RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 TIAM2Q8IVF5 1701 aa17.46■□□□□ 0.39
IFT140-205ENST00000561954 TAF1P21675 1872 aa17.46■□□□□ 0.38
IFT140-205ENST00000561954 CHD4Q14839 1912 aa17.45■□□□□ 0.38
IFT140-205ENST00000561954 LDHAL6AQ6ZMR3 332 aa17.45■□□□□ 0.38
IFT140-205ENST00000561954 EYA3Q99504 573 aa17.45■□□□□ 0.38
IFT140-205ENST00000561954 CNNM1Q9NRU3 951 aa17.45■□□□□ 0.38
IFT140-205ENST00000561954 GGA1Q9UJY5 639 aa17.45■□□□□ 0.38
IFT140-205ENST00000561954 FBXO3Q9UK99 471 aa17.45■□□□□ 0.38
IFT140-205ENST00000561954 NSFL1CQ9UNZ2 370 aaKnown RBP17.45■□□□□ 0.38
IFT140-205ENST00000561954 SRGAP3O43295 1099 aa17.44■□□□□ 0.38
IFT140-205ENST00000561954 IARSP41252 1262 aaKnown RBP17.44■□□□□ 0.38
IFT140-205ENST00000561954 GPSM2P81274 684 aa17.44■□□□□ 0.38
IFT140-205ENST00000561954 C20orf194Q5TEA3 1177 aa17.44■□□□□ 0.38
IFT140-205ENST00000561954 C9orf131Q5VYM1 1079 aa17.44■□□□□ 0.38
IFT140-205ENST00000561954 MINPP1Q9UNW1 487 aa17.44■□□□□ 0.38
IFT140-205ENST00000561954 UFL1O94874 794 aa17.43■□□□□ 0.38
IFT140-205ENST00000561954 ATP2B4P23634 1241 aa17.43■□□□□ 0.38
IFT140-205ENST00000561954 ZNF277Q9NRM2 450 aaPredicted RBP17.43■□□□□ 0.38
IFT140-205ENST00000561954 MROH5Q6ZUA9 1318 aa17.43■□□□□ 0.38
IFT140-205ENST00000561954 C6orf229H3BNL8 230 aa17.42■□□□□ 0.38
IFT140-205ENST00000561954 PPIP5K2O43314 1243 aa17.42■□□□□ 0.38
IFT140-205ENST00000561954 KCNJ4P48050 445 aa17.42■□□□□ 0.38
IFT140-205ENST00000561954 SLC51AQ86UW1 340 aa17.42■□□□□ 0.38
IFT140-205ENST00000561954 ZNF594Q96JF6 807 aaPredicted RBP17.42■□□□□ 0.38
IFT140-205ENST00000561954 LEMD3Q9Y2U8 911 aa17.42■□□□□ 0.38
IFT140-205ENST00000561954 MED23Q9ULK4 1368 aa17.41■□□□□ 0.38
IFT140-205ENST00000561954 CIAO1O76071 339 aa17.41■□□□□ 0.38
IFT140-205ENST00000561954 RFX5P48382 616 aaPredicted RBP17.41■□□□□ 0.38
IFT140-205ENST00000561954 CHRNDQ07001 517 aa17.41■□□□□ 0.38
IFT140-205ENST00000561954 KIAA2012Q0VF49 1180 aa17.41■□□□□ 0.38
IFT140-205ENST00000561954 LARGE2Q8N3Y3 721 aa17.41■□□□□ 0.38
IFT140-205ENST00000561954 TBC1D16Q8TBP0 767 aa17.41■□□□□ 0.38
IFT140-205ENST00000561954 JDP2Q8WYK2 163 aa17.41■□□□□ 0.38
IFT140-205ENST00000561954 C1orf115Q9H7X2 142 aa17.41■□□□□ 0.38
IFT140-205ENST00000561954 ZBTB40Q9NUA8 1239 aa17.41■□□□□ 0.38
IFT140-205ENST00000561954 A0A1B0GUL6 1792 aa17.4■□□□□ 0.38
IFT140-205ENST00000561954 PTPN12Q05209 780 aaKnown RBP17.4■□□□□ 0.38
IFT140-205ENST00000561954 WASHC4Q2M389 1173 aa17.4■□□□□ 0.38
IFT140-205ENST00000561954 NIM1KQ8IY84 436 aa17.4■□□□□ 0.38
IFT140-205ENST00000561954 COPRSQ9NQ92 184 aa17.4■□□□□ 0.38
IFT140-205ENST00000561954 SBF1O95248 1867 aa17.39■□□□□ 0.38
IFT140-205ENST00000561954 EYA2O00167 538 aa17.39■□□□□ 0.37
IFT140-205ENST00000561954 YY1P25490 414 aa17.39■□□□□ 0.37
IFT140-205ENST00000561954 AOC3Q16853 763 aa17.39■□□□□ 0.37
IFT140-205ENST00000561954 METTL24Q5JXM2 366 aa17.39■□□□□ 0.37
IFT140-205ENST00000561954 CEP85Q6P2H3 762 aa17.39■□□□□ 0.37
IFT140-205ENST00000561954 ZC3H12CQ9C0D7 883 aaKnown RBP17.39■□□□□ 0.37
IFT140-205ENST00000561954 POLLQ9UGP5 575 aa17.39■□□□□ 0.37
IFT140-205ENST00000561954 ZNF804BA4D1E1 1349 aa17.39■□□□□ 0.37
IFT140-205ENST00000561954 DICER1Q9UPY3 1922 aaKnown RBP17.39■□□□□ 0.37
IFT140-205ENST00000561954 HMMRO75330 724 aa17.38■□□□□ 0.37
IFT140-205ENST00000561954 IL15P40933 162 aaPredicted RBP17.38■□□□□ 0.37
IFT140-205ENST00000561954 PRELPP51888 382 aa17.38■□□□□ 0.37
IFT140-205ENST00000561954 AAMPQ13685 434 aa17.38■□□□□ 0.37
IFT140-205ENST00000561954 KLHDC4Q8TBB5 520 aa17.38■□□□□ 0.37
IFT140-205ENST00000561954 SSH3Q8TE77 659 aa17.38■□□□□ 0.37
IFT140-205ENST00000561954 RIPOR2Q9Y4F9 1068 aa17.38■□□□□ 0.37
IFT140-205ENST00000561954 PNMA6EA0A0J9YXQ4 647 aa17.37■□□□□ 0.37
IFT140-205ENST00000561954 ATP8B2P98198 1209 aa17.37■□□□□ 0.37
IFT140-205ENST00000561954 POLA2Q14181 598 aa17.37■□□□□ 0.37
IFT140-205ENST00000561954 RPAP2Q8IXW5 612 aaPredicted RBP17.37■□□□□ 0.37
IFT140-205ENST00000561954 SIL1Q9H173 461 aa17.37■□□□□ 0.37
IFT140-205ENST00000561954 SUPT16HQ9Y5B9 1047 aaKnown RBP17.37■□□□□ 0.37
IFT140-205ENST00000561954 G3V3G9 751 aa17.36■□□□□ 0.37
IFT140-205ENST00000561954 LRRC24Q50LG9 513 aa17.36■□□□□ 0.37
IFT140-205ENST00000561954 DCAF8Q5TAQ9 597 aa17.36■□□□□ 0.37
IFT140-205ENST00000561954 PUS3Q9BZE2 481 aaKnown RBP17.36■□□□□ 0.37
IFT140-205ENST00000561954 COL4A5P29400 1685 aa17.36■□□□□ 0.37
IFT140-205ENST00000561954 PDE8BO95263 885 aa17.35■□□□□ 0.37
IFT140-205ENST00000561954 CENPBP07199 599 aaPredicted RBP17.35■□□□□ 0.37
IFT140-205ENST00000561954 EIF6P56537 245 aaKnown RBP17.35■□□□□ 0.37
IFT140-205ENST00000561954 UBE4AQ14139 1066 aa17.35■□□□□ 0.37
IFT140-205ENST00000561954 PUM3Q15397 648 aaKnown RBP17.35■□□□□ 0.37
IFT140-205ENST00000561954 C15orf52Q6ZUT6 534 aaKnown RBP17.35■□□□□ 0.37
IFT140-205ENST00000561954 ZNRF3Q9ULT6 936 aa17.35■□□□□ 0.37
IFT140-205ENST00000561954 PA2G4Q9UQ80 394 aaKnown RBP17.35■□□□□ 0.37
IFT140-205ENST00000561954 KDM2BQ8NHM5 1336 aa17.35■□□□□ 0.37
IFT140-205ENST00000561954 FZD9O00144 591 aa17.34■□□□□ 0.37
IFT140-205ENST00000561954 TAF5LO75529 589 aa17.34■□□□□ 0.37
IFT140-205ENST00000561954 DPY19L2Q6NUT2 758 aa17.34■□□□□ 0.37
IFT140-205ENST00000561954 ATG9AQ7Z3C6 839 aa17.34■□□□□ 0.37
IFT140-205ENST00000561954 VGLL2Q8N8G2 317 aa17.34■□□□□ 0.37
IFT140-205ENST00000561954 HELBQ8NG08 1087 aaPredicted RBP17.34■□□□□ 0.37
IFT140-205ENST00000561954 CRBNQ96SW2 442 aa17.34■□□□□ 0.37
IFT140-205ENST00000561954 CEP126Q9P2H0 1117 aa17.34■□□□□ 0.37
IFT140-205ENST00000561954 RIMBP2O15034 1052 aa17.33■□□□□ 0.36
IFT140-205ENST00000561954 ECE2O60344 883 aa17.33■□□□□ 0.36
IFT140-205ENST00000561954 G3BP1Q13283 466 aaKnown RBP eCLIP17.33■□□□□ 0.36
IFT140-205ENST00000561954 OS9Q13438 667 aaPredicted RBP17.33■□□□□ 0.36
IFT140-205ENST00000561954 HSP90AB4PQ58FF6 505 aa17.33■□□□□ 0.36
IFT140-205ENST00000561954 ZNF804AQ7Z570 1209 aa17.33■□□□□ 0.36
IFT140-205ENST00000561954 GPR101Q96P66 508 aaPredicted RBP17.33■□□□□ 0.36
IFT140-205ENST00000561954 IFIT1P09914 478 aaKnown RBP17.32■□□□□ 0.36
IFT140-205ENST00000561954 SLC5A1P13866 664 aa17.32■□□□□ 0.36
IFT140-205ENST00000561954 ERC1Q8IUD2 1116 aa17.32■□□□□ 0.36
IFT140-205ENST00000561954 COA1Q9GZY4 146 aa17.32■□□□□ 0.36
IFT140-205ENST00000561954 AKAP2Q9Y2D5 859 aa17.32■□□□□ 0.36
IFT140-205ENST00000561954 CCDC88AQ3V6T2 1871 aa17.32■□□□□ 0.36
IFT140-205ENST00000561954 ZNF541Q9H0D2 1346 aa17.31■□□□□ 0.36
IFT140-205ENST00000561954 GLTPD2A6NH11 291 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms