RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 COL25A1Q9BXS0 654 aaPredicted RBP8.99□□□□□ -0.97
TCF4-213ENST00000562543 POGKQ9P215 609 aa8.99□□□□□ -0.97
TCF4-213ENST00000562543 PCDHB15Q9Y5E8 787 aa8.99□□□□□ -0.97
TCF4-213ENST00000562543 ACEP12821 1306 aa8.99□□□□□ -0.97
TCF4-213ENST00000562543 USP47Q96K76 1375 aa8.99□□□□□ -0.97
TCF4-213ENST00000562543 SOBPA7XYQ1 873 aa8.98□□□□□ -0.97
TCF4-213ENST00000562543 ZMYND10O75800 440 aa8.98□□□□□ -0.97
TCF4-213ENST00000562543 IL2RBP14784 551 aa8.98□□□□□ -0.97
TCF4-213ENST00000562543 SSFA2P28290 1259 aa8.98□□□□□ -0.97
TCF4-213ENST00000562543 CYP4F22Q6NT55 531 aa8.98□□□□□ -0.97
TCF4-213ENST00000562543 ABT1Q9ULW3 272 aaKnown RBP8.98□□□□□ -0.97
TCF4-213ENST00000562543 ROCK1Q13464 1354 aa8.98□□□□□ -0.97
TCF4-213ENST00000562543 HMGB2P26583 209 aaKnown RBP8.97□□□□□ -0.97
TCF4-213ENST00000562543 CTHP32929 405 aa8.97□□□□□ -0.97
TCF4-213ENST00000562543 MAP2K2P36507 400 aa8.97□□□□□ -0.97
TCF4-213ENST00000562543 NNTQ13423 1086 aa8.97□□□□□ -0.97
TCF4-213ENST00000562543 AK7Q96M32 723 aa8.97□□□□□ -0.97
TCF4-213ENST00000562543 CCDC87Q9NVE4 849 aa8.97□□□□□ -0.97
TCF4-213ENST00000562543 CFAP99D6REC4 459 aa8.96□□□□□ -0.98
TCF4-213ENST00000562543 AOC2O75106 756 aa8.96□□□□□ -0.98
TCF4-213ENST00000562543 LORP23490 312 aaPredicted RBP8.96□□□□□ -0.98
TCF4-213ENST00000562543 ARHGEF25Q86VW2 580 aa8.96□□□□□ -0.98
TCF4-213ENST00000562543 ZC3H15Q8WU90 426 aaKnown RBP8.96□□□□□ -0.98
TCF4-213ENST00000562543 NUDT16Q96DE0 195 aaKnown RBP8.96□□□□□ -0.98
TCF4-213ENST00000562543 TBC1D2Q9BYX2 928 aa8.96□□□□□ -0.98
TCF4-213ENST00000562543 ERBB4Q15303 1308 aa8.96□□□□□ -0.98
TCF4-213ENST00000562543 BRPF1P55201 1214 aaPredicted RBP8.95□□□□□ -0.98
TCF4-213ENST00000562543 AMHR2Q16671 573 aa8.95□□□□□ -0.98
TCF4-213ENST00000562543 FOXJ1Q92949 421 aa8.95□□□□□ -0.98
TCF4-213ENST00000562543 PURBQ96QR8 312 aaKnown RBP8.95□□□□□ -0.98
TCF4-213ENST00000562543 C14orf93Q9H972 538 aaKnown RBP8.95□□□□□ -0.98
TCF4-213ENST00000562543 PRDM6Q9NQX0 595 aa8.95□□□□□ -0.98
TCF4-213ENST00000562543 DLEC1Q9Y238 1755 aa8.94□□□□□ -0.98
TCF4-213ENST00000562543 VARSP26640 1264 aaKnown RBP8.94□□□□□ -0.98
TCF4-213ENST00000562543 GRM1Q13255 1194 aa8.94□□□□□ -0.98
TCF4-213ENST00000562543 MAP10Q9P2G4 905 aa8.94□□□□□ -0.98
TCF4-213ENST00000562543 ADGRB1O14514 1584 aa8.94□□□□□ -0.98
TCF4-213ENST00000562543 TRPM7Q96QT4 1865 aa8.94□□□□□ -0.98
TCF4-213ENST00000562543 CEP290O15078 2479 aa8.93□□□□□ -0.98
TCF4-213ENST00000562543 TIMP2P16035 220 aa8.93□□□□□ -0.98
TCF4-213ENST00000562543 WDR4P57081 412 aaKnown RBP8.93□□□□□ -0.98
TCF4-213ENST00000562543 ARID5BQ14865 1188 aa8.93□□□□□ -0.98
TCF4-213ENST00000562543 CSPP1Q1MSJ5 1256 aa8.93□□□□□ -0.98
TCF4-213ENST00000562543 DESI1Q6ICB0 168 aa8.93□□□□□ -0.98
TCF4-213ENST00000562543 RSBN1LQ6PCB5 846 aaPredicted RBP8.93□□□□□ -0.98
TCF4-213ENST00000562543 LYPD8Q6UX82 237 aa8.93□□□□□ -0.98
TCF4-213ENST00000562543 IRF7Q92985 503 aa8.93□□□□□ -0.98
TCF4-213ENST00000562543 TAF1DQ9H5J8 278 aaPredicted RBP8.93□□□□□ -0.98
TCF4-213ENST00000562543 NFAT5O94916 1531 aa8.93□□□□□ -0.98
TCF4-213ENST00000562543 MAP2P11137 1827 aaKnown RBP8.93□□□□□ -0.98
TCF4-213ENST00000562543 LAMA3Q16787 3333 aa8.92□□□□□ -0.98
TCF4-213ENST00000562543 PALLDQ8WX93 1383 aa8.92□□□□□ -0.98
TCF4-213ENST00000562543 PLEKHG3A1L390 1219 aa8.92□□□□□ -0.98
TCF4-213ENST00000562543 H3BM21 787 aa8.92□□□□□ -0.98
TCF4-213ENST00000562543 NFKBIEO00221 500 aa8.92□□□□□ -0.98
TCF4-213ENST00000562543 MRPL14Q6P1L8 145 aaKnown RBP8.92□□□□□ -0.98
TCF4-213ENST00000562543 PARP9Q8IXQ6 854 aa8.92□□□□□ -0.98
TCF4-213ENST00000562543 DDX54Q8TDD1 881 aaKnown RBP8.92□□□□□ -0.98
TCF4-213ENST00000562543 KLF16Q9BXK1 252 aaPredicted RBP8.92□□□□□ -0.98
TCF4-213ENST00000562543 LAMB4A4D0S4 1761 aa8.91□□□□□ -0.98
TCF4-213ENST00000562543 IQCA1LA6NCM1 817 aa8.91□□□□□ -0.98
TCF4-213ENST00000562543 SPDYE5A6NIY4 337 aa8.91□□□□□ -0.98
TCF4-213ENST00000562543 PER1O15534 1290 aaPredicted RBP8.91□□□□□ -0.98
TCF4-213ENST00000562543 PLA2G5P39877 138 aa8.91□□□□□ -0.98
TCF4-213ENST00000562543 CFAP70Q5T0N1 1121 aa8.91□□□□□ -0.98
TCF4-213ENST00000562543 MUC3AQ02505 3323 aa8.91□□□□□ -0.98
TCF4-213ENST00000562543 DDNO94850 711 aaPredicted RBP8.9□□□□□ -0.98
TCF4-213ENST00000562543 CHRNA5P30532 468 aa8.9□□□□□ -0.98
TCF4-213ENST00000562543 C4orf48Q5BLP8 95 aa8.9□□□□□ -0.98
TCF4-213ENST00000562543 CNTROBQ8N137 903 aa8.9□□□□□ -0.98
TCF4-213ENST00000562543 ZSCAN1Q8NBB4 408 aa8.9□□□□□ -0.98
TCF4-213ENST00000562543 ZFAND3Q9H8U3 227 aa8.9□□□□□ -0.98
TCF4-213ENST00000562543 DDX21Q9NR30 783 aaKnown RBP eCLIP8.9□□□□□ -0.98
TCF4-213ENST00000562543 FER1L6Q2WGJ9 1857 aa8.89□□□□□ -0.99
TCF4-213ENST00000562543 RBBP6Q7Z6E9 1792 aaKnown RBP8.89□□□□□ -0.99
TCF4-213ENST00000562543 CTU1Q7Z7A3 348 aaKnown RBP8.89□□□□□ -0.99
TCF4-213ENST00000562543 NLGN1Q8N2Q7 840 aa8.89□□□□□ -0.99
TCF4-213ENST00000562543 SNX27Q96L92 541 aa8.89□□□□□ -0.99
TCF4-213ENST00000562543 NLRP2Q9NX02 1062 aa8.89□□□□□ -0.99
TCF4-213ENST00000562543 SCN11AQ9UI33 1791 aa8.89□□□□□ -0.99
TCF4-213ENST00000562543 TRIM66O15016 1216 aa8.88□□□□□ -0.99
TCF4-213ENST00000562543 SPTLC1O15269 473 aa8.88□□□□□ -0.99
TCF4-213ENST00000562543 ADH1CP00326 375 aa8.88□□□□□ -0.99
TCF4-213ENST00000562543 F12P00748 615 aaPredicted RBP8.88□□□□□ -0.99
TCF4-213ENST00000562543 NR3C2P08235 984 aa8.88□□□□□ -0.99
TCF4-213ENST00000562543 SCARF1Q14162 830 aa8.88□□□□□ -0.99
TCF4-213ENST00000562543 EAPPQ56P03 285 aaPredicted RBP8.88□□□□□ -0.99
TCF4-213ENST00000562543 C6orf118Q5T5N4 469 aa8.88□□□□□ -0.99
TCF4-213ENST00000562543 MAP1SQ66K74 1059 aaPredicted RBP8.88□□□□□ -0.99
TCF4-213ENST00000562543 CIAPIN1Q6FI81 312 aa8.88□□□□□ -0.99
TCF4-213ENST00000562543 RIC3Q7Z5B4 369 aa8.88□□□□□ -0.99
TCF4-213ENST00000562543 FAM174AQ8TBP5 190 aa8.88□□□□□ -0.99
TCF4-213ENST00000562543 TSC1Q92574 1164 aa8.88□□□□□ -0.99
TCF4-213ENST00000562543 ITPKCQ96DU7 683 aa8.88□□□□□ -0.99
TCF4-213ENST00000562543 ZIC2O95409 532 aaPredicted RBP8.87□□□□□ -0.99
TCF4-213ENST00000562543 TMF1P82094 1093 aa8.87□□□□□ -0.99
TCF4-213ENST00000562543 FAM50AQ14320 339 aaKnown RBP8.87□□□□□ -0.99
TCF4-213ENST00000562543 AGERQ15109 404 aa8.87□□□□□ -0.99
TCF4-213ENST00000562543 ERFEQ4G0M1 354 aa8.87□□□□□ -0.99
TCF4-213ENST00000562543 NPAS3Q8IXF0 933 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms