RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 TPSG1Q9NRR2 321 aa8.9□□□□□ -0.98
CHD9-206ENST00000562791 CYP2E1P05181 493 aaPredicted RBP8.89□□□□□ -0.99
CHD9-206ENST00000562791 MPSTP25325 297 aa8.89□□□□□ -0.99
CHD9-206ENST00000562791 ADGRE1Q14246 886 aa8.89□□□□□ -0.99
CHD9-206ENST00000562791 MBTPS1Q14703 1052 aa8.89□□□□□ -0.99
CHD9-206ENST00000562791 WFDC8Q8IUA0 241 aa8.89□□□□□ -0.99
CHD9-206ENST00000562791 GHRHP01286 108 aa8.88□□□□□ -0.99
CHD9-206ENST00000562791 EDEM1Q92611 657 aa8.88□□□□□ -0.99
CHD9-206ENST00000562791 TMEM63CQ9P1W3 806 aa8.88□□□□□ -0.99
CHD9-206ENST00000562791 A6NHS1 94 aa8.87□□□□□ -0.99
CHD9-206ENST00000562791 DEAF1O75398 565 aaPredicted RBP8.87□□□□□ -0.99
CHD9-206ENST00000562791 ATP11AP98196 1134 aa8.87□□□□□ -0.99
CHD9-206ENST00000562791 RSPO4Q2I0M5 234 aaPredicted RBP8.87□□□□□ -0.99
CHD9-206ENST00000562791 GDF6Q6KF10 455 aaPredicted RBP8.87□□□□□ -0.99
CHD9-206ENST00000562791 LENG1Q96BZ8 264 aaPredicted RBP8.87□□□□□ -0.99
CHD9-206ENST00000562791 ABI2Q9NYB9 513 aaPredicted RBP8.87□□□□□ -0.99
CHD9-206ENST00000562791 TRIM33Q9UPN9 1127 aa8.87□□□□□ -0.99
CHD9-206ENST00000562791 FNDC3AQ9Y2H6 1198 aaKnown RBP8.87□□□□□ -0.99
CHD9-206ENST00000562791 C9orf172C9J069 976 aa8.86□□□□□ -0.99
CHD9-206ENST00000562791 EIF1AXP47813 144 aaKnown RBP8.86□□□□□ -0.99
CHD9-206ENST00000562791 ADAMTSL4Q6UY14 1074 aa8.86□□□□□ -0.99
CHD9-206ENST00000562791 FBXO11Q86XK2 927 aa8.86□□□□□ -0.99
CHD9-206ENST00000562791 DTWD1Q8N5C7 304 aa8.86□□□□□ -0.99
CHD9-206ENST00000562791 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.86□□□□□ -0.99
CHD9-206ENST00000562791 KIF4AO95239 1232 aa8.85□□□□□ -0.99
CHD9-206ENST00000562791 PDGFAP04085 211 aa8.85□□□□□ -0.99
CHD9-206ENST00000562791 DNM1Q05193 864 aaKnown RBP8.85□□□□□ -0.99
CHD9-206ENST00000562791 NOM1Q5C9Z4 860 aaKnown RBP8.85□□□□□ -0.99
CHD9-206ENST00000562791 NKAPLQ5M9Q1 402 aa8.85□□□□□ -0.99
CHD9-206ENST00000562791 TTC39BQ5VTQ0 682 aaPredicted RBP8.84□□□□□ -0.99
CHD9-206ENST00000562791 PDE12Q6L8Q7 609 aaKnown RBP8.84□□□□□ -0.99
CHD9-206ENST00000562791 TXNRD3Q86VQ6 643 aa8.84□□□□□ -0.99
CHD9-206ENST00000562791 ARID3AQ99856 593 aa8.84□□□□□ -0.99
CHD9-206ENST00000562791 RBSNQ9H1K0 784 aa8.84□□□□□ -0.99
CHD9-206ENST00000562791 GGNBP2Q9H3C7 697 aa8.84□□□□□ -0.99
CHD9-206ENST00000562791 ELP3Q9H9T3 547 aa8.84□□□□□ -0.99
CHD9-206ENST00000562791 CNTN3Q9P232 1028 aa8.84□□□□□ -0.99
CHD9-206ENST00000562791 KANSL3Q9P2N6 904 aa8.84□□□□□ -0.99
CHD9-206ENST00000562791 SUPT5HO00267 1087 aaKnown RBP8.83□□□□□ -1
CHD9-206ENST00000562791 HYAL2Q12891 473 aa8.83□□□□□ -1
CHD9-206ENST00000562791 ZNF438Q7Z4V0 828 aa8.83□□□□□ -1
CHD9-206ENST00000562791 IL22RA1Q8N6P7 574 aa8.83□□□□□ -1
CHD9-206ENST00000562791 SEMA6BQ9H3T3 888 aa8.83□□□□□ -1
CHD9-206ENST00000562791 USP21Q9UK80 565 aa8.83□□□□□ -1
CHD9-206ENST00000562791 ZNF211Q13398 564 aaPredicted RBP8.82□□□□□ -1
CHD9-206ENST00000562791 RASSF4Q9H2L5 321 aa8.82□□□□□ -1
CHD9-206ENST00000562791 ANO2Q9NQ90 1003 aa8.82□□□□□ -1
CHD9-206ENST00000562791 DLL1O00548 723 aa8.81□□□□□ -1
CHD9-206ENST00000562791 ACPPP15309 386 aa8.81□□□□□ -1
CHD9-206ENST00000562791 NPR3P17342 541 aa8.81□□□□□ -1
CHD9-206ENST00000562791 MZF1P28698 734 aaPredicted RBP8.81□□□□□ -1
CHD9-206ENST00000562791 NRG1Q02297 640 aaPredicted RBP8.81□□□□□ -1
CHD9-206ENST00000562791 C1orf127Q8N9H9 656 aa8.81□□□□□ -1
CHD9-206ENST00000562791 POLIQ9UNA4 740 aa8.81□□□□□ -1
CHD9-206ENST00000562791 USTQ9Y2C2 406 aa8.81□□□□□ -1
CHD9-206ENST00000562791 DYRK3O43781 588 aa8.8□□□□□ -1
CHD9-206ENST00000562791 SETDB1Q15047 1291 aa8.8□□□□□ -1
CHD9-206ENST00000562791 C8orf34Q49A92 452 aa8.8□□□□□ -1
CHD9-206ENST00000562791 CEP135Q66GS9 1140 aa8.8□□□□□ -1
CHD9-206ENST00000562791 CEP120Q8N960 986 aa8.8□□□□□ -1
CHD9-206ENST00000562791 SSBP4Q9BWG4 385 aaPredicted RBP8.8□□□□□ -1
CHD9-206ENST00000562791 LACRTQ9GZZ8 138 aa8.8□□□□□ -1
CHD9-206ENST00000562791 ABL1P00519 1130 aa8.79□□□□□ -1
CHD9-206ENST00000562791 NOS3P29474 1203 aa8.79□□□□□ -1
CHD9-206ENST00000562791 TXNDC11Q6PKC3 985 aa8.79□□□□□ -1
CHD9-206ENST00000562791 XKR5Q6UX68 686 aa8.79□□□□□ -1
CHD9-206ENST00000562791 NCAPG2Q86XI2 1143 aa8.79□□□□□ -1
CHD9-206ENST00000562791 SPACA7Q96KW9 195 aa8.79□□□□□ -1
CHD9-206ENST00000562791 CHRDQ9H2X0 955 aa8.79□□□□□ -1
CHD9-206ENST00000562791 TIMELESSQ9UNS1 1208 aa8.79□□□□□ -1
CHD9-206ENST00000562791 FZD6O60353 706 aa8.78□□□□□ -1
CHD9-206ENST00000562791 IGF2-ASQ6U949 168 aa8.78□□□□□ -1
CHD9-206ENST00000562791 WFDC12Q8WWY7 111 aa8.78□□□□□ -1
CHD9-206ENST00000562791 SALL4Q9UJQ4 1053 aa8.78□□□□□ -1
CHD9-206ENST00000562791 SMNDC1O75940 238 aaKnown RBP eCLIP8.77□□□□□ -1.01
CHD9-206ENST00000562791 RPLP1P05386 114 aaKnown RBP8.77□□□□□ -1.01
CHD9-206ENST00000562791 PCSK2P16519 638 aa8.77□□□□□ -1.01
CHD9-206ENST00000562791 IREB2P48200 963 aaKnown RBP8.77□□□□□ -1.01
CHD9-206ENST00000562791 SERPINB4P48594 390 aa8.77□□□□□ -1.01
CHD9-206ENST00000562791 ALKBH2Q6NS38 261 aa8.77□□□□□ -1.01
CHD9-206ENST00000562791 MEGF10Q96KG7 1140 aa8.77□□□□□ -1.01
CHD9-206ENST00000562791 PBX4Q9BYU1 374 aa8.77□□□□□ -1.01
CHD9-206ENST00000562791 CCDC87Q9NVE4 849 aa8.77□□□□□ -1.01
CHD9-206ENST00000562791 LINC01387J3KSC0 135 aa8.76□□□□□ -1.01
CHD9-206ENST00000562791 TRPA1O75762 1119 aa8.76□□□□□ -1.01
CHD9-206ENST00000562791 FAM13AO94988 1023 aa8.76□□□□□ -1.01
CHD9-206ENST00000562791 SF3B2Q13435 895 aaKnown RBP8.76□□□□□ -1.01
CHD9-206ENST00000562791 GALNT11Q8NCW6 608 aa8.76□□□□□ -1.01
CHD9-206ENST00000562791 HHIPQ96QV1 700 aa8.76□□□□□ -1.01
CHD9-206ENST00000562791 POP1Q99575 1024 aaKnown RBP8.76□□□□□ -1.01
CHD9-206ENST00000562791 MTMR7Q9Y216 660 aa8.76□□□□□ -1.01
CHD9-206ENST00000562791 PPME1Q9Y570 386 aa8.76□□□□□ -1.01
CHD9-206ENST00000562791 NFKBIEO00221 500 aa8.75□□□□□ -1.01
CHD9-206ENST00000562791 TM4SF5O14894 197 aa8.75□□□□□ -1.01
CHD9-206ENST00000562791 EPHA1P21709 976 aa8.75□□□□□ -1.01
CHD9-206ENST00000562791 CES1P23141 567 aa8.75□□□□□ -1.01
CHD9-206ENST00000562791 CDC25BP30305 580 aa8.75□□□□□ -1.01
CHD9-206ENST00000562791 FKBP4Q02790 459 aaKnown RBP eCLIP8.75□□□□□ -1.01
CHD9-206ENST00000562791 AAMPQ13685 434 aa8.75□□□□□ -1.01
CHD9-206ENST00000562791 RETREG2Q8NC44 543 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms