RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 G3V3G9 751 aa24.18■■□□□ 1.46
KATNB1-202ENST00000562542 GPSM2P81274 684 aa24.18■■□□□ 1.46
KATNB1-202ENST00000562542 DCAF8Q5TAQ9 597 aa24.18■■□□□ 1.46
KATNB1-202ENST00000562542 CELF1Q92879 486 aaKnown RBP24.17■■□□□ 1.46
KATNB1-202ENST00000562542 ANGEL2Q5VTE6 544 aaKnown RBP24.16■■□□□ 1.46
KATNB1-202ENST00000562542 PLEKHF1Q96S99 279 aa24.16■■□□□ 1.46
KATNB1-202ENST00000562542 ZNF296Q8WUU4 475 aaPredicted RBP24.15■■□□□ 1.46
KATNB1-202ENST00000562542 TBC1D8O95759 1140 aa24.14■■□□□ 1.45
KATNB1-202ENST00000562542 SCARF1Q14162 830 aa24.14■■□□□ 1.45
KATNB1-202ENST00000562542 ZC3H12CQ9C0D7 883 aaKnown RBP24.14■■□□□ 1.45
KATNB1-202ENST00000562542 DDX60Q8IY21 1712 aaKnown RBP24.13■■□□□ 1.45
KATNB1-202ENST00000562542 VIL1P09327 827 aaKnown RBP24.13■■□□□ 1.45
KATNB1-202ENST00000562542 FKBP1BP68106 108 aa24.13■■□□□ 1.45
KATNB1-202ENST00000562542 TBC1D16Q8TBP0 767 aa24.13■■□□□ 1.45
KATNB1-202ENST00000562542 GCC1Q96CN9 775 aa24.13■■□□□ 1.45
KATNB1-202ENST00000562542 PNNQ9H307 717 aaKnown RBP24.13■■□□□ 1.45
KATNB1-202ENST00000562542 FAM89AQ96GI7 184 aa24.12■■□□□ 1.45
KATNB1-202ENST00000562542 SF3B3Q15393 1217 aaKnown RBP24.11■■□□□ 1.45
KATNB1-202ENST00000562542 RTL5Q5HYW3 569 aaPredicted RBP24.11■■□□□ 1.45
KATNB1-202ENST00000562542 PAPPA2Q9BXP8 1791 aa24.11■■□□□ 1.45
KATNB1-202ENST00000562542 MOB2Q70IA6 237 aa24.1■■□□□ 1.45
KATNB1-202ENST00000562542 UFL1O94874 794 aa24.09■■□□□ 1.45
KATNB1-202ENST00000562542 ZNF280AP59817 542 aaPredicted RBP24.09■■□□□ 1.45
KATNB1-202ENST00000562542 TTLL12Q14166 644 aaPredicted RBP24.09■■□□□ 1.45
KATNB1-202ENST00000562542 ANKIB1Q9P2G1 1089 aa24.09■■□□□ 1.45
KATNB1-202ENST00000562542 ATP5J2-PTCD1G3V325 749 aa24.08■■□□□ 1.45
KATNB1-202ENST00000562542 UBE2Q2LH0YL09 131 aa24.08■■□□□ 1.45
KATNB1-202ENST00000562542 RPS8P62241 208 aaKnown RBP24.08■■□□□ 1.45
KATNB1-202ENST00000562542 RSBN1LQ6PCB5 846 aaPredicted RBP24.08■■□□□ 1.45
KATNB1-202ENST00000562542 FBXO46Q6PJ61 603 aaPredicted RBP24.08■■□□□ 1.45
KATNB1-202ENST00000562542 GPR25O00155 361 aa24.07■■□□□ 1.44
KATNB1-202ENST00000562542 RIPK4P57078 832 aa24.07■■□□□ 1.44
KATNB1-202ENST00000562542 AGBL3Q8NEM8 1001 aa24.07■■□□□ 1.44
KATNB1-202ENST00000562542 BABAM1Q9NWV8 329 aa24.07■■□□□ 1.44
KATNB1-202ENST00000562542 SCAF8Q9UPN6 1271 aaKnown RBP24.07■■□□□ 1.44
KATNB1-202ENST00000562542 SCN9AQ15858 1988 aa24.06■■□□□ 1.44
KATNB1-202ENST00000562542 MKRN3Q13064 507 aaKnown RBP24.06■■□□□ 1.44
KATNB1-202ENST00000562542 PLBD2Q8NHP8 589 aa24.06■■□□□ 1.44
KATNB1-202ENST00000562542 MYOZ2Q9NPC6 264 aa24.06■■□□□ 1.44
KATNB1-202ENST00000562542 CHPF2Q9P2E5 772 aa24.06■■□□□ 1.44
KATNB1-202ENST00000562542 GGA1Q9UJY5 639 aa24.06■■□□□ 1.44
KATNB1-202ENST00000562542 COL4A1P02462 1669 aa24.05■■□□□ 1.44
KATNB1-202ENST00000562542 IRS4O14654 1257 aaPredicted RBP24.05■■□□□ 1.44
KATNB1-202ENST00000562542 USP17L8P0C7I0 530 aa24.05■■□□□ 1.44
KATNB1-202ENST00000562542 PITPNM2Q9BZ72 1349 aa24.05■■□□□ 1.44
KATNB1-202ENST00000562542 PRAMEF18Q5VWM3 479 aa24.04■■□□□ 1.44
KATNB1-202ENST00000562542 ANKRD13DQ6ZTN6 518 aa24.04■■□□□ 1.44
KATNB1-202ENST00000562542 ISCA1Q9BUE6 129 aa24.04■■□□□ 1.44
KATNB1-202ENST00000562542 PODXL2Q9NZ53 605 aa24.04■■□□□ 1.44
KATNB1-202ENST00000562542 FKTNO75072 461 aa24.03■■□□□ 1.44
KATNB1-202ENST00000562542 TM4SF4P48230 202 aa24.02■■□□□ 1.44
KATNB1-202ENST00000562542 LMOD3Q0VAK6 560 aa24.02■■□□□ 1.44
KATNB1-202ENST00000562542 SREBF2Q12772 1141 aa24.02■■□□□ 1.44
KATNB1-202ENST00000562542 KRT24Q2M2I5 525 aa24.02■■□□□ 1.44
KATNB1-202ENST00000562542 ZNF609O15014 1411 aa24.01■■□□□ 1.43
KATNB1-202ENST00000562542 NF2P35240 595 aa24.01■■□□□ 1.43
KATNB1-202ENST00000562542 NOM1Q5C9Z4 860 aaKnown RBP24.01■■□□□ 1.43
KATNB1-202ENST00000562542 HABP4Q5JVS0 413 aaKnown RBP24.01■■□□□ 1.43
KATNB1-202ENST00000562542 HDGFL1Q5TGJ6 251 aa24.01■■□□□ 1.43
KATNB1-202ENST00000562542 SEC31BQ9NQW1 1179 aa24.01■■□□□ 1.43
KATNB1-202ENST00000562542 LAS1LQ9Y4W2 734 aaKnown RBP24■■□□□ 1.43
KATNB1-202ENST00000562542 USP17L3A6NCW0 530 aa23.99■■□□□ 1.43
KATNB1-202ENST00000562542 USP17L4A6NCW7 530 aa23.99■■□□□ 1.43
KATNB1-202ENST00000562542 USP17L1Q7RTZ2 530 aa23.99■■□□□ 1.43
KATNB1-202ENST00000562542 GMLQ99445 158 aa23.99■■□□□ 1.43
KATNB1-202ENST00000562542 HSP90B1P14625 803 aaKnown RBP23.97■■□□□ 1.43
KATNB1-202ENST00000562542 NBPF9Q3BBW0 867 aa23.97■■□□□ 1.43
KATNB1-202ENST00000562542 DBF4Q9UBU7 674 aaPredicted RBP23.97■■□□□ 1.43
KATNB1-202ENST00000562542 PRKG1Q13976 671 aa23.96■■□□□ 1.43
KATNB1-202ENST00000562542 OGFOD1Q8N543 542 aa23.96■■□□□ 1.43
KATNB1-202ENST00000562542 R3HDMLQ9H3Y0 253 aa23.96■■□□□ 1.43
KATNB1-202ENST00000562542 XDHP47989 1333 aa23.95■■□□□ 1.42
KATNB1-202ENST00000562542 TMPOP42166 694 aaKnown RBP23.95■■□□□ 1.42
KATNB1-202ENST00000562542 CCDC152Q4G0S7 254 aa23.95■■□□□ 1.42
KATNB1-202ENST00000562542 ARMC9Q7Z3E5 817 aa23.95■■□□□ 1.42
KATNB1-202ENST00000562542 PODNQ7Z5L7 613 aa23.95■■□□□ 1.42
KATNB1-202ENST00000562542 ZBTB38Q8NAP3 1195 aaPredicted RBP23.95■■□□□ 1.42
KATNB1-202ENST00000562542 FBXW7Q969H0 707 aa23.95■■□□□ 1.42
KATNB1-202ENST00000562542 CCDC85AQ96PX6 553 aaPredicted RBP23.95■■□□□ 1.42
KATNB1-202ENST00000562542 TRIM17Q9Y577 477 aa23.95■■□□□ 1.42
KATNB1-202ENST00000562542 PTPN12Q05209 780 aaKnown RBP23.94■■□□□ 1.42
KATNB1-202ENST00000562542 TRIM28Q13263 835 aaKnown RBP23.94■■□□□ 1.42
KATNB1-202ENST00000562542 NEUROD2Q15784 382 aa23.94■■□□□ 1.42
KATNB1-202ENST00000562542 HYPKQ9NX55 129 aa23.94■■□□□ 1.42
KATNB1-202ENST00000562542 ATP2B4P23634 1241 aa23.93■■□□□ 1.42
KATNB1-202ENST00000562542 RIC3Q7Z5B4 369 aa23.93■■□□□ 1.42
KATNB1-202ENST00000562542 CFHR5Q9BXR6 569 aa23.93■■□□□ 1.42
KATNB1-202ENST00000562542 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.93■■□□□ 1.42
KATNB1-202ENST00000562542 PSME4Q14997 1843 aa23.92■■□□□ 1.42
KATNB1-202ENST00000562542 POTEFA5A3E0 1075 aa23.92■■□□□ 1.42
KATNB1-202ENST00000562542 CHL1O00533 1208 aa23.92■■□□□ 1.42
KATNB1-202ENST00000562542 ALDH1A1P00352 501 aa23.92■■□□□ 1.42
KATNB1-202ENST00000562542 INTS3Q68E01 1043 aaKnown RBP23.92■■□□□ 1.42
KATNB1-202ENST00000562542 ANKRD18AQ8IVF6 992 aa23.92■■□□□ 1.42
KATNB1-202ENST00000562542 WNT10BO00744 389 aa23.91■■□□□ 1.42
KATNB1-202ENST00000562542 GOLGA2Q08379 1002 aa23.91■■□□□ 1.42
KATNB1-202ENST00000562542 MXD3Q9BW11 206 aa23.91■■□□□ 1.42
KATNB1-202ENST00000562542 SASH1O94885 1247 aa23.9■■□□□ 1.42
KATNB1-202ENST00000562542 HOXB7P09629 217 aa23.9■■□□□ 1.42
KATNB1-202ENST00000562542 SPRYD7Q5W111 196 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms