RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 ADCK5Q3MIX3 580 aa16.09■□□□□ 0.17
AC040174.1-201ENST00000563003 VPS53Q5VIR6 699 aa16.09■□□□□ 0.17
AC040174.1-201ENST00000563003 BMS1Q14692 1282 aaKnown RBP16.08■□□□□ 0.17
AC040174.1-201ENST00000563003 CWC27Q6UX04 472 aaKnown RBP16.08■□□□□ 0.17
AC040174.1-201ENST00000563003 PI4K2BQ8TCG2 481 aa16.08■□□□□ 0.17
AC040174.1-201ENST00000563003 MRC1P22897 1456 aa16.08■□□□□ 0.16
AC040174.1-201ENST00000563003 NEMFO60524 1076 aa16.08■□□□□ 0.16
AC040174.1-201ENST00000563003 JAKMIP1Q96N16 626 aaKnown RBP16.08■□□□□ 0.16
AC040174.1-201ENST00000563003 CARD10Q9BWT7 1032 aa16.08■□□□□ 0.16
AC040174.1-201ENST00000563003 TFIP11Q9UBB9 837 aaKnown RBP16.08■□□□□ 0.16
AC040174.1-201ENST00000563003 NR1I2O75469 434 aa16.07■□□□□ 0.16
AC040174.1-201ENST00000563003 DNAAF4Q8WXU2 420 aa16.07■□□□□ 0.16
AC040174.1-201ENST00000563003 GTF3C6Q969F1 213 aa16.07■□□□□ 0.16
AC040174.1-201ENST00000563003 USP44Q9H0E7 712 aa16.07■□□□□ 0.16
AC040174.1-201ENST00000563003 LRRFIP2Q9Y608 721 aaKnown RBP16.07■□□□□ 0.16
AC040174.1-201ENST00000563003 PI4KAP2A4QPH2 592 aa16.07■□□□□ 0.16
AC040174.1-201ENST00000563003 PI4KAP1Q8N8J0 262 aa16.07■□□□□ 0.16
AC040174.1-201ENST00000563003 SPATA32Q96LK8 384 aa16.07■□□□□ 0.16
AC040174.1-201ENST00000563003 TRIM34Q9BYJ4 488 aa16.07■□□□□ 0.16
AC040174.1-201ENST00000563003 H2AFXP16104 143 aaPredicted RBP16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 SLC39A6Q13433 755 aa16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 CCAR2Q8N163 923 aaKnown RBP16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 ZCRB1Q8TBF4 217 aaKnown RBP16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 FHOD1Q9Y613 1164 aa16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 CCDC69A6NI79 296 aa16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 EVA1CP58658 441 aa16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 CCZ1BP86790 482 aa16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 CCZ1P86791 482 aaPredicted RBP16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 ERCC6LQ2NKX8 1250 aa16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 SARM1Q6SZW1 724 aa16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 DDX54Q8TDD1 881 aaKnown RBP16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 SCAND2PQ9GZW5 306 aaPredicted RBP16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 ZSWIM6Q9HCJ5 1215 aa16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 USP16Q9Y5T5 823 aa16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 CYP46A1Q9Y6A2 500 aa16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 PCDH11XQ9BZA7 1347 aa16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 PCDH11YQ9BZA8 1340 aa16.06■□□□□ 0.16
AC040174.1-201ENST00000563003 PRAMEF22A3QJZ6 481 aa16.05■□□□□ 0.16
AC040174.1-201ENST00000563003 ANXA1P04083 346 aa16.05■□□□□ 0.16
AC040174.1-201ENST00000563003 UBTFL1P0CB47 393 aaPredicted RBP16.05■□□□□ 0.16
AC040174.1-201ENST00000563003 IQCB1Q15051 598 aa16.05■□□□□ 0.16
AC040174.1-201ENST00000563003 RNF20Q5VTR2 975 aa16.05■□□□□ 0.16
AC040174.1-201ENST00000563003 CNTROBQ8N137 903 aa16.05■□□□□ 0.16
AC040174.1-201ENST00000563003 LEO1Q8WVC0 666 aaPredicted RBP16.05■□□□□ 0.16
AC040174.1-201ENST00000563003 MRFAP1L1Q96HT8 127 aa16.05■□□□□ 0.16
AC040174.1-201ENST00000563003 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.05■□□□□ 0.16
AC040174.1-201ENST00000563003 PHLPP1O60346 1717 aa16.05■□□□□ 0.16
AC040174.1-201ENST00000563003 GOLGA6L19H0YKK7 550 aa16.05■□□□□ 0.16
AC040174.1-201ENST00000563003 BEND3Q5T5X7 828 aa16.05■□□□□ 0.16
AC040174.1-201ENST00000563003 PRPF40BQ6NWY9 871 aaKnown RBP16.05■□□□□ 0.16
AC040174.1-201ENST00000563003 FILIP1Q7Z7B0 1213 aa16.05■□□□□ 0.16
AC040174.1-201ENST00000563003 DDX21Q9NR30 783 aaKnown RBP eCLIP16.05■□□□□ 0.16
AC040174.1-201ENST00000563003 FEZ2Q9UHY8 353 aaPredicted RBP16.05■□□□□ 0.16
AC040174.1-201ENST00000563003 IL2RBP14784 551 aa16.04■□□□□ 0.16
AC040174.1-201ENST00000563003 CABP4P57796 275 aa16.04■□□□□ 0.16
AC040174.1-201ENST00000563003 PTH1RQ03431 593 aa16.04■□□□□ 0.16
AC040174.1-201ENST00000563003 TSPYL1Q9H0U9 437 aa16.04■□□□□ 0.16
AC040174.1-201ENST00000563003 TPCN1Q9ULQ1 816 aa16.04■□□□□ 0.16
AC040174.1-201ENST00000563003 ADCY9O60503 1353 aa16.04■□□□□ 0.16
AC040174.1-201ENST00000563003 TTC5Q8N0Z6 440 aa16.04■□□□□ 0.16
AC040174.1-201ENST00000563003 PGBD1Q96JS3 809 aa16.04■□□□□ 0.16
AC040174.1-201ENST00000563003 STRN4Q9NRL3 753 aa16.04■□□□□ 0.16
AC040174.1-201ENST00000563003 COL16A1Q07092 1604 aaPredicted RBP16.03■□□□□ 0.16
AC040174.1-201ENST00000563003 CAVIN2O95810 425 aa16.03■□□□□ 0.16
AC040174.1-201ENST00000563003 CLCN6P51797 869 aa16.03■□□□□ 0.16
AC040174.1-201ENST00000563003 RAD51AP2Q09MP3 1159 aa16.03■□□□□ 0.16
AC040174.1-201ENST00000563003 PROSER3Q2NL68 480 aa16.03■□□□□ 0.16
AC040174.1-201ENST00000563003 KSR2Q6VAB6 950 aa16.03■□□□□ 0.16
AC040174.1-201ENST00000563003 BICD2Q8TD16 824 aa16.03■□□□□ 0.16
AC040174.1-201ENST00000563003 TM6SF1Q9BZW5 370 aa16.03■□□□□ 0.16
AC040174.1-201ENST00000563003 PNMA6AP0CW24 399 aaPredicted RBP16.03■□□□□ 0.16
AC040174.1-201ENST00000563003 PLA2G4AP47712 749 aa16.03■□□□□ 0.16
AC040174.1-201ENST00000563003 LARP1Q6PKG0 1096 aaKnown RBP16.03■□□□□ 0.16
AC040174.1-201ENST00000563003 LRRN4CLQ8ND94 238 aa16.03■□□□□ 0.16
AC040174.1-201ENST00000563003 C5P01031 1676 aa16.03■□□□□ 0.16
AC040174.1-201ENST00000563003 SURF6O75683 361 aaKnown RBP16.02■□□□□ 0.16
AC040174.1-201ENST00000563003 PDCP20941 246 aa16.02■□□□□ 0.16
AC040174.1-201ENST00000563003 C11orf57Q6ZUT1 292 aaPredicted RBP16.02■□□□□ 0.16
AC040174.1-201ENST00000563003 ZNF496Q96IT1 587 aaPredicted RBP16.02■□□□□ 0.16
AC040174.1-201ENST00000563003 L2HGDHQ9H9P8 463 aa16.02■□□□□ 0.16
AC040174.1-201ENST00000563003 AHDC1Q5TGY3 1603 aaPredicted RBP16.02■□□□□ 0.16
AC040174.1-201ENST00000563003 SNRPA1P09661 255 aaKnown RBP16.02■□□□□ 0.15
AC040174.1-201ENST00000563003 RHPN1Q8TCX5 695 aa16.02■□□□□ 0.15
AC040174.1-201ENST00000563003 SSH3Q8TE77 659 aa16.02■□□□□ 0.15
AC040174.1-201ENST00000563003 FMNL2Q96PY5 1086 aa16.02■□□□□ 0.15
AC040174.1-201ENST00000563003 KCND1Q9NSA2 647 aa16.02■□□□□ 0.15
AC040174.1-201ENST00000563003 KIF2AO00139 706 aaPredicted RBP16.01■□□□□ 0.15
AC040174.1-201ENST00000563003 RAB11FIP3O75154 756 aa16.01■□□□□ 0.15
AC040174.1-201ENST00000563003 DDX58O95786 925 aaKnown RBP16.01■□□□□ 0.15
AC040174.1-201ENST00000563003 PDIA6Q15084 440 aa16.01■□□□□ 0.15
AC040174.1-201ENST00000563003 NKX1-1Q15270 411 aaPredicted RBP16.01■□□□□ 0.15
AC040174.1-201ENST00000563003 MAP3K2Q9Y2U5 619 aa16.01■□□□□ 0.15
AC040174.1-201ENST00000563003 ERVV-2B6SEH9 535 aa16.01■□□□□ 0.15
AC040174.1-201ENST00000563003 ALDH1L1O75891 902 aa16.01■□□□□ 0.15
AC040174.1-201ENST00000563003 KCNB2Q92953 911 aa16■□□□□ 0.15
AC040174.1-201ENST00000563003 SNW1Q13573 536 aaKnown RBP16■□□□□ 0.15
AC040174.1-201ENST00000563003 COL9A3Q14050 684 aaPredicted RBP16■□□□□ 0.15
AC040174.1-201ENST00000563003 ARHGAP29Q52LW3 1261 aa15.99■□□□□ 0.15
AC040174.1-201ENST00000563003 CCDC93Q567U6 631 aa15.99■□□□□ 0.15
AC040174.1-201ENST00000563003 NEK11Q8NG66 645 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms