RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 TBC1D16Q8TBP0 767 aa20.44■□□□□ 0.86
HERPUD1-205ENST00000562914 CHMP4AQ9BY43 222 aa20.44■□□□□ 0.86
HERPUD1-205ENST00000562914 ZNF609O15014 1411 aa20.44■□□□□ 0.86
HERPUD1-205ENST00000562914 VIL1P09327 827 aaKnown RBP20.43■□□□□ 0.86
HERPUD1-205ENST00000562914 GOLGA2Q08379 1002 aa20.43■□□□□ 0.86
HERPUD1-205ENST00000562914 DUSP27Q5VZP5 1158 aa20.43■□□□□ 0.86
HERPUD1-205ENST00000562914 RTL9Q8NET4 1388 aa20.43■□□□□ 0.86
HERPUD1-205ENST00000562914 G3V3G9 751 aa20.42■□□□□ 0.86
HERPUD1-205ENST00000562914 KIF4BQ2VIQ3 1234 aa20.42■□□□□ 0.86
HERPUD1-205ENST00000562914 DCAF8Q5TAQ9 597 aa20.42■□□□□ 0.86
HERPUD1-205ENST00000562914 RIC3Q7Z5B4 369 aa20.42■□□□□ 0.86
HERPUD1-205ENST00000562914 SULF1Q8IWU6 871 aa20.42■□□□□ 0.86
HERPUD1-205ENST00000562914 REM2Q8IYK8 340 aaPredicted RBP20.42■□□□□ 0.86
HERPUD1-205ENST00000562914 FAM155AB1AL88 458 aaPredicted RBP20.41■□□□□ 0.86
HERPUD1-205ENST00000562914 SLC34A2O95436 690 aa20.41■□□□□ 0.86
HERPUD1-205ENST00000562914 CALD1Q05682 793 aaKnown RBP20.41■□□□□ 0.86
HERPUD1-205ENST00000562914 DGKZQ13574 1117 aa20.41■□□□□ 0.86
HERPUD1-205ENST00000562914 DOK7Q18PE1 504 aa20.41■□□□□ 0.86
HERPUD1-205ENST00000562914 CCDC152Q4G0S7 254 aa20.41■□□□□ 0.86
HERPUD1-205ENST00000562914 CCDC191Q8NCU4 936 aa20.4■□□□□ 0.86
HERPUD1-205ENST00000562914 AGBL3Q8NEM8 1001 aa20.4■□□□□ 0.86
HERPUD1-205ENST00000562914 ANKIB1Q9P2G1 1089 aa20.4■□□□□ 0.86
HERPUD1-205ENST00000562914 GGA1Q9UJY5 639 aa20.4■□□□□ 0.86
HERPUD1-205ENST00000562914 EGFRP00533 1210 aa20.39■□□□□ 0.85
HERPUD1-205ENST00000562914 ZNF157P51786 506 aaPredicted RBP20.39■□□□□ 0.85
HERPUD1-205ENST00000562914 RTL5Q5HYW3 569 aaPredicted RBP20.39■□□□□ 0.85
HERPUD1-205ENST00000562914 RBM26Q5T8P6 1007 aaKnown RBP20.39■□□□□ 0.85
HERPUD1-205ENST00000562914 MBIPQ9NS73 344 aa20.39■□□□□ 0.85
HERPUD1-205ENST00000562914 ADM5C9JUS6 153 aa20.38■□□□□ 0.85
HERPUD1-205ENST00000562914 PDE8AO60658 829 aa20.38■□□□□ 0.85
HERPUD1-205ENST00000562914 UFL1O94874 794 aa20.38■□□□□ 0.85
HERPUD1-205ENST00000562914 PCCAP05165 728 aaPredicted RBP20.38■□□□□ 0.85
HERPUD1-205ENST00000562914 FKBP1BP68106 108 aa20.38■□□□□ 0.85
HERPUD1-205ENST00000562914 ZNF428Q96B54 188 aa20.38■□□□□ 0.85
HERPUD1-205ENST00000562914 ZIC5Q96T25 663 aa20.38■□□□□ 0.85
HERPUD1-205ENST00000562914 KCNQ5Q9NR82 932 aa20.38■□□□□ 0.85
HERPUD1-205ENST00000562914 IFT57Q9NWB7 429 aa20.38■□□□□ 0.85
HERPUD1-205ENST00000562914 GGA3Q9NZ52 723 aa20.38■□□□□ 0.85
HERPUD1-205ENST00000562914 ADAMTS8Q9UP79 889 aa20.38■□□□□ 0.85
HERPUD1-205ENST00000562914 CASP8AP2Q9UKL3 1982 aa20.37■□□□□ 0.85
HERPUD1-205ENST00000562914 ZNF853P0CG23 659 aa20.37■□□□□ 0.85
HERPUD1-205ENST00000562914 ZNF280AP59817 542 aaPredicted RBP20.37■□□□□ 0.85
HERPUD1-205ENST00000562914 GNAI1P63096 354 aa20.37■□□□□ 0.85
HERPUD1-205ENST00000562914 KIF23Q02241 960 aaPredicted RBP20.37■□□□□ 0.85
HERPUD1-205ENST00000562914 RSBN1LQ6PCB5 846 aaPredicted RBP20.37■□□□□ 0.85
HERPUD1-205ENST00000562914 XDHP47989 1333 aa20.36■□□□□ 0.85
HERPUD1-205ENST00000562914 PITPNM2Q9BZ72 1349 aa20.36■□□□□ 0.85
HERPUD1-205ENST00000562914 DDX58O95786 925 aaKnown RBP20.36■□□□□ 0.85
HERPUD1-205ENST00000562914 SLC10A3P09131 477 aa20.36■□□□□ 0.85
HERPUD1-205ENST00000562914 PODNQ7Z5L7 613 aa20.36■□□□□ 0.85
HERPUD1-205ENST00000562914 COL4A1P02462 1669 aa20.35■□□□□ 0.85
HERPUD1-205ENST00000562914 DLK2Q6UY11 383 aa20.35■□□□□ 0.85
HERPUD1-205ENST00000562914 ANKRD18AQ8IVF6 992 aa20.35■□□□□ 0.85
HERPUD1-205ENST00000562914 MYD88Q99836 296 aa20.35■□□□□ 0.85
HERPUD1-205ENST00000562914 SEC31BQ9NQW1 1179 aa20.35■□□□□ 0.85
HERPUD1-205ENST00000562914 CWC25Q9NXE8 425 aaPredicted RBP20.35■□□□□ 0.85
HERPUD1-205ENST00000562914 ATP2B4P23634 1241 aa20.34■□□□□ 0.85
HERPUD1-205ENST00000562914 CDCA5Q96FF9 252 aa20.34■□□□□ 0.85
HERPUD1-205ENST00000562914 PHAXQ9H814 394 aaKnown RBP20.34■□□□□ 0.85
HERPUD1-205ENST00000562914 RNF186Q9NXI6 227 aa20.34■□□□□ 0.85
HERPUD1-205ENST00000562914 USP17L8P0C7I0 530 aa20.33■□□□□ 0.85
HERPUD1-205ENST00000562914 DDX10Q13206 875 aaKnown RBP20.33■□□□□ 0.85
HERPUD1-205ENST00000562914 SCARF1Q14162 830 aa20.33■□□□□ 0.85
HERPUD1-205ENST00000562914 CDC5LQ99459 802 aaKnown RBP20.33■□□□□ 0.85
HERPUD1-205ENST00000562914 METTL22Q9BUU2 404 aaPredicted RBP20.33■□□□□ 0.85
HERPUD1-205ENST00000562914 POLR2AP24928 1970 aaKnown RBP20.33■□□□□ 0.84
HERPUD1-205ENST00000562914 SCN9AQ15858 1988 aa20.33■□□□□ 0.84
HERPUD1-205ENST00000562914 USP17L3A6NCW0 530 aa20.32■□□□□ 0.84
HERPUD1-205ENST00000562914 USP17L4A6NCW7 530 aa20.32■□□□□ 0.84
HERPUD1-205ENST00000562914 TRPA1O75762 1119 aa20.32■□□□□ 0.84
HERPUD1-205ENST00000562914 MMP14P50281 582 aa20.32■□□□□ 0.84
HERPUD1-205ENST00000562914 ANGEL2Q5VTE6 544 aaKnown RBP20.32■□□□□ 0.84
HERPUD1-205ENST00000562914 CCDC30Q5VVM6 783 aa20.32■□□□□ 0.84
HERPUD1-205ENST00000562914 USP17L1Q7RTZ2 530 aa20.32■□□□□ 0.84
HERPUD1-205ENST00000562914 CSRNP1Q96S65 589 aa20.32■□□□□ 0.84
HERPUD1-205ENST00000562914 GMLQ99445 158 aa20.32■□□□□ 0.84
HERPUD1-205ENST00000562914 MYOZ2Q9NPC6 264 aa20.32■□□□□ 0.84
HERPUD1-205ENST00000562914 PSME4Q14997 1843 aa20.32■□□□□ 0.84
HERPUD1-205ENST00000562914 PAPPA2Q9BXP8 1791 aa20.31■□□□□ 0.84
HERPUD1-205ENST00000562914 AKAP11Q9UKA4 1901 aa20.3■□□□□ 0.84
HERPUD1-205ENST00000562914 MED23Q9ULK4 1368 aa20.3■□□□□ 0.84
HERPUD1-205ENST00000562914 MYO3BQ8WXR4 1341 aa20.29■□□□□ 0.84
HERPUD1-205ENST00000562914 RASAL3Q86YV0 1011 aa20.29■□□□□ 0.84
HERPUD1-205ENST00000562914 BSDC1Q9NW68 430 aaPredicted RBP20.29■□□□□ 0.84
HERPUD1-205ENST00000562914 ASTN2O75129 1339 aaPredicted RBP20.28■□□□□ 0.84
HERPUD1-205ENST00000562914 ELL2O00472 640 aaPredicted RBP20.28■□□□□ 0.84
HERPUD1-205ENST00000562914 CTSWP56202 376 aa20.28■□□□□ 0.84
HERPUD1-205ENST00000562914 CTU1Q7Z7A3 348 aaKnown RBP20.28■□□□□ 0.84
HERPUD1-205ENST00000562914 OGFOD1Q8N543 542 aa20.28■□□□□ 0.84
HERPUD1-205ENST00000562914 APAF1O14727 1248 aa20.27■□□□□ 0.84
HERPUD1-205ENST00000562914 NEXNQ0ZGT2 675 aa20.27■□□□□ 0.84
HERPUD1-205ENST00000562914 KSR2Q6VAB6 950 aa20.27■□□□□ 0.84
HERPUD1-205ENST00000562914 PKN2Q16513 984 aaKnown RBP20.26■□□□□ 0.83
HERPUD1-205ENST00000562914 MAP3K2Q9Y2U5 619 aa20.26■□□□□ 0.83
HERPUD1-205ENST00000562914 NF2P35240 595 aa20.25■□□□□ 0.83
HERPUD1-205ENST00000562914 STRIP1Q5VSL9 837 aa20.25■□□□□ 0.83
HERPUD1-205ENST00000562914 C8orf58Q8NAV2 365 aa20.25■□□□□ 0.83
HERPUD1-205ENST00000562914 TTLL11Q8NHH1 800 aa20.25■□□□□ 0.83
HERPUD1-205ENST00000562914 CCDC85AQ96PX6 553 aaPredicted RBP20.25■□□□□ 0.83
HERPUD1-205ENST00000562914 COA1Q9GZY4 146 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms