57796 275 aa15.41■□□□□ 0.06
USB1-207ENST00000563149 FOXO4P98177 505 aa15.41■□□□□ 0.06
USB1-207ENST00000563149 CHAF1AQ13111 956 aaPredicted RBP15.41■□□□□ 0.06
USB1-207ENST00000563149 LMBR1LQ6UX01 489 aa15.41■□□□□ 0.06
USB1-207ENST00000563149 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.41■□□□□ 0.06
USB1-207ENST00000563149 ATG3Q9NT62 314 aa15.41■□□□□ 0.06
USB1-207ENST00000563149 RCOR1Q9UKL0 485 aa15.41■□□□□ 0.06
USB1-207ENST00000563149 CYP27B1O15528 508 aa15.41■□□□□ 0.06
USB1-207ENST00000563149 CDC25BP30305 580 aa15.41■□□□□ 0.06
USB1-207ENST00000563149 SCRN1Q12765 414 aa15.41■□□□□ 0.06
USB1-207ENST00000563149 PLA2G4DQ86XP0 818 aa15.41■□□□□ 0.06
USB1-207ENST00000563149 VSIG10Q8N0Z9 540 aa15.41■□□□□ 0.06
USB1-207ENST00000563149 PAG1Q9NWQ8 432 aa15.41■□□□□ 0.06
USB1-207ENST00000563149 CHMP3Q9Y3E7 222 aa15.41■□□□□ 0.06
USB1-207ENST00000563149 GLI3P10071 1580 aa15.4■□□□□ 0.06
USB1-207ENST00000563149 NR1I2O75469 434 aa15.4■□□□□ 0.06
USB1-207ENST00000563149 CSB-PGBD3P0DP91 1061 aa15.4■□□□□ 0.06
USB1-207ENST00000563149 FGD1P98174 961 aa15.4■□□□□ 0.06
USB1-207ENST00000563149 EXOSC10Q01780 885 aaKnown RBP15.4■□□□□ 0.06
USB1-207ENST00000563149 ZMYM1Q5SVZ6 1142 aa15.4■□□□□ 0.06
USB1-207ENST00000563149 CCDC129Q6ZRS4 1044 aa15.4■□□□□ 0.06
USB1-207ENST00000563149 LUZP1Q86V48 1076 aa15.4■□□□□ 0.06
USB1-207ENST00000563149 CKAP2LQ8IYA6 745 aa15.4■□□□□ 0.06
USB1-207ENST00000563149 FBXL16Q8N461 479 aa15.4■□□□□ 0.06
USB1-207ENST00000563149 SPC24Q8NBT2 197 aa15.4■□□□□ 0.06
USB1-207ENST00000563149 NSUN7Q8NE18 718 aaKnown RBP15.4■□□□□ 0.06
USB1-207ENST00000563149 ZNF396Q96N95 335 aaPredicted RBP15.4■□□□□ 0.06
USB1-207ENST00000563149 SEC62Q99442 399 aaKnown RBP15.4■□□□□ 0.06
USB1-207ENST00000563149 PYCARDQ9ULZ3 195 aa15.4■□□□□ 0.06
USB1-207ENST00000563149 LAMA4Q16363 1823 aa15.4■□□□□ 0.06
USB1-207ENST00000563149 MYH15Q9Y2K3 1946 aa15.4■□□□□ 0.06
USB1-207ENST00000563149 ATP5J2-PTCD1G3V325 749 aa15.39■□□□□ 0.05
USB1-207ENST00000563149 PTCD1O75127 700 aaKnown RBP15.39■□□□□ 0.05
USB1-207ENST00000563149 ZNF75DP51815 510 aa15.39■□□□□ 0.05
USB1-207ENST00000563149 LRRFIP1Q32MZ4 808 aaKnown RBP15.39■□□□□ 0.05
USB1-207ENST00000563149 DDX46Q7L014 1031 aaKnown RBP15.39■□□□□ 0.05
USB1-207ENST00000563149 ATG9AQ7Z3C6 839 aa15.39■□□□□ 0.05
USB1-207ENST00000563149 ZNF274Q96GC6 653 aaPredicted RBP15.39■□□□□ 0.05
USB1-207ENST00000563149 DCCP43146 1447 aa15.39■□□□□ 0.05
USB1-207ENST00000563149 CIAO1O76071 339 aa15.39■□□□□ 0.05
USB1-207ENST00000563149 ZNF165P49910 485 aa15.39■□□□□ 0.05
USB1-207ENST00000563149 STOX1Q6ZVD7 989 aa15.39■□□□□ 0.05
USB1-207ENST00000563149 JARID2Q92833 1246 aaPredicted RBP15.39■□□□□ 0.05
USB1-207ENST00000563149 CWC25Q9NXE8 425 aaPredicted RBP15.39■□□□□ 0.05
USB1-207ENST00000563149 ADD1P35611 737 aaKnown RBP15.38■□□□□ 0.05
USB1-207ENST00000563149 SARM1Q6SZW1 724 aa15.38■□□□□ 0.05
USB1-207ENST00000563149 TRIM5Q9C035 493 aa15.38■□□□□ 0.05
USB1-207ENST00000563149 C17orf53Q8N3J3 647 aaPredicted RBP15.37■□□□□ 0.05
USB1-207ENST00000563149 CCDC191Q8NCU4 936 aa15.37■□□□□ 0.05
USB1-207ENST00000563149 NEUROD6Q96NK8 337 aa15.37■□□□□ 0.05
USB1-207ENST00000563149 FBXO3Q9UK99 471 aa15.37■□□□□ 0.05
USB1-207ENST00000563149 NUP188Q5SRE5 1749 aa15.37■□□□□ 0.05
USB1-207ENST00000563149 CPDO75976 1380 aa15.37■□□□□ 0.05
USB1-207ENST00000563149 SALL1Q9NSC2 1324 aa15.37■□□□□ 0.05
USB1-207ENST00000563149 PTPDC1A2A3K4 754 aa15.36■□□□□ 0.05
USB1-207ENST00000563149 EYA2O00167 538 aa15.36■□□□□ 0.05
USB1-207ENST00000563149 GOLIM4O00461 696 aa15.36■□□□□ 0.05
USB1-207ENST00000563149 RNF113AO15541 343 aaKnown RBP15.36■□□□□ 0.05
USB1-207ENST00000563149 ATF3P18847 181 aa15.36■□□□□ 0.05
USB1-207ENST00000563149 PTGS1P23219 599 aa15.36■□□□□ 0.05
USB1-207ENST00000563149 CCDC186Q7Z3E2 898 aa15.36■□□□□ 0.05
USB1-207ENST00000563149 DRC7Q8IY82 874 aa15.36■□□□□ 0.05
USB1-207ENST00000563149 DDX11Q96FC9 970 aa15.36■□□□□ 0.05
USB1-207ENST00000563149 NDUFB9Q9Y6M9 179 aa15.36■□□□□ 0.05
USB1-207ENST00000563149 TNS3Q68CZ2 1445 aa15.36■□□□□ 0.05
USB1-207ENST00000563149 E7EWF7 191 aa15.36■□□□□ 0.05
USB1-207ENST00000563149 CTDNEP1O95476 244 aa15.36■□□□□ 0.05
USB1-207ENST00000563149 IFIT1P09914 478 aaKnown RBP15.36■□□□□ 0.05
USB1-207ENST00000563149 HSPD1P10809 573 aaKnown RBP15.36■□□□□ 0.05
USB1-207ENST00000563149 PIP4K2AP48426 406 aaPredicted RBP15.36■□□□□ 0.05
USB1-207ENST00000563149 EVCP57679 992 aa15.36■□□□□ 0.05
USB1-207ENST00000563149 STX1AQ16623 288 aa15.36■□□□□ 0.05
USB1-207ENST00000563149 GOLGA6L19H0YKK7 550 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms