RNA–Protein interactions for RNA: ENST00000562778.1

MAP1LC3B-203, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 4

Gene MAP1LC3B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-203ENST00000562778 SHTN1A0MZ66 631 aa24.03■■□□□ 1.44
MAP1LC3B-203ENST00000562778 WTIPA6NIX2 430 aaPredicted RBP24.03■■□□□ 1.44
MAP1LC3B-203ENST00000562778 BEND3Q5T5X7 828 aa24.03■■□□□ 1.44
MAP1LC3B-203ENST00000562778 ECE2O60344 883 aa24.02■■□□□ 1.44
MAP1LC3B-203ENST00000562778 TNIP1Q15025 636 aa24.02■■□□□ 1.44
MAP1LC3B-203ENST00000562778 CDC5LQ99459 802 aaKnown RBP24.02■■□□□ 1.44
MAP1LC3B-203ENST00000562778 EYA3Q99504 573 aa24.02■■□□□ 1.44
MAP1LC3B-203ENST00000562778 BCL2L13Q9BXK5 485 aa24.02■■□□□ 1.44
MAP1LC3B-203ENST00000562778 GGA1Q9UJY5 639 aa24.02■■□□□ 1.44
MAP1LC3B-203ENST00000562778 ZBTB12Q9Y330 459 aaPredicted RBP24.02■■□□□ 1.44
MAP1LC3B-203ENST00000562778 PSMD14O00487 310 aa24.01■■□□□ 1.43
MAP1LC3B-203ENST00000562778 FMR1Q06787 632 aaKnown RBP eCLIP24.01■■□□□ 1.43
MAP1LC3B-203ENST00000562778 FAM161AQ3B820 660 aa24.01■■□□□ 1.43
MAP1LC3B-203ENST00000562778 USP50Q70EL3 339 aaPredicted RBP24.01■■□□□ 1.43
MAP1LC3B-203ENST00000562778 CDCA7LQ96GN5 454 aa24.01■■□□□ 1.43
MAP1LC3B-203ENST00000562778 PLA2G12BQ9BX93 195 aa24.01■■□□□ 1.43
MAP1LC3B-203ENST00000562778 CREBZFQ9NS37 354 aa24.01■■□□□ 1.43
MAP1LC3B-203ENST00000562778 ADARB2Q9NS39 739 aaKnown RBP24.01■■□□□ 1.43
MAP1LC3B-203ENST00000562778 JMYQ8N9B5 988 aa24■■□□□ 1.43
MAP1LC3B-203ENST00000562778 ZC3H12CQ9C0D7 883 aaKnown RBP24■■□□□ 1.43
MAP1LC3B-203ENST00000562778 MKRN1Q9UHC7 482 aaKnown RBP24■■□□□ 1.43
MAP1LC3B-203ENST00000562778 XDHP47989 1333 aa24■■□□□ 1.43
MAP1LC3B-203ENST00000562778 RTL9Q8NET4 1388 aa24■■□□□ 1.43
MAP1LC3B-203ENST00000562778 SCN9AQ15858 1988 aa24■■□□□ 1.43
MAP1LC3B-203ENST00000562778 E9PSI1 815 aa23.99■■□□□ 1.43
MAP1LC3B-203ENST00000562778 SLFN5Q08AF3 891 aa23.99■■□□□ 1.43
MAP1LC3B-203ENST00000562778 MINPP1Q9UNW1 487 aa23.99■■□□□ 1.43
MAP1LC3B-203ENST00000562778 CCER2I3L3R5 266 aa23.98■■□□□ 1.43
MAP1LC3B-203ENST00000562778 ITGA6P23229 1130 aa23.98■■□□□ 1.43
MAP1LC3B-203ENST00000562778 SLC4A10Q6U841 1118 aa23.98■■□□□ 1.43
MAP1LC3B-203ENST00000562778 TRPM4Q8TD43 1214 aa23.98■■□□□ 1.43
MAP1LC3B-203ENST00000562778 BSDC1Q9NW68 430 aaPredicted RBP23.98■■□□□ 1.43
MAP1LC3B-203ENST00000562778 CNOT7Q9UIV1 285 aaKnown RBP23.98■■□□□ 1.43
MAP1LC3B-203ENST00000562778 CSF1RP07333 972 aa23.97■■□□□ 1.43
MAP1LC3B-203ENST00000562778 HIRAP54198 1017 aaPredicted RBP23.97■■□□□ 1.43
MAP1LC3B-203ENST00000562778 TMEM88BA6NKF7 163 aa23.96■■□□□ 1.43
MAP1LC3B-203ENST00000562778 TRAF5O00463 557 aa23.96■■□□□ 1.43
MAP1LC3B-203ENST00000562778 FOXO4P98177 505 aa23.96■■□□□ 1.43
MAP1LC3B-203ENST00000562778 MICALL2Q8IY33 904 aa23.96■■□□□ 1.43
MAP1LC3B-203ENST00000562778 MRPL50Q8N5N7 158 aaKnown RBP23.96■■□□□ 1.43
MAP1LC3B-203ENST00000562778 G3V3G9 751 aa23.95■■□□□ 1.42
MAP1LC3B-203ENST00000562778 ATP2B4P23634 1241 aa23.95■■□□□ 1.42
MAP1LC3B-203ENST00000562778 IGHMBP2P38935 993 aaKnown RBP23.95■■□□□ 1.42
MAP1LC3B-203ENST00000562778 EPHA10Q5JZY3 1008 aa23.95■■□□□ 1.42
MAP1LC3B-203ENST00000562778 DCAF8Q5TAQ9 597 aa23.95■■□□□ 1.42
MAP1LC3B-203ENST00000562778 GRM8O00222 908 aa23.94■■□□□ 1.42
MAP1LC3B-203ENST00000562778 SSH1Q8WYL5 1049 aa23.94■■□□□ 1.42
MAP1LC3B-203ENST00000562778 CCT4P50991 539 aaKnown RBP23.93■■□□□ 1.42
MAP1LC3B-203ENST00000562778 SAMD7Q7Z3H4 446 aa23.93■■□□□ 1.42
MAP1LC3B-203ENST00000562778 CHMP3Q9Y3E7 222 aa23.93■■□□□ 1.42
MAP1LC3B-203ENST00000562778 H7C1D1 291 aa23.92■■□□□ 1.42
MAP1LC3B-203ENST00000562778 EGFRP00533 1210 aa23.92■■□□□ 1.42
MAP1LC3B-203ENST00000562778 DPF2Q92785 391 aa23.92■■□□□ 1.42
MAP1LC3B-203ENST00000562778 GLIS2Q9BZE0 524 aaPredicted RBP23.92■■□□□ 1.42
MAP1LC3B-203ENST00000562778 SRCIN1Q9C0H9 1055 aa23.92■■□□□ 1.42
MAP1LC3B-203ENST00000562778 CNTNAP1P78357 1384 aa23.91■■□□□ 1.42
MAP1LC3B-203ENST00000562778 TBC1D10BQ4KMP7 808 aaPredicted RBP23.91■■□□□ 1.42
MAP1LC3B-203ENST00000562778 LMBR1LQ6UX01 489 aa23.91■■□□□ 1.42
MAP1LC3B-203ENST00000562778 MPHOSPH8Q99549 860 aa23.91■■□□□ 1.42
MAP1LC3B-203ENST00000562778 C9orf78Q9NZ63 289 aaPredicted RBP23.91■■□□□ 1.42
MAP1LC3B-203ENST00000562778 ANKRD18BA2A2Z9 1011 aa23.9■■□□□ 1.42
MAP1LC3B-203ENST00000562778 ALDH1L1O75891 902 aa23.9■■□□□ 1.42
MAP1LC3B-203ENST00000562778 VIL1P09327 827 aaKnown RBP23.9■■□□□ 1.42
MAP1LC3B-203ENST00000562778 KLRK1P26718 216 aa23.9■■□□□ 1.42
MAP1LC3B-203ENST00000562778 RBM26Q5T8P6 1007 aaKnown RBP23.9■■□□□ 1.42
MAP1LC3B-203ENST00000562778 TXNRD3Q86VQ6 643 aa23.9■■□□□ 1.42
MAP1LC3B-203ENST00000562778 MED23Q9ULK4 1368 aa23.9■■□□□ 1.42
MAP1LC3B-203ENST00000562778 RPS12P25398 132 aaKnown RBP23.89■■□□□ 1.41
MAP1LC3B-203ENST00000562778 TRMT2AQ8IZ69 625 aaKnown RBP23.89■■□□□ 1.41
MAP1LC3B-203ENST00000562778 PGAP2Q9UHJ9 254 aa23.89■■□□□ 1.41
MAP1LC3B-203ENST00000562778 SNAP23O00161 211 aa23.88■■□□□ 1.41
MAP1LC3B-203ENST00000562778 NBPF7P0C2Y1 421 aaPredicted RBP23.88■■□□□ 1.41
MAP1LC3B-203ENST00000562778 CHRNDQ07001 517 aa23.88■■□□□ 1.41
MAP1LC3B-203ENST00000562778 IFIT5Q13325 482 aaKnown RBP23.88■■□□□ 1.41
MAP1LC3B-203ENST00000562778 CST9Q5W186 159 aa23.88■■□□□ 1.41
MAP1LC3B-203ENST00000562778 DLK2Q6UY11 383 aa23.88■■□□□ 1.41
MAP1LC3B-203ENST00000562778 ZNF594Q96JF6 807 aaPredicted RBP23.88■■□□□ 1.41
MAP1LC3B-203ENST00000562778 ABT1Q9ULW3 272 aaKnown RBP23.88■■□□□ 1.41
MAP1LC3B-203ENST00000562778 PSME4Q14997 1843 aa23.87■■□□□ 1.41
MAP1LC3B-203ENST00000562778 VEGFBP49765 207 aa23.87■■□□□ 1.41
MAP1LC3B-203ENST00000562778 RSBN1LQ6PCB5 846 aaPredicted RBP23.87■■□□□ 1.41
MAP1LC3B-203ENST00000562778 HELBQ8NG08 1087 aaPredicted RBP23.87■■□□□ 1.41
MAP1LC3B-203ENST00000562778 KAZALD1Q96I82 304 aa23.87■■□□□ 1.41
MAP1LC3B-203ENST00000562778 SUCLG2Q96I99 432 aa23.87■■□□□ 1.41
MAP1LC3B-203ENST00000562778 LEMD3Q9Y2U8 911 aa23.87■■□□□ 1.41
MAP1LC3B-203ENST00000562778 TRPM7Q96QT4 1865 aa23.87■■□□□ 1.41
MAP1LC3B-203ENST00000562778 ZNF804BA4D1E1 1349 aa23.86■■□□□ 1.41
MAP1LC3B-203ENST00000562778 TAF5LO75529 589 aa23.86■■□□□ 1.41
MAP1LC3B-203ENST00000562778 HSPA1AP0DMV8 641 aaKnown RBP23.86■■□□□ 1.41
MAP1LC3B-203ENST00000562778 HSPA1BP0DMV9 641 aaKnown RBP23.86■■□□□ 1.41
MAP1LC3B-203ENST00000562778 PODNQ7Z5L7 613 aa23.86■■□□□ 1.41
MAP1LC3B-203ENST00000562778 ZC3H15Q8WU90 426 aaKnown RBP23.86■■□□□ 1.41
MAP1LC3B-203ENST00000562778 MXD3Q9BW11 206 aa23.86■■□□□ 1.41
MAP1LC3B-203ENST00000562778 ANKRD2Q9GZV1 360 aa23.86■■□□□ 1.41
MAP1LC3B-203ENST00000562778 PTPRCP08575 1304 aa23.84■■□□□ 1.41
MAP1LC3B-203ENST00000562778 POLR2AP24928 1970 aaKnown RBP23.84■■□□□ 1.41
MAP1LC3B-203ENST00000562778 USP17L3A6NCW0 530 aa23.84■■□□□ 1.41
MAP1LC3B-203ENST00000562778 USP17L4A6NCW7 530 aa23.84■■□□□ 1.41
MAP1LC3B-203ENST00000562778 RASSF10A6NK89 507 aa23.84■■□□□ 1.41
MAP1LC3B-203ENST00000562778 CCDC57Q2TAC2 916 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms