RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 CCDC27Q2M243 656 aa18.8■□□□□ 0.6
SPG7-205ENST00000561945 NCBP3Q53F19 620 aaKnown RBP18.8■□□□□ 0.6
SPG7-205ENST00000561945 CCDC30Q5VVM6 783 aa18.8■□□□□ 0.6
SPG7-205ENST00000561945 MYD88Q99836 296 aa18.8■□□□□ 0.6
SPG7-205ENST00000561945 SEC31BQ9NQW1 1179 aa18.8■□□□□ 0.6
SPG7-205ENST00000561945 CWC25Q9NXE8 425 aaPredicted RBP18.8■□□□□ 0.6
SPG7-205ENST00000561945 ZNF646O15015 1829 aaPredicted RBP18.79■□□□□ 0.6
SPG7-205ENST00000561945 POLR2AP24928 1970 aaKnown RBP18.79■□□□□ 0.6
SPG7-205ENST00000561945 ELL2O00472 640 aaPredicted RBP18.79■□□□□ 0.6
SPG7-205ENST00000561945 RIMBP2O15034 1052 aa18.79■□□□□ 0.6
SPG7-205ENST00000561945 VIL1P09327 827 aaKnown RBP18.79■□□□□ 0.6
SPG7-205ENST00000561945 CCDC152Q4G0S7 254 aa18.79■□□□□ 0.6
SPG7-205ENST00000561945 KCNQ5Q9NR82 932 aa18.79■□□□□ 0.6
SPG7-205ENST00000561945 DDX58O95786 925 aaKnown RBP18.78■□□□□ 0.6
SPG7-205ENST00000561945 EGFRP00533 1210 aa18.78■□□□□ 0.6
SPG7-205ENST00000561945 BRPF1P55201 1214 aaPredicted RBP18.78■□□□□ 0.6
SPG7-205ENST00000561945 SAMD7Q7Z3H4 446 aa18.78■□□□□ 0.6
SPG7-205ENST00000561945 CA12O43570 354 aa18.77■□□□□ 0.6
SPG7-205ENST00000561945 DOK7Q18PE1 504 aa18.77■□□□□ 0.6
SPG7-205ENST00000561945 KSR2Q6VAB6 950 aa18.77■□□□□ 0.6
SPG7-205ENST00000561945 TSPYL6Q8N831 410 aa18.77■□□□□ 0.6
SPG7-205ENST00000561945 ZC3H12CQ9C0D7 883 aaKnown RBP18.77■□□□□ 0.6
SPG7-205ENST00000561945 AOC2O75106 756 aa18.76■□□□□ 0.59
SPG7-205ENST00000561945 IGKV5-2P06315 115 aa18.76■□□□□ 0.59
SPG7-205ENST00000561945 PAXIP1Q6ZW49 1069 aaPredicted RBP18.76■□□□□ 0.59
SPG7-205ENST00000561945 USP48Q86UV5 1035 aa18.76■□□□□ 0.59
SPG7-205ENST00000561945 BEGAINQ9BUH8 593 aa18.76■□□□□ 0.59
SPG7-205ENST00000561945 GGA1Q9UJY5 639 aa18.76■□□□□ 0.59
SPG7-205ENST00000561945 CACNA1FO60840 1977 aa18.75■□□□□ 0.59
SPG7-205ENST00000561945 ZNF280AP59817 542 aaPredicted RBP18.75■□□□□ 0.59
SPG7-205ENST00000561945 TBC1D10BQ4KMP7 808 aaPredicted RBP18.75■□□□□ 0.59
SPG7-205ENST00000561945 DLK2Q6UY11 383 aa18.75■□□□□ 0.59
SPG7-205ENST00000561945 MAP3K2Q9Y2U5 619 aa18.75■□□□□ 0.59
SPG7-205ENST00000561945 XDHP47989 1333 aa18.74■□□□□ 0.59
SPG7-205ENST00000561945 UFL1O94874 794 aa18.74■□□□□ 0.59
SPG7-205ENST00000561945 AGBL3Q8NEM8 1001 aa18.74■□□□□ 0.59
SPG7-205ENST00000561945 ABHD8Q96I13 439 aa18.74■□□□□ 0.59
SPG7-205ENST00000561945 GMLQ99445 158 aa18.74■□□□□ 0.59
SPG7-205ENST00000561945 ANKIB1Q9P2G1 1089 aa18.74■□□□□ 0.59
SPG7-205ENST00000561945 SPEF2Q9C093 1822 aa18.74■□□□□ 0.59
SPG7-205ENST00000561945 IL16Q14005 1332 aa18.74■□□□□ 0.59
SPG7-205ENST00000561945 PI4KAP2A4QPH2 592 aa18.73■□□□□ 0.59
SPG7-205ENST00000561945 CTSWP56202 376 aa18.73■□□□□ 0.59
SPG7-205ENST00000561945 NOGQ13253 232 aa18.73■□□□□ 0.59
SPG7-205ENST00000561945 KRT26Q7Z3Y9 468 aa18.73■□□□□ 0.59
SPG7-205ENST00000561945 ANKRD18AQ8IVF6 992 aa18.73■□□□□ 0.59
SPG7-205ENST00000561945 WWC1Q8IX03 1113 aa18.73■□□□□ 0.59
SPG7-205ENST00000561945 PI4KAP1Q8N8J0 262 aa18.73■□□□□ 0.59
SPG7-205ENST00000561945 TTLL11Q8NHH1 800 aa18.73■□□□□ 0.59
SPG7-205ENST00000561945 MED23Q9ULK4 1368 aa18.72■□□□□ 0.59
SPG7-205ENST00000561945 FAM155AB1AL88 458 aaPredicted RBP18.72■□□□□ 0.59
SPG7-205ENST00000561945 ATP2B4P23634 1241 aa18.72■□□□□ 0.59
SPG7-205ENST00000561945 GRM1Q13255 1194 aa18.72■□□□□ 0.59
SPG7-205ENST00000561945 KIF4BQ2VIQ3 1234 aa18.72■□□□□ 0.59
SPG7-205ENST00000561945 CCDC184Q52MB2 194 aa18.72■□□□□ 0.59
SPG7-205ENST00000561945 RSBN1LQ6PCB5 846 aaPredicted RBP18.72■□□□□ 0.59
SPG7-205ENST00000561945 PODNQ7Z5L7 613 aa18.72■□□□□ 0.59
SPG7-205ENST00000561945 DCPSQ96C86 337 aaKnown RBP18.72■□□□□ 0.59
SPG7-205ENST00000561945 ZNF408Q9H9D4 720 aa18.72■□□□□ 0.59
SPG7-205ENST00000561945 HUNKP57058 714 aa18.71■□□□□ 0.59
SPG7-205ENST00000561945 JARID2Q92833 1246 aaPredicted RBP18.71■□□□□ 0.59
SPG7-205ENST00000561945 TSR2Q969E8 191 aaKnown RBP18.71■□□□□ 0.59
SPG7-205ENST00000561945 CDC5LQ99459 802 aaKnown RBP18.71■□□□□ 0.59
SPG7-205ENST00000561945 BSDC1Q9NW68 430 aaPredicted RBP18.71■□□□□ 0.59
SPG7-205ENST00000561945 TSKSQ9UJT2 592 aa18.71■□□□□ 0.59
SPG7-205ENST00000561945 NEURL1BA8MQ27 555 aa18.7■□□□□ 0.58
SPG7-205ENST00000561945 ADM5C9JUS6 153 aa18.7■□□□□ 0.58
SPG7-205ENST00000561945 H7C1W4 665 aa18.7■□□□□ 0.58
SPG7-205ENST00000561945 TWISTNBQ3B726 338 aaPredicted RBP18.7■□□□□ 0.58
SPG7-205ENST00000561945 RGMBQ6NW40 437 aa18.7■□□□□ 0.58
SPG7-205ENST00000561945 PLA2G12BQ9BX93 195 aa18.7■□□□□ 0.58
SPG7-205ENST00000561945 STK31Q9BXU1 1019 aa18.7■□□□□ 0.58
SPG7-205ENST00000561945 GBA2Q9HCG7 927 aaPredicted RBP18.7■□□□□ 0.58
SPG7-205ENST00000561945 NEXNQ0ZGT2 675 aa18.69■□□□□ 0.58
SPG7-205ENST00000561945 MINPP1Q9UNW1 487 aa18.69■□□□□ 0.58
SPG7-205ENST00000561945 PITPNM2Q9BZ72 1349 aa18.69■□□□□ 0.58
SPG7-205ENST00000561945 RBM26Q5T8P6 1007 aaKnown RBP18.68■□□□□ 0.58
SPG7-205ENST00000561945 G2E3Q7L622 706 aa18.68■□□□□ 0.58
SPG7-205ENST00000561945 C2orf69Q8N8R5 385 aa18.68■□□□□ 0.58
SPG7-205ENST00000561945 CCDC102AQ96A19 550 aa18.68■□□□□ 0.58
SPG7-205ENST00000561945 CCDC85AQ96PX6 553 aaPredicted RBP18.68■□□□□ 0.58
SPG7-205ENST00000561945 ZIC5Q96T25 663 aa18.68■□□□□ 0.58
SPG7-205ENST00000561945 GREM2Q9H772 168 aa18.68■□□□□ 0.58
SPG7-205ENST00000561945 GGA3Q9NZ52 723 aa18.68■□□□□ 0.58
SPG7-205ENST00000561945 ASTN2O75129 1339 aaPredicted RBP18.68■□□□□ 0.58
SPG7-205ENST00000561945 CASP8AP2Q9UKL3 1982 aa18.68■□□□□ 0.58
SPG7-205ENST00000561945 PAPPA2Q9BXP8 1791 aa18.68■□□□□ 0.58
SPG7-205ENST00000561945 USP17L3A6NCW0 530 aa18.67■□□□□ 0.58
SPG7-205ENST00000561945 USP17L4A6NCW7 530 aa18.67■□□□□ 0.58
SPG7-205ENST00000561945 G3V3G9 751 aa18.67■□□□□ 0.58
SPG7-205ENST00000561945 SLC4A2P04920 1241 aa18.67■□□□□ 0.58
SPG7-205ENST00000561945 CASP7P55210 303 aa18.67■□□□□ 0.58
SPG7-205ENST00000561945 CWF19L2Q2TBE0 894 aaKnown RBP18.67■□□□□ 0.58
SPG7-205ENST00000561945 DCAF8Q5TAQ9 597 aa18.67■□□□□ 0.58
SPG7-205ENST00000561945 USP17L1Q7RTZ2 530 aa18.67■□□□□ 0.58
SPG7-205ENST00000561945 SULF1Q8IWU6 871 aa18.67■□□□□ 0.58
SPG7-205ENST00000561945 SAGE1Q9NXZ1 904 aa18.67■□□□□ 0.58
SPG7-205ENST00000561945 A0A1B0GUL6 1792 aa18.66■□□□□ 0.58
SPG7-205ENST00000561945 WTIPA6NIX2 430 aaPredicted RBP18.66■□□□□ 0.58
SPG7-205ENST00000561945 CSF1RP07333 972 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms