RNA–Protein interactions for RNA: ENST00000562131.1

NIP7-203, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 4

Gene NIP7, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-203ENST00000562131 EYA3Q99504 573 aa12.2□□□□□ -0.46
NIP7-203ENST00000562131 ZC3H12CQ9C0D7 883 aaKnown RBP12.2□□□□□ -0.46
NIP7-203ENST00000562131 SUPT16HQ9Y5B9 1047 aaKnown RBP12.2□□□□□ -0.46
NIP7-203ENST00000562131 LTBP1Q14766 1721 aa12.2□□□□□ -0.46
NIP7-203ENST00000562131 CDHR2Q9BYE9 1310 aa12.19□□□□□ -0.46
NIP7-203ENST00000562131 G3V3G9 751 aa12.19□□□□□ -0.46
NIP7-203ENST00000562131 UFL1O94874 794 aa12.19□□□□□ -0.46
NIP7-203ENST00000562131 CTSWP56202 376 aa12.19□□□□□ -0.46
NIP7-203ENST00000562131 FMR1Q06787 632 aaKnown RBP eCLIP12.19□□□□□ -0.46
NIP7-203ENST00000562131 DCAF8Q5TAQ9 597 aa12.19□□□□□ -0.46
NIP7-203ENST00000562131 IFFO2Q5TF58 517 aa12.19□□□□□ -0.46
NIP7-203ENST00000562131 UBE3BQ7Z3V4 1068 aa12.19□□□□□ -0.46
NIP7-203ENST00000562131 ANKRD18AQ8IVF6 992 aa12.19□□□□□ -0.46
NIP7-203ENST00000562131 TTLL11Q8NHH1 800 aa12.19□□□□□ -0.46
NIP7-203ENST00000562131 KCNQ5Q9NR82 932 aa12.19□□□□□ -0.46
NIP7-203ENST00000562131 CNOT7Q9UIV1 285 aaKnown RBP12.19□□□□□ -0.46
NIP7-203ENST00000562131 GGA1Q9UJY5 639 aa12.19□□□□□ -0.46
NIP7-203ENST00000562131 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
NIP7-203ENST00000562131 DUOX1Q9NRD9 1551 aa12.18□□□□□ -0.46
NIP7-203ENST00000562131 SHTN1A0MZ66 631 aa12.18□□□□□ -0.46
NIP7-203ENST00000562131 H7C1D1 291 aa12.18□□□□□ -0.46
NIP7-203ENST00000562131 H7C1W4 665 aa12.18□□□□□ -0.46
NIP7-203ENST00000562131 PSMD14O00487 310 aa12.18□□□□□ -0.46
NIP7-203ENST00000562131 ECE2O60344 883 aa12.18□□□□□ -0.46
NIP7-203ENST00000562131 HSPA1AP0DMV8 641 aaKnown RBP12.18□□□□□ -0.46
NIP7-203ENST00000562131 HSPA1BP0DMV9 641 aaKnown RBP12.18□□□□□ -0.46
NIP7-203ENST00000562131 DNAAF4Q8WXU2 420 aa12.18□□□□□ -0.46
NIP7-203ENST00000562131 GREM2Q9H772 168 aa12.18□□□□□ -0.46
NIP7-203ENST00000562131 PODXL2Q9NZ53 605 aa12.18□□□□□ -0.46
NIP7-203ENST00000562131 ADAMTSL1Q8N6G6 1762 aa12.18□□□□□ -0.46
NIP7-203ENST00000562131 TRAF5O00463 557 aa12.17□□□□□ -0.46
NIP7-203ENST00000562131 GCKRQ14397 625 aa12.17□□□□□ -0.46
NIP7-203ENST00000562131 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.17□□□□□ -0.46
NIP7-203ENST00000562131 CDC5LQ99459 802 aaKnown RBP12.17□□□□□ -0.46
NIP7-203ENST00000562131 ABT1Q9ULW3 272 aaKnown RBP12.17□□□□□ -0.46
NIP7-203ENST00000562131 LRRC37AA6NMS7 1700 aa12.17□□□□□ -0.46
NIP7-203ENST00000562131 CNTNAP1P78357 1384 aa12.17□□□□□ -0.46
NIP7-203ENST00000562131 F6X3S4 739 aa12.16□□□□□ -0.46
NIP7-203ENST00000562131 VEGFBP49765 207 aa12.16□□□□□ -0.46
NIP7-203ENST00000562131 HIRAP54198 1017 aaPredicted RBP12.16□□□□□ -0.46
NIP7-203ENST00000562131 RRP1P56182 461 aaKnown RBP12.16□□□□□ -0.46
NIP7-203ENST00000562131 DEFB115Q30KQ5 88 aa12.16□□□□□ -0.46
NIP7-203ENST00000562131 MICALL2Q8IY33 904 aa12.16□□□□□ -0.46
NIP7-203ENST00000562131 TRPM4Q8TD43 1214 aa12.16□□□□□ -0.46
NIP7-203ENST00000562131 XDHP47989 1333 aa12.15□□□□□ -0.46
NIP7-203ENST00000562131 WTIPA6NIX2 430 aaPredicted RBP12.15□□□□□ -0.46
NIP7-203ENST00000562131 TBC1D10BQ4KMP7 808 aaPredicted RBP12.15□□□□□ -0.46
NIP7-203ENST00000562131 RBM26Q5T8P6 1007 aaKnown RBP12.15□□□□□ -0.46
NIP7-203ENST00000562131 COL13A1Q5TAT6 717 aaPredicted RBP12.15□□□□□ -0.46
NIP7-203ENST00000562131 SAMD7Q7Z3H4 446 aa12.15□□□□□ -0.46
NIP7-203ENST00000562131 LINS1Q8NG48 757 aa12.15□□□□□ -0.46
NIP7-203ENST00000562131 DPF2Q92785 391 aa12.15□□□□□ -0.46
NIP7-203ENST00000562131 GLIS2Q9BZE0 524 aaPredicted RBP12.15□□□□□ -0.46
NIP7-203ENST00000562131 MINPP1Q9UNW1 487 aa12.15□□□□□ -0.46
NIP7-203ENST00000562131 RASSF10A6NK89 507 aa12.14□□□□□ -0.47
NIP7-203ENST00000562131 ATP2B4P23634 1241 aa12.14□□□□□ -0.47
NIP7-203ENST00000562131 IGHMBP2P38935 993 aaKnown RBP12.14□□□□□ -0.47
NIP7-203ENST00000562131 RARSP54136 660 aaKnown RBP12.14□□□□□ -0.47
NIP7-203ENST00000562131 CASP7P55210 303 aa12.14□□□□□ -0.47
NIP7-203ENST00000562131 CST9Q5W186 159 aa12.14□□□□□ -0.47
NIP7-203ENST00000562131 PAXIP1Q6ZW49 1069 aaPredicted RBP12.14□□□□□ -0.47
NIP7-203ENST00000562131 ZC3H15Q8WU90 426 aaKnown RBP12.14□□□□□ -0.47
NIP7-203ENST00000562131 SMC4Q9NTJ3 1288 aa12.14□□□□□ -0.47
NIP7-203ENST00000562131 BSDC1Q9NW68 430 aaPredicted RBP12.14□□□□□ -0.47
NIP7-203ENST00000562131 PGAP2Q9UHJ9 254 aa12.14□□□□□ -0.47
NIP7-203ENST00000562131 RTL9Q8NET4 1388 aa12.14□□□□□ -0.47
NIP7-203ENST00000562131 CELF2O95319 508 aaKnown RBP12.13□□□□□ -0.47
NIP7-203ENST00000562131 VIL1P09327 827 aaKnown RBP12.13□□□□□ -0.47
NIP7-203ENST00000562131 ITGA6P23229 1130 aa12.13□□□□□ -0.47
NIP7-203ENST00000562131 RPS12P25398 132 aaKnown RBP12.13□□□□□ -0.47
NIP7-203ENST00000562131 GRM1Q13255 1194 aa12.13□□□□□ -0.47
NIP7-203ENST00000562131 FAM161AQ3B820 660 aa12.13□□□□□ -0.47
NIP7-203ENST00000562131 ALDH1L2Q3SY69 923 aa12.13□□□□□ -0.47
NIP7-203ENST00000562131 CDC37L1Q7L3B6 337 aa12.13□□□□□ -0.47
NIP7-203ENST00000562131 USP48Q86UV5 1035 aa12.13□□□□□ -0.47
NIP7-203ENST00000562131 PLA2G12BQ9BX93 195 aa12.13□□□□□ -0.47
NIP7-203ENST00000562131 ZNF408Q9H9D4 720 aa12.13□□□□□ -0.47
NIP7-203ENST00000562131 KIF16BQ96L93 1317 aa12.12□□□□□ -0.47
NIP7-203ENST00000562131 EGFRP00533 1210 aa12.12□□□□□ -0.47
NIP7-203ENST00000562131 CSF1RP07333 972 aa12.12□□□□□ -0.47
NIP7-203ENST00000562131 CCT4P50991 539 aaKnown RBP12.12□□□□□ -0.47
NIP7-203ENST00000562131 BEND3Q5T5X7 828 aa12.12□□□□□ -0.47
NIP7-203ENST00000562131 SLC4A10Q6U841 1118 aa12.12□□□□□ -0.47
NIP7-203ENST00000562131 MPHOSPH8Q99549 860 aa12.12□□□□□ -0.47
NIP7-203ENST00000562131 CHMP3Q9Y3E7 222 aa12.12□□□□□ -0.47
NIP7-203ENST00000562131 GTF3C3Q9Y5Q9 886 aa12.12□□□□□ -0.47
NIP7-203ENST00000562131 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
NIP7-203ENST00000562131 BCAR3O75815 825 aa12.11□□□□□ -0.47
NIP7-203ENST00000562131 CYP4F22Q6NT55 531 aa12.11□□□□□ -0.47
NIP7-203ENST00000562131 RSBN1LQ6PCB5 846 aaPredicted RBP12.11□□□□□ -0.47
NIP7-203ENST00000562131 DLK2Q6UY11 383 aa12.11□□□□□ -0.47
NIP7-203ENST00000562131 PODNQ7Z5L7 613 aa12.11□□□□□ -0.47
NIP7-203ENST00000562131 ANKRD18BA2A2Z9 1011 aa12.1□□□□□ -0.47
NIP7-203ENST00000562131 USP17L3A6NCW0 530 aa12.1□□□□□ -0.47
NIP7-203ENST00000562131 USP17L4A6NCW7 530 aa12.1□□□□□ -0.47
NIP7-203ENST00000562131 FOXN1O15353 648 aa12.1□□□□□ -0.47
NIP7-203ENST00000562131 FOXO4P98177 505 aa12.1□□□□□ -0.47
NIP7-203ENST00000562131 USP17L1Q7RTZ2 530 aa12.1□□□□□ -0.47
NIP7-203ENST00000562131 SSH1Q8WYL5 1049 aa12.1□□□□□ -0.47
NIP7-203ENST00000562131 FRAT1Q92837 279 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms