RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 RIMBP2O15034 1052 aa30.21■■■□□ 2.43
CDR2-202ENST00000561630 UFL1O94874 794 aa30.21■■■□□ 2.43
CDR2-202ENST00000561630 CT47B1P0C2W7 299 aaPredicted RBP30.21■■■□□ 2.43
CDR2-202ENST00000561630 EAPPQ56P03 285 aaPredicted RBP30.21■■■□□ 2.43
CDR2-202ENST00000561630 XDHP47989 1333 aa30.21■■■□□ 2.43
CDR2-202ENST00000561630 RAD17O75943 681 aa30.2■■■□□ 2.43
CDR2-202ENST00000561630 ITGA6P23229 1130 aa30.2■■■□□ 2.43
CDR2-202ENST00000561630 TNIP1Q15025 636 aa30.2■■■□□ 2.43
CDR2-202ENST00000561630 FAM161AQ3B820 660 aa30.2■■■□□ 2.43
CDR2-202ENST00000561630 FOXO4P98177 505 aa30.19■■■□□ 2.42
CDR2-202ENST00000561630 GPR101Q96P66 508 aaPredicted RBP30.19■■■□□ 2.42
CDR2-202ENST00000561630 BCL2L13Q9BXK5 485 aa30.19■■■□□ 2.42
CDR2-202ENST00000561630 ZC3H12CQ9C0D7 883 aaKnown RBP30.19■■■□□ 2.42
CDR2-202ENST00000561630 DBNDD1Q9H9R9 158 aa30.19■■■□□ 2.42
CDR2-202ENST00000561630 C9orf78Q9NZ63 289 aaPredicted RBP30.19■■■□□ 2.42
CDR2-202ENST00000561630 MINPP1Q9UNW1 487 aa30.19■■■□□ 2.42
CDR2-202ENST00000561630 IGHMBP2P38935 993 aaKnown RBP30.18■■■□□ 2.42
CDR2-202ENST00000561630 EPS15P42566 896 aa30.18■■■□□ 2.42
CDR2-202ENST00000561630 GPRC5DQ9NZD1 345 aa30.17■■■□□ 2.42
CDR2-202ENST00000561630 MYH3P11055 1940 aa30.16■■■□□ 2.42
CDR2-202ENST00000561630 ATP2B4P23634 1241 aa30.16■■■□□ 2.42
CDR2-202ENST00000561630 GMPSP49915 693 aaPredicted RBP30.16■■■□□ 2.42
CDR2-202ENST00000561630 DOK7Q18PE1 504 aa30.16■■■□□ 2.42
CDR2-202ENST00000561630 DNAJC5GQ8N7S2 189 aa30.16■■■□□ 2.42
CDR2-202ENST00000561630 SMC4Q9NTJ3 1288 aa30.16■■■□□ 2.42
CDR2-202ENST00000561630 ECE2O60344 883 aa30.15■■■□□ 2.42
CDR2-202ENST00000561630 HTRA3P83110 453 aa30.15■■■□□ 2.42
CDR2-202ENST00000561630 CLEC11AQ9Y240 323 aa30.15■■■□□ 2.42
CDR2-202ENST00000561630 EPHA10Q5JZY3 1008 aa30.14■■■□□ 2.42
CDR2-202ENST00000561630 MPHOSPH8Q99549 860 aa30.14■■■□□ 2.42
CDR2-202ENST00000561630 ANKRD18BA2A2Z9 1011 aa30.13■■■□□ 2.41
CDR2-202ENST00000561630 LMBR1LQ6UX01 489 aa30.13■■■□□ 2.41
CDR2-202ENST00000561630 USP50Q70EL3 339 aaPredicted RBP30.13■■■□□ 2.41
CDR2-202ENST00000561630 IFIT5Q13325 482 aaKnown RBP30.12■■■□□ 2.41
CDR2-202ENST00000561630 ADARB2Q9NS39 739 aaKnown RBP30.12■■■□□ 2.41
CDR2-202ENST00000561630 UTYO14607 1347 aa30.12■■■□□ 2.41
CDR2-202ENST00000561630 ADAMTSL1Q8N6G6 1762 aa30.12■■■□□ 2.41
CDR2-202ENST00000561630 PSMD14O00487 310 aa30.11■■■□□ 2.41
CDR2-202ENST00000561630 KCNQ5Q9NR82 932 aa30.11■■■□□ 2.41
CDR2-202ENST00000561630 CHMP3Q9Y3E7 222 aa30.11■■■□□ 2.41
CDR2-202ENST00000561630 WTIPA6NIX2 430 aaPredicted RBP30.1■■■□□ 2.41
CDR2-202ENST00000561630 G3V3G9 751 aa30.1■■■□□ 2.41
CDR2-202ENST00000561630 ITGBL1O95965 494 aaPredicted RBP30.1■■■□□ 2.41
CDR2-202ENST00000561630 NBPF7P0C2Y1 421 aaPredicted RBP30.1■■■□□ 2.41
CDR2-202ENST00000561630 CCT4P50991 539 aaKnown RBP30.1■■■□□ 2.41
CDR2-202ENST00000561630 BRPF1P55201 1214 aaPredicted RBP30.1■■■□□ 2.41
CDR2-202ENST00000561630 DCAF8Q5TAQ9 597 aa30.1■■■□□ 2.41
CDR2-202ENST00000561630 ANKRD2Q9GZV1 360 aa30.1■■■□□ 2.41
CDR2-202ENST00000561630 PASKQ96RG2 1323 aa30.1■■■□□ 2.41
CDR2-202ENST00000561630 DPF2Q92785 391 aa30.09■■■□□ 2.41
CDR2-202ENST00000561630 LEMD3Q9Y2U8 911 aa30.09■■■□□ 2.41
CDR2-202ENST00000561630 MAP1SQ66K74 1059 aaPredicted RBP30.08■■■□□ 2.41
CDR2-202ENST00000561630 CNTROBQ8N137 903 aa30.08■■■□□ 2.41
CDR2-202ENST00000561630 KAZALD1Q96I82 304 aa30.08■■■□□ 2.41
CDR2-202ENST00000561630 SUCLG2Q96I99 432 aa30.08■■■□□ 2.41
CDR2-202ENST00000561630 ZBTB12Q9Y330 459 aaPredicted RBP30.08■■■□□ 2.41
CDR2-202ENST00000561630 MED23Q9ULK4 1368 aa30.07■■■□□ 2.4
CDR2-202ENST00000561630 HNRNPUQ00839 825 aaKnown RBP eCLIP30.07■■■□□ 2.4
CDR2-202ENST00000561630 CCDC57Q2TAC2 916 aa30.07■■■□□ 2.4
CDR2-202ENST00000561630 CNOT7Q9UIV1 285 aaKnown RBP30.07■■■□□ 2.4
CDR2-202ENST00000561630 RPS12P25398 132 aaKnown RBP30.06■■■□□ 2.4
CDR2-202ENST00000561630 RARSP54136 660 aaKnown RBP30.06■■■□□ 2.4
CDR2-202ENST00000561630 CHRNDQ07001 517 aa30.06■■■□□ 2.4
CDR2-202ENST00000561630 VIL1P09327 827 aaKnown RBP30.05■■■□□ 2.4
CDR2-202ENST00000561630 PODNQ7Z5L7 613 aa30.05■■■□□ 2.4
CDR2-202ENST00000561630 KLRG1Q96E93 195 aa30.05■■■□□ 2.4
CDR2-202ENST00000561630 NOB1Q9ULX3 412 aaKnown RBP30.05■■■□□ 2.4
CDR2-202ENST00000561630 ZNF804BA4D1E1 1349 aa30.04■■■□□ 2.4
CDR2-202ENST00000561630 MICALL2Q8IY33 904 aa30.04■■■□□ 2.4
CDR2-202ENST00000561630 USP44Q9H0E7 712 aa30.04■■■□□ 2.4
CDR2-202ENST00000561630 CREBZFQ9NS37 354 aa30.04■■■□□ 2.4
CDR2-202ENST00000561630 H7C1D1 291 aa30.03■■■□□ 2.4
CDR2-202ENST00000561630 SPEF2Q9C093 1822 aa30.02■■■□□ 2.4
CDR2-202ENST00000561630 SHTN1A0MZ66 631 aa30.02■■■□□ 2.4
CDR2-202ENST00000561630 RABL6Q3YEC7 729 aaPredicted RBP30.02■■■□□ 2.4
CDR2-202ENST00000561630 BICC1Q9H694 974 aaKnown RBP30.02■■■□□ 2.4
CDR2-202ENST00000561630 TAF7LQ5H9L4 462 aa30.01■■■□□ 2.39
CDR2-202ENST00000561630 LDHAL6AQ6ZMR3 332 aa30.01■■■□□ 2.39
CDR2-202ENST00000561630 TXNRD3Q86VQ6 643 aa30.01■■■□□ 2.39
CDR2-202ENST00000561630 ZNF594Q96JF6 807 aaPredicted RBP30.01■■■□□ 2.39
CDR2-202ENST00000561630 API5Q9BZZ5 524 aaKnown RBP30.01■■■□□ 2.39
CDR2-202ENST00000561630 HIRAP54198 1017 aaPredicted RBP30■■■□□ 2.39
CDR2-202ENST00000561630 TRPM4Q8TD43 1214 aa30■■■□□ 2.39
CDR2-202ENST00000561630 ZC3H15Q8WU90 426 aaKnown RBP30■■■□□ 2.39
CDR2-202ENST00000561630 COA1Q9GZY4 146 aa30■■■□□ 2.39
CDR2-202ENST00000561630 PGAP2Q9UHJ9 254 aa30■■■□□ 2.39
CDR2-202ENST00000561630 KCNJ4P48050 445 aa29.99■■■□□ 2.39
CDR2-202ENST00000561630 ANKRD44Q8N8A2 993 aa29.99■■■□□ 2.39
CDR2-202ENST00000561630 ZNF609O15014 1411 aa29.98■■■□□ 2.39
CDR2-202ENST00000561630 USP17L3A6NCW0 530 aa29.98■■■□□ 2.39
CDR2-202ENST00000561630 USP17L4A6NCW7 530 aa29.98■■■□□ 2.39
CDR2-202ENST00000561630 TAF5LO75529 589 aa29.98■■■□□ 2.39
CDR2-202ENST00000561630 KLRK1P26718 216 aa29.98■■■□□ 2.39
CDR2-202ENST00000561630 RSBN1LQ6PCB5 846 aaPredicted RBP29.98■■■□□ 2.39
CDR2-202ENST00000561630 USP17L1Q7RTZ2 530 aa29.98■■■□□ 2.39
CDR2-202ENST00000561630 HELBQ8NG08 1087 aaPredicted RBP29.98■■■□□ 2.39
CDR2-202ENST00000561630 KIF16BQ96L93 1317 aa29.97■■■□□ 2.39
CDR2-202ENST00000561630 SCN9AQ15858 1988 aa29.97■■■□□ 2.39
CDR2-202ENST00000561630 TMEM88BA6NKF7 163 aa29.97■■■□□ 2.39
CDR2-202ENST00000561630 AGBL3Q8NEM8 1001 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms