RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 CENPQQ7L2Z9 268 aaPredicted RBP28.83■■■□□ 2.21
TMEM249-201ENST00000561638 TTLL6Q8N841 843 aa28.83■■■□□ 2.21
TMEM249-201ENST00000561638 WWC3Q9ULE0 1092 aa28.83■■■□□ 2.21
TMEM249-201ENST00000561638 RAB11FIP3O75154 756 aa28.82■■■□□ 2.2
TMEM249-201ENST00000561638 METTL24Q5JXM2 366 aa28.82■■■□□ 2.2
TMEM249-201ENST00000561638 TMC4Q7Z404 712 aa28.82■■■□□ 2.2
TMEM249-201ENST00000561638 NLGN2Q8NFZ4 835 aa28.82■■■□□ 2.2
TMEM249-201ENST00000561638 LRP5O75197 1615 aa28.82■■■□□ 2.2
TMEM249-201ENST00000561638 DLEC1Q9Y238 1755 aa28.81■■■□□ 2.2
TMEM249-201ENST00000561638 KCNA3P22001 575 aa28.81■■■□□ 2.2
TMEM249-201ENST00000561638 ATG9AQ7Z3C6 839 aa28.81■■■□□ 2.2
TMEM249-201ENST00000561638 SMC5Q8IY18 1101 aa28.8■■■□□ 2.2
TMEM249-201ENST00000561638 RIPOR2Q9Y4F9 1068 aa28.8■■■□□ 2.2
TMEM249-201ENST00000561638 MROH5Q6ZUA9 1318 aa28.8■■■□□ 2.2
TMEM249-201ENST00000561638 LRRCC1Q9C099 1032 aa28.8■■■□□ 2.2
TMEM249-201ENST00000561638 KIF1BPQ96EK5 621 aa28.79■■■□□ 2.2
TMEM249-201ENST00000561638 CEP126Q9P2H0 1117 aa28.79■■■□□ 2.2
TMEM249-201ENST00000561638 CACNA1SQ13698 1873 aa28.79■■■□□ 2.2
TMEM249-201ENST00000561638 KIAA1551Q9HCM1 1747 aa28.79■■■□□ 2.2
TMEM249-201ENST00000561638 GOLGB1Q14789 3259 aaKnown RBP28.78■■■□□ 2.2
TMEM249-201ENST00000561638 CHRNDQ07001 517 aa28.78■■■□□ 2.2
TMEM249-201ENST00000561638 SYT17Q9BSW7 474 aa28.78■■■□□ 2.2
TMEM249-201ENST00000561638 ZNF219Q9P2Y4 722 aaPredicted RBP28.78■■■□□ 2.2
TMEM249-201ENST00000561638 MINPP1Q9UNW1 487 aa28.78■■■□□ 2.2
TMEM249-201ENST00000561638 KDM2BQ8NHM5 1336 aa28.78■■■□□ 2.2
TMEM249-201ENST00000561638 DALRD3Q5D0E6 543 aaKnown RBP28.78■■■□□ 2.2
TMEM249-201ENST00000561638 ANKRD45Q5TZF3 282 aa28.78■■■□□ 2.2
TMEM249-201ENST00000561638 RHPN1Q8TCX5 695 aa28.78■■■□□ 2.2
TMEM249-201ENST00000561638 ANKIB1Q9P2G1 1089 aa28.78■■■□□ 2.2
TMEM249-201ENST00000561638 ATP6V0A2Q9Y487 856 aa28.78■■■□□ 2.2
TMEM249-201ENST00000561638 TFCP2Q12800 502 aa28.77■■■□□ 2.2
TMEM249-201ENST00000561638 HELBQ8NG08 1087 aaPredicted RBP28.77■■■□□ 2.2
TMEM249-201ENST00000561638 SASH1O94885 1247 aa28.76■■■□□ 2.19
TMEM249-201ENST00000561638 SP8Q8IXZ3 490 aa28.75■■■□□ 2.19
TMEM249-201ENST00000561638 ANKRD2Q9GZV1 360 aa28.75■■■□□ 2.19
TMEM249-201ENST00000561638 IL1RAPL2Q9NP60 686 aa28.75■■■□□ 2.19
TMEM249-201ENST00000561638 SLX4Q8IY92 1834 aa28.75■■■□□ 2.19
TMEM249-201ENST00000561638 TAF5LO75529 589 aa28.74■■■□□ 2.19
TMEM249-201ENST00000561638 NSFL1CQ9UNZ2 370 aaKnown RBP28.74■■■□□ 2.19
TMEM249-201ENST00000561638 BCS1LQ9Y276 419 aa28.74■■■□□ 2.19
TMEM249-201ENST00000561638 C21orf2O43822 256 aa28.73■■■□□ 2.19
TMEM249-201ENST00000561638 SMARCA5O60264 1052 aaPredicted RBP28.73■■■□□ 2.19
TMEM249-201ENST00000561638 PDE8BO95263 885 aa28.73■■■□□ 2.19
TMEM249-201ENST00000561638 SLC51AQ86UW1 340 aa28.73■■■□□ 2.19
TMEM249-201ENST00000561638 KCNJ4P48050 445 aa28.73■■■□□ 2.19
TMEM249-201ENST00000561638 OLFM4Q6UX06 510 aa28.73■■■□□ 2.19
TMEM249-201ENST00000561638 CLASRPQ8N2M8 674 aaKnown RBP28.73■■■□□ 2.19
TMEM249-201ENST00000561638 XDHP47989 1333 aa28.72■■■□□ 2.19
TMEM249-201ENST00000561638 AKAP2Q9Y2D5 859 aa28.72■■■□□ 2.19
TMEM249-201ENST00000561638 NUCB1Q02818 461 aa28.7■■■□□ 2.19
TMEM249-201ENST00000561638 PUM3Q15397 648 aaKnown RBP28.7■■■□□ 2.19
TMEM249-201ENST00000561638 VGLL2Q8N8G2 317 aa28.7■■■□□ 2.19
TMEM249-201ENST00000561638 LNPKQ9C0E8 428 aa28.7■■■□□ 2.19
TMEM249-201ENST00000561638 BRCA1P38398 1863 aaKnown RBP28.7■■■□□ 2.18
TMEM249-201ENST00000561638 GPSM2P81274 684 aa28.7■■■□□ 2.18
TMEM249-201ENST00000561638 CHD1LQ86WJ1 897 aa28.7■■■□□ 2.18
TMEM249-201ENST00000561638 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.7■■■□□ 2.18
TMEM249-201ENST00000561638 ATP2B3Q16720 1220 aa28.69■■■□□ 2.18
TMEM249-201ENST00000561638 CC2D2BQ6DHV5 1058 aa28.69■■■□□ 2.18
TMEM249-201ENST00000561638 DPP8Q6V1X1 898 aaPredicted RBP28.69■■■□□ 2.18
TMEM249-201ENST00000561638 AACSQ86V21 672 aa28.69■■■□□ 2.18
TMEM249-201ENST00000561638 LRRC37AA6NMS7 1700 aa28.69■■■□□ 2.18
TMEM249-201ENST00000561638 TNNI3KQ59H18 835 aa28.68■■■□□ 2.18
TMEM249-201ENST00000561638 SOGA3Q5TF21 947 aa28.68■■■□□ 2.18
TMEM249-201ENST00000561638 MPNDQ8N594 471 aa28.68■■■□□ 2.18
TMEM249-201ENST00000561638 C7orf43Q8WVR3 580 aa28.68■■■□□ 2.18
TMEM249-201ENST00000561638 FPGT-TNNI3KV9GXZ4 949 aa28.68■■■□□ 2.18
TMEM249-201ENST00000561638 CCDC93Q567U6 631 aa28.67■■■□□ 2.18
TMEM249-201ENST00000561638 NEUROD6Q96NK8 337 aa28.67■■■□□ 2.18
TMEM249-201ENST00000561638 GGA1Q9UJY5 639 aa28.67■■■□□ 2.18
TMEM249-201ENST00000561638 A0A1B0GUL7 405 aa28.66■■■□□ 2.18
TMEM249-201ENST00000561638 SNAP23O00161 211 aa28.66■■■□□ 2.18
TMEM249-201ENST00000561638 UFL1O94874 794 aa28.66■■■□□ 2.18
TMEM249-201ENST00000561638 IFIT2P09913 472 aaKnown RBP28.66■■■□□ 2.18
TMEM249-201ENST00000561638 GPR108Q9NPR9 543 aa28.66■■■□□ 2.18
TMEM249-201ENST00000561638 ZNF804BA4D1E1 1349 aa28.66■■■□□ 2.18
TMEM249-201ENST00000561638 C6orf229H3BNL8 230 aa28.65■■■□□ 2.18
TMEM249-201ENST00000561638 SLC5A1P13866 664 aa28.65■■■□□ 2.18
TMEM249-201ENST00000561638 LPIN2Q92539 896 aa28.65■■■□□ 2.18
TMEM249-201ENST00000561638 PODXL2Q9NZ53 605 aa28.65■■■□□ 2.18
TMEM249-201ENST00000561638 LEMD3Q9Y2U8 911 aa28.65■■■□□ 2.18
TMEM249-201ENST00000561638 IFIT1P09914 478 aaKnown RBP28.65■■■□□ 2.18
TMEM249-201ENST00000561638 TIMM10P62072 90 aa28.65■■■□□ 2.18
TMEM249-201ENST00000561638 GRIPAP1Q4V328 841 aa28.65■■■□□ 2.18
TMEM249-201ENST00000561638 EAF2Q96CJ1 260 aaPredicted RBP28.65■■■□□ 2.18
TMEM249-201ENST00000561638 ZNF609O15014 1411 aa28.65■■■□□ 2.18
TMEM249-201ENST00000561638 ATP2B4P23634 1241 aa28.64■■■□□ 2.18
TMEM249-201ENST00000561638 UBE4AQ14139 1066 aa28.64■■■□□ 2.18
TMEM249-201ENST00000561638 RTKN2Q8IZC4 609 aa28.64■■■□□ 2.18
TMEM249-201ENST00000561638 A0A1B0GUL6 1792 aa28.64■■■□□ 2.17
TMEM249-201ENST00000561638 CCDC8Q9H0W5 538 aaPredicted RBP28.63■■■□□ 2.17
TMEM249-201ENST00000561638 GORABQ5T7V8 394 aa28.62■■■□□ 2.17
TMEM249-201ENST00000561638 TBC1D16Q8TBP0 767 aa28.62■■■□□ 2.17
TMEM249-201ENST00000561638 WTIPA6NIX2 430 aaPredicted RBP28.62■■■□□ 2.17
TMEM249-201ENST00000561638 FGFR2P21802 821 aa28.61■■■□□ 2.17
TMEM249-201ENST00000561638 C16orf71Q8IYS4 520 aaPredicted RBP28.61■■■□□ 2.17
TMEM249-201ENST00000561638 POLLQ9UGP5 575 aa28.61■■■□□ 2.17
TMEM249-201ENST00000561638 XAGE2Q96GT9 111 aa28.6■■■□□ 2.17
TMEM249-201ENST00000561638 TLR7Q9NYK1 1049 aaKnown RBP28.6■■■□□ 2.17
TMEM249-201ENST00000561638 GPR101Q96P66 508 aaPredicted RBP28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms