RNA–Protein interactions for RNA: ENST00000561405.1

UBE2CP4-201, Transcript of ubiquitin conjugating enzyme E2 C pseudogene 4, humanhuman

BASIC

Gene UBE2CP4, Length 535 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2CP4-201ENST00000561405 LINS1Q8NG48 757 aa9.48□□□□□ -0.89
UBE2CP4-201ENST00000561405 DNAAF4Q8WXU2 420 aa9.48□□□□□ -0.89
UBE2CP4-201ENST00000561405 PLA2G12BQ9BX93 195 aa9.48□□□□□ -0.89
UBE2CP4-201ENST00000561405 TMX4Q9H1E5 349 aaPredicted RBP9.48□□□□□ -0.89
UBE2CP4-201ENST00000561405 RTL9Q8NET4 1388 aa9.48□□□□□ -0.89
UBE2CP4-201ENST00000561405 ECM2O94769 699 aaPredicted RBP9.47□□□□□ -0.89
UBE2CP4-201ENST00000561405 CASP7P55210 303 aa9.47□□□□□ -0.89
UBE2CP4-201ENST00000561405 RPS8P62241 208 aaKnown RBP9.47□□□□□ -0.89
UBE2CP4-201ENST00000561405 KIAA2012Q0VF49 1180 aa9.47□□□□□ -0.89
UBE2CP4-201ENST00000561405 FKBP5Q13451 457 aaPredicted RBP9.47□□□□□ -0.89
UBE2CP4-201ENST00000561405 GCKRQ14397 625 aa9.47□□□□□ -0.89
UBE2CP4-201ENST00000561405 CWF19L2Q2TBE0 894 aaKnown RBP9.47□□□□□ -0.89
UBE2CP4-201ENST00000561405 CCDC152Q4G0S7 254 aa9.47□□□□□ -0.89
UBE2CP4-201ENST00000561405 DPP8Q6V1X1 898 aaPredicted RBP9.47□□□□□ -0.89
UBE2CP4-201ENST00000561405 TRMT2AQ8IZ69 625 aaKnown RBP9.47□□□□□ -0.89
UBE2CP4-201ENST00000561405 GPC2Q8N158 579 aa9.47□□□□□ -0.89
UBE2CP4-201ENST00000561405 LARGE2Q8N3Y3 721 aa9.47□□□□□ -0.89
UBE2CP4-201ENST00000561405 MPNDQ8N594 471 aa9.47□□□□□ -0.89
UBE2CP4-201ENST00000561405 SMC1BQ8NDV3 1235 aa9.47□□□□□ -0.89
UBE2CP4-201ENST00000561405 JDP2Q8WYK2 163 aa9.47□□□□□ -0.89
UBE2CP4-201ENST00000561405 RNF25Q96BH1 459 aaPredicted RBP9.47□□□□□ -0.89
UBE2CP4-201ENST00000561405 IQCA1LA6NCM1 817 aa9.46□□□□□ -0.9
UBE2CP4-201ENST00000561405 PPIP5K2O43314 1243 aa9.46□□□□□ -0.9
UBE2CP4-201ENST00000561405 APLP1P51693 650 aa9.46□□□□□ -0.9
UBE2CP4-201ENST00000561405 CTSWP56202 376 aa9.46□□□□□ -0.9
UBE2CP4-201ENST00000561405 AOC3Q16853 763 aa9.46□□□□□ -0.9
UBE2CP4-201ENST00000561405 BEND3Q5T5X7 828 aa9.46□□□□□ -0.9
UBE2CP4-201ENST00000561405 IFNL1Q8IU54 200 aa9.46□□□□□ -0.9
UBE2CP4-201ENST00000561405 TTLL11Q8NHH1 800 aa9.46□□□□□ -0.9
UBE2CP4-201ENST00000561405 JARID2Q92833 1246 aaPredicted RBP9.46□□□□□ -0.9
UBE2CP4-201ENST00000561405 TAF1DQ9H5J8 278 aaPredicted RBP9.46□□□□□ -0.9
UBE2CP4-201ENST00000561405 SEC31BQ9NQW1 1179 aa9.46□□□□□ -0.9
UBE2CP4-201ENST00000561405 PODXL2Q9NZ53 605 aa9.46□□□□□ -0.9
UBE2CP4-201ENST00000561405 PCDHB13Q9Y5F0 798 aa9.46□□□□□ -0.9
UBE2CP4-201ENST00000561405 ADAMTSL1Q8N6G6 1762 aa9.45□□□□□ -0.9
UBE2CP4-201ENST00000561405 CSF1RP07333 972 aa9.45□□□□□ -0.9
UBE2CP4-201ENST00000561405 CLCN6P51797 869 aa9.45□□□□□ -0.9
UBE2CP4-201ENST00000561405 EIF6P56537 245 aaKnown RBP9.45□□□□□ -0.9
UBE2CP4-201ENST00000561405 NIM1KQ8IY84 436 aa9.45□□□□□ -0.9
UBE2CP4-201ENST00000561405 ZNRF3Q9ULT6 936 aa9.45□□□□□ -0.9
UBE2CP4-201ENST00000561405 TRPC6Q9Y210 931 aa9.45□□□□□ -0.9
UBE2CP4-201ENST00000561405 F6X3S4 739 aa9.44□□□□□ -0.9
UBE2CP4-201ENST00000561405 GPSM2P81274 684 aa9.44□□□□□ -0.9
UBE2CP4-201ENST00000561405 UBE3BQ7Z3V4 1068 aa9.44□□□□□ -0.9
UBE2CP4-201ENST00000561405 MRPL50Q8N5N7 158 aaKnown RBP9.44□□□□□ -0.9
UBE2CP4-201ENST00000561405 CDCA7LQ96GN5 454 aa9.44□□□□□ -0.9
UBE2CP4-201ENST00000561405 POLLQ9UGP5 575 aa9.44□□□□□ -0.9
UBE2CP4-201ENST00000561405 HACL1Q9UJ83 578 aa9.44□□□□□ -0.9
UBE2CP4-201ENST00000561405 PCDHB8Q9UN66 801 aa9.44□□□□□ -0.9
UBE2CP4-201ENST00000561405 YDJCA8MPS7 323 aa9.43□□□□□ -0.9
UBE2CP4-201ENST00000561405 ALDH1L1O75891 902 aa9.43□□□□□ -0.9
UBE2CP4-201ENST00000561405 CT47B1P0C2W7 299 aaPredicted RBP9.43□□□□□ -0.9
UBE2CP4-201ENST00000561405 POTEIP0CG38 1075 aa9.43□□□□□ -0.9
UBE2CP4-201ENST00000561405 POTEJP0CG39 1038 aa9.43□□□□□ -0.9
UBE2CP4-201ENST00000561405 EPHX2P34913 555 aa9.43□□□□□ -0.9
UBE2CP4-201ENST00000561405 SCNN1DP51172 638 aa9.43□□□□□ -0.9
UBE2CP4-201ENST00000561405 CXCL9Q07325 125 aa9.43□□□□□ -0.9
UBE2CP4-201ENST00000561405 LDHDQ86WU2 507 aa9.43□□□□□ -0.9
UBE2CP4-201ENST00000561405 ANKRD18AQ8IVF6 992 aa9.43□□□□□ -0.9
UBE2CP4-201ENST00000561405 DNAJC5GQ8N7S2 189 aa9.43□□□□□ -0.9
UBE2CP4-201ENST00000561405 TBC1D16Q8TBP0 767 aa9.43□□□□□ -0.9
UBE2CP4-201ENST00000561405 CDC5LQ99459 802 aaKnown RBP9.43□□□□□ -0.9
UBE2CP4-201ENST00000561405 GREM2Q9H772 168 aa9.43□□□□□ -0.9
UBE2CP4-201ENST00000561405 BSDC1Q9NW68 430 aaPredicted RBP9.43□□□□□ -0.9
UBE2CP4-201ENST00000561405 NSFL1CQ9UNZ2 370 aaKnown RBP9.43□□□□□ -0.9
UBE2CP4-201ENST00000561405 PTPRCP08575 1304 aa9.42□□□□□ -0.9
UBE2CP4-201ENST00000561405 WASHC4Q2M389 1173 aa9.42□□□□□ -0.9
UBE2CP4-201ENST00000561405 ALDH1L2Q3SY69 923 aa9.42□□□□□ -0.9
UBE2CP4-201ENST00000561405 DIEXFQ68CQ4 756 aaKnown RBP9.42□□□□□ -0.9
UBE2CP4-201ENST00000561405 PNMA8AQ86V59 439 aaPredicted RBP9.42□□□□□ -0.9
UBE2CP4-201ENST00000561405 SSH1Q8WYL5 1049 aa9.42□□□□□ -0.9
UBE2CP4-201ENST00000561405 CCDC85AQ96PX6 553 aaPredicted RBP9.42□□□□□ -0.9
UBE2CP4-201ENST00000561405 EYA3Q99504 573 aa9.42□□□□□ -0.9
UBE2CP4-201ENST00000561405 SCN9AQ15858 1988 aa9.42□□□□□ -0.9
UBE2CP4-201ENST00000561405 UTYO14607 1347 aa9.41□□□□□ -0.9
UBE2CP4-201ENST00000561405 XDHP47989 1333 aa9.41□□□□□ -0.9
UBE2CP4-201ENST00000561405 PASKQ96RG2 1323 aa9.41□□□□□ -0.9
UBE2CP4-201ENST00000561405 GRM8O00222 908 aa9.41□□□□□ -0.9
UBE2CP4-201ENST00000561405 EPS15P42566 896 aa9.41□□□□□ -0.9
UBE2CP4-201ENST00000561405 BRPF1P55201 1214 aaPredicted RBP9.41□□□□□ -0.9
UBE2CP4-201ENST00000561405 FOXO4P98177 505 aa9.41□□□□□ -0.9
UBE2CP4-201ENST00000561405 TNIP1Q15025 636 aa9.41□□□□□ -0.9
UBE2CP4-201ENST00000561405 CIAPIN1Q6FI81 312 aa9.41□□□□□ -0.9
UBE2CP4-201ENST00000561405 GPRC5DQ9NZD1 345 aa9.41□□□□□ -0.9
UBE2CP4-201ENST00000561405 MINPP1Q9UNW1 487 aa9.41□□□□□ -0.9
UBE2CP4-201ENST00000561405 GJA3Q9Y6H8 435 aa9.41□□□□□ -0.9
UBE2CP4-201ENST00000561405 ZNF609O15014 1411 aa9.4□□□□□ -0.9
UBE2CP4-201ENST00000561405 PSME4Q14997 1843 aa9.4□□□□□ -0.9
UBE2CP4-201ENST00000561405 SPEF2Q9C093 1822 aa9.4□□□□□ -0.9
UBE2CP4-201ENST00000561405 C6orf229H3BNL8 230 aa9.4□□□□□ -0.9
UBE2CP4-201ENST00000561405 UFL1O94874 794 aa9.4□□□□□ -0.9
UBE2CP4-201ENST00000561405 ITGBL1O95965 494 aaPredicted RBP9.4□□□□□ -0.9
UBE2CP4-201ENST00000561405 ITGA6P23229 1130 aa9.4□□□□□ -0.9
UBE2CP4-201ENST00000561405 ATP2B4P23634 1241 aa9.4□□□□□ -0.9
UBE2CP4-201ENST00000561405 LMOD1P29536 600 aaPredicted RBP9.4□□□□□ -0.9
UBE2CP4-201ENST00000561405 FAM161AQ3B820 660 aa9.4□□□□□ -0.9
UBE2CP4-201ENST00000561405 USP50Q70EL3 339 aaPredicted RBP9.4□□□□□ -0.9
UBE2CP4-201ENST00000561405 SRCIN1Q9C0H9 1055 aa9.4□□□□□ -0.9
UBE2CP4-201ENST00000561405 ANKIB1Q9P2G1 1089 aa9.4□□□□□ -0.9
UBE2CP4-201ENST00000561405 GGA1Q9UJY5 639 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms